Wall clock time and date at job start Tue Mar 9 2021 12:59:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35991 * 116.99952 * 2 1 4 4 C 1.39160 * 120.07371 * 180.02562 * 3 2 1 5 5 O 1.35991 * 120.07265 * 0.02562 * 4 3 2 6 6 C 1.42898 * 117.00143 * 179.97438 * 5 4 3 7 7 C 1.50703 * 109.47171 * 180.02562 * 6 5 4 8 8 O 1.21278 * 119.99985 * 359.97438 * 7 6 5 9 9 N 1.34777 * 120.00161 * 180.02562 * 7 6 5 10 10 C 1.46496 * 120.00271 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.84879 * 334.65982 * 10 9 7 12 12 C 1.53783 * 113.61576 * 105.86138 * 10 9 7 13 13 C 1.54045 * 86.98565 * 89.16097 * 12 10 9 14 14 H 1.08996 * 113.69153 * 270.87323 * 13 12 10 15 15 O 1.42905 * 113.61935 * 139.97993 * 13 12 10 16 16 C 1.42895 * 114.00129 * 112.50175 * 15 13 12 17 17 C 1.53779 * 113.61539 * 203.46979 * 10 9 7 18 18 C 1.38562 * 119.85550 * 180.30068 * 4 3 2 19 19 C 1.38250 * 119.99713 * 359.47061 * 18 4 3 20 20 C 1.38253 * 120.14684 * 0.50729 * 19 18 4 21 21 C 1.50693 * 119.92646 * 179.74764 * 20 19 18 22 22 O 1.42898 * 109.47404 * 245.02096 * 21 20 19 23 23 Si 1.86302 * 109.47402 * 5.02294 * 21 20 19 24 24 C 1.38239 * 120.14594 * 359.76690 * 20 19 18 25 25 H 1.09002 * 109.46994 * 179.97438 * 1 2 3 26 26 H 1.09008 * 109.46970 * 299.99282 * 1 2 3 27 27 H 1.08999 * 109.47242 * 59.99302 * 1 2 3 28 28 H 1.09002 * 109.47259 * 300.00512 * 6 5 4 29 29 H 1.09001 * 109.47074 * 60.00533 * 6 5 4 30 30 H 0.97005 * 119.99463 * 359.97438 * 9 7 6 31 31 H 1.08995 * 113.61142 * 203.66722 * 12 10 9 32 32 H 1.08994 * 113.61229 * 334.56550 * 12 10 9 33 33 H 1.09000 * 109.47285 * 179.97438 * 16 15 13 34 34 H 1.09001 * 109.47110 * 300.00256 * 16 15 13 35 35 H 1.09002 * 109.47121 * 60.00216 * 16 15 13 36 36 H 1.09006 * 113.61755 * 25.42826 * 17 10 9 37 37 H 1.08999 * 113.61692 * 156.25184 * 17 10 9 38 38 H 1.07998 * 120.00300 * 179.70387 * 18 4 3 39 39 H 1.07997 * 119.92389 * 180.25638 * 19 18 4 40 40 H 1.08999 * 109.47261 * 125.02075 * 21 20 19 41 41 H 0.96704 * 113.99548 * 59.99654 * 22 21 20 42 42 H 1.48498 * 110.00098 * 179.97438 * 23 21 20 43 43 H 1.48500 * 109.99594 * 301.32084 * 23 21 20 44 44 H 1.07996 * 120.00048 * 179.97438 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0016 6 6 5.6003 0.3007 -0.0027 7 6 6.2519 -1.0582 -0.0044 8 8 5.5670 -2.0591 -0.0042 9 7 7.5957 -1.1612 -0.0051 10 6 8.2291 -2.4822 -0.0073 11 1 7.5937 -3.2570 0.4217 12 6 8.8421 -2.8691 -1.3635 13 6 10.1375 -2.1900 -0.8799 14 1 10.1893 -1.1272 -1.1164 15 8 11.3248 -2.8977 -1.2425 16 6 12.1421 -2.2127 -2.1937 17 6 9.6610 -2.4797 0.5533 18 6 4.0603 2.5233 0.0058 19 6 3.3029 3.6799 0.0015 20 6 1.9223 3.6057 0.0016 21 6 1.1016 4.8696 0.0027 22 8 0.3651 4.9583 1.2240 23 14 2.2308 6.3435 -0.1500 24 6 1.2932 2.3748 0.0010 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 5.9058 0.8509 -0.8926 29 1 5.9072 0.8500 0.8874 30 1 8.1434 -0.3606 -0.0049 31 1 8.9406 -3.9451 -1.5070 32 1 8.3757 -2.3689 -2.2121 33 1 13.0231 -2.8148 -2.4161 34 1 11.5738 -2.0478 -3.1091 35 1 12.4531 -1.2529 -1.7812 36 1 9.8554 -1.6651 1.2511 37 1 9.9826 -3.4490 0.9341 38 1 5.1385 2.5840 0.0102 39 1 3.7908 4.6433 0.0023 40 1 0.4091 4.8538 -0.8389 41 1 0.9188 4.9768 2.0167 42 1 1.4334 7.5963 -0.1507 43 1 3.2007 6.3588 0.9744 44 1 0.2146 2.3197 0.0014 