Wall clock time and date at job start Tue Mar 9 2021 12:59:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42900 * 114.00244 * 2 1 4 4 H 1.09006 * 112.84977 * 341.19954 * 3 2 1 5 5 C 1.53779 * 113.69141 * 112.46673 * 3 2 1 6 6 C 1.53784 * 87.08045 * 139.99528 * 5 3 2 7 7 H 1.09004 * 113.61451 * 220.02152 * 6 5 3 8 8 N 1.46496 * 113.61524 * 89.11591 * 6 5 3 9 9 C 1.34776 * 120.00015 * 107.50411 * 8 6 5 10 10 O 1.21280 * 119.99898 * 359.97438 * 9 8 6 11 11 C 1.50704 * 120.00197 * 180.02562 * 9 8 6 12 12 N 1.46896 * 109.47166 * 179.97438 * 11 9 8 13 13 C 1.46904 * 111.00043 * 293.95105 * 12 11 9 14 14 C 1.39670 * 110.99916 * 170.00136 * 12 11 9 15 15 C 1.38892 * 120.07438 * 239.99537 * 14 12 11 16 16 C 1.50706 * 120.03379 * 0.02562 * 15 14 12 17 17 O 1.42897 * 109.46998 * 74.99913 * 16 15 14 18 18 Si 1.86304 * 109.46779 * 194.99634 * 16 15 14 19 19 C 1.38117 * 119.92786 * 179.97438 * 15 14 12 20 20 C 1.38269 * 120.07673 * 0.02562 * 19 15 14 21 21 C 1.50692 * 119.92883 * 179.97438 * 20 19 15 22 22 F 1.39899 * 109.47412 * 90.00217 * 21 20 19 23 23 F 1.39897 * 109.47307 * 210.00091 * 21 20 19 24 24 F 1.39905 * 109.47058 * 330.00006 * 21 20 19 25 25 C 1.38308 * 120.14496 * 359.97438 * 20 19 15 26 26 C 1.38089 * 120.07558 * 359.74257 * 25 20 19 27 27 C 1.53779 * 113.61410 * 210.00574 * 3 2 1 28 28 H 1.08993 * 109.47408 * 59.99781 * 1 2 3 29 29 H 1.09001 * 109.46813 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.46851 * 299.99454 * 1 2 3 31 31 H 1.09002 * 113.61557 * 25.44640 * 5 3 2 32 32 H 1.09004 * 113.61501 * 254.54060 * 5 3 2 33 33 H 0.96998 * 120.00377 * 287.50245 * 8 6 5 34 34 H 1.09003 * 109.46837 * 299.99928 * 11 9 8 35 35 H 1.09000 * 109.47088 * 59.99953 * 11 9 8 36 36 H 1.09009 * 109.47054 * 60.00283 * 13 12 11 37 37 H 1.09002 * 109.47307 * 179.97438 * 13 12 11 38 38 H 1.08999 * 109.47066 * 300.00429 * 13 12 11 39 39 H 1.08991 * 109.47373 * 314.99372 * 16 15 14 40 40 H 0.96702 * 114.00436 * 299.99741 * 17 16 15 41 41 H 1.48500 * 110.00103 * 298.67960 * 18 16 15 42 42 H 1.48494 * 110.00088 * 60.00052 * 18 16 15 43 43 H 1.08002 * 119.96692 * 180.02562 * 19 15 14 44 44 H 1.08000 * 119.96310 * 180.02562 * 25 20 19 45 45 H 1.08000 * 120.03442 * 180.27874 * 26 25 20 46 46 H 1.08997 * 113.61646 * 105.38742 * 27 3 2 47 47 H 1.09000 * 113.61527 * 334.48013 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0789 -0.3237 5 6 2.7532 1.6510 1.3013 6 6 3.8221 2.3199 0.4209 7 1 4.8421 2.1427 0.7620 8 7 3.5517 3.7321 0.1405 9