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:42 Heat of formation + Delta-G solvation = -117.557730 kcal Electronic energy + Delta-G solvation = -27055.184949 eV Core-core repulsion = 22941.848256 eV Total energy + Delta-G solvation = -4113.336693 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.86359 -41.32616 -40.07548 -39.19062 -38.90265 -37.32305 -36.99706 -34.18638 -32.03634 -31.45886 -29.62705 -28.46413 -27.70044 -26.77683 -26.23289 -25.05070 -23.60391 -22.62130 -21.90118 -20.67928 -19.82470 -18.60383 -18.52354 -18.07582 -17.74681 -17.51880 -17.10528 -16.82918 -16.69674 -16.51883 -16.13459 -16.06071 -15.85364 -15.80406 -15.42465 -15.34177 -14.73595 -14.33628 -14.15085 -13.79859 -13.72659 -13.58243 -13.48488 -13.43015 -13.31007 -12.63095 -12.58737 -12.20248 -12.15689 -12.13794 -11.99948 -11.96038 -11.62397 -11.54642 -11.05705 -10.60899 -10.46817 -10.21617 -9.78877 -8.92461 -4.88008 0.16656 0.27807 1.33626 1.40400 1.42863 1.63527 1.99969 2.30842 2.53113 2.55297 2.88343 3.41136 3.42145 3.47653 3.53689 3.66067 3.80165 3.85569 3.89586 3.95786 4.04282 4.11493 4.14190 4.28071 4.30296 4.35751 4.38686 4.49638 4.56729 4.57120 4.64446 4.65850 4.73634 4.74938 4.86065 4.92157 4.94149 4.99097 5.00823 5.12394 5.37103 5.42037 5.59360 5.96138 6.28926 6.37580 6.49562 6.53244 7.10356 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.335 6.335 3 C 0.076 3.924 4 C 0.086 3.914 5 O -0.315 6.315 6 C 0.036 3.964 7 C 0.515 3.485 8 O -0.571 6.571 9 N -0.692 5.692 10 C 0.119 3.881 11 H 0.086 0.914 12 C -0.169 4.169 13 C 0.063 3.937 14 H 0.112 0.888 15 O -0.402 6.402 16 C 0.023 3.977 17 C -0.132 4.132 18 C -0.159 4.159 19 C -0.111 4.111 20 C -0.115 4.115 21 C -0.086 4.086 22 O -0.551 6.551 23 Si 0.778 3.222 24 C -0.152 4.152 25 H 0.110 0.890 26 H 0.062 0.938 27 H 0.066 0.934 28 H 0.132 0.868 29 H 0.129 0.871 30 H 0.423 0.577 31 H 0.088 0.912 32 H 0.072 0.928 33 H 0.088 0.912 34 H 0.047 0.953 35 H 0.057 0.943 36 H 0.100 0.900 37 H 0.099 0.901 38 H 0.177 0.823 39 H 0.158 0.842 40 H 0.121 0.879 41 H 0.386 0.614 42 H -0.308 1.308 43 H -0.273 1.273 44 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.338 6.800 -1.977 9.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.030 3.970 4 C 0.040 3.960 5 O -0.229 6.229 6 C -0.042 4.042 7 C 0.301 3.699 8 O -0.449 6.449 9 N -0.346 5.346 10 C 0.013 3.987 11 H 0.104 0.896 12 C -0.208 4.208 13 C 0.006 3.994 14 H 0.130 0.870 15 O -0.321 6.321 16 C -0.073 4.073 17 C -0.170 4.170 18 C -0.177 4.177 19 C -0.129 4.129 20 C -0.116 4.116 21 C -0.194 4.194 22 O -0.359 6.359 23 Si 0.682 3.318 24 C -0.170 4.170 25 H 0.129 0.871 26 H 0.080 0.920 27 H 0.084 0.916 28 H 0.149 0.851 29 H 0.147 0.853 30 H 0.261 0.739 31 H 0.107 0.893 32 H 0.091 0.909 33 H 0.107 0.893 34 H 0.066 0.934 35 H 0.075 0.925 36 H 0.118 0.882 37 H 0.118 0.882 38 H 0.194 0.806 39 H 0.175 0.825 40 H 0.139 0.861 41 H 0.236 0.764 42 H -0.237 1.237 43 H -0.199 1.199 44 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 5.691 6.225 -1.942 8.655 hybrid contribution -0.596 -0.070 0.950 1.123 sum 5.095 6.155 -0.993 8.052 Atomic orbital electron populations 1.23281 0.76837 1.05181 1.02097 1.86190 1.22976 1.26655 1.89086 1.18689 0.89957 0.85615 1.02703 1.18587 0.88159 0.86517 1.02705 1.86221 1.18224 1.29122 1.89307 1.22773 0.79355 0.94807 1.07261 1.20626 0.82834 0.91001 0.75408 1.90782 1.64069 1.40282 1.49772 1.45316 1.05187 1.09329 1.74791 1.21551 0.93967 0.85568 0.97580 0.89582 1.24011 0.96741 1.02415 0.97660 1.23996 0.83347 0.96621 0.95463 0.86996 1.87930 1.35055 1.46935 1.62172 1.22956 0.94871 0.97871 0.91584 1.23540 0.91969 1.04921 0.96566 1.21382 1.02287 0.89260 1.04812 1.21049 0.92431 0.99118 1.00268 1.20112 0.94449 0.94677 1.02369 1.25319 1.02239 1.02290 0.89529 1.86574 1.37400 1.95602 1.16318 0.93963 0.77298 0.72308 0.88206 1.21020 1.00497 0.90550 1.04971 0.87147 0.91964 0.91550 0.85088 0.85336 0.73880 0.89308 0.90908 0.89308 0.93449 0.92476 0.88160 0.88229 0.80598 0.82489 0.86093 0.76449 1.23666 1.19890 0.84143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.16 16 2 O -0.33 -3.69 10.28 -79.58 -0.82 -4.51 16 3 C 0.08 0.59 6.70 22.57 0.15 0.74 16 4 C 0.09 0.43 6.70 22.57 0.15 0.58 16 5 O -0.32 -2.53 9.45 -67.03 -0.63 -3.17 16 6 C 0.04 -0.12 5.22 71.24 0.37 0.26 16 7 C 0.51 1.66 7.91 87.66 0.69 2.35 16 8 O -0.57 -9.24 16.12 16.01 0.26 -8.98 16 9 N -0.69 3.01 5.26 -440.05 -2.32 0.70 16 10 C 0.12 -0.09 4.30 45.52 0.20 0.11 16 11 H 0.09 0.43 7.50 -2.39 -0.02 0.42 16 12 C -0.17 0.07 7.73 31.21 0.24 0.31 16 13 C 0.06 -0.22 4.20 31.21 0.13 -0.09 16 14 H 0.11 -0.99 7.87 -2.39 -0.02 -1.01 16 15 O -0.40 -0.62 10.72 -148.98 -1.60 -2.21 16 16 C 0.02 -0.09 10.85 113.37 1.23 1.14 16 17 C -0.13 0.55 7.65 31.12 0.24 0.79 16 18 C -0.16 0.52 9.04 22.35 0.20 0.73 16 19 C -0.11 0.42 8.66 22.28 0.19 0.62 16 20 C -0.12 0.05 5.35 -19.86 -0.11 -0.06 16 21 C -0.09 0.15 2.80 71.23 0.20 0.34 16 22 O -0.55 -1.03 12.83 -148.98 -1.91 -2.94 16 23 Si 0.78 -3.46 29.88 68.60 2.05 -1.41 16 24 C -0.15 -0.52 8.67 22.35 0.19 -0.33 16 25 H 0.11 -0.01 8.14 -2.39 -0.02 -0.03 16 26 H 0.06 0.03 7.66 -2.38 -0.02 0.02 16 27 H 0.07 -0.02 7.66 -2.39 -0.02 -0.04 16 28 H 0.13 -1.43 7.68 -2.39 -0.02 -1.44 16 29 H 0.13 -1.35 7.65 -2.39 -0.02 -1.37 16 30 H 0.42 -5.48 8.70 -92.70 -0.81 -6.28 16 31 H 0.09 0.19 8.14 -2.39 -0.02 0.17 16 32 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 33 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 34 H 0.05 -0.23 8.14 -2.39 -0.02 -0.24 16 35 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 36 H 0.10 -0.81 8.14 -2.38 -0.02 -0.83 16 37 H 0.10 -0.22 8.14 -2.39 -0.02 -0.24 16 38 H 0.18 -2.07 6.30 -2.91 -0.02 -2.09 16 39 H 0.16 -1.44 4.83 -2.91 -0.01 -1.45 16 40 H 0.12 -0.34 7.96 -2.39 -0.02 -0.35 16 41 H 0.39 -1.47 8.70 -74.05 -0.64 -2.12 16 42 H -0.31 -1.27 7.11 99.48 0.71 -0.56 16 43 H -0.27 0.59 7.00 99.48 0.70 1.29 16 44 H 0.14 0.29 6.30 -2.91 -0.02 0.27 16 Total: 0.00 -30.44 368.19 -0.15 -30.60 By element: Atomic # 1 Polarization: -16.34 SS G_CDS: -0.38 Total: -16.72 kcal Atomic # 6 Polarization: 3.45 SS G_CDS: 5.20 Total: 8.64 kcal Atomic # 7 Polarization: 3.01 SS G_CDS: -2.32 Total: 0.70 kcal Atomic # 8 Polarization: -17.10 SS G_CDS: -4.70 Total: -21.81 kcal Atomic # 14 Polarization: -3.46 SS G_CDS: 2.05 Total: -1.41 kcal Total: -30.44 -0.15 -30.60 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.960 kcal (2) G-P(sol) polarization free energy of solvation -30.444 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.597 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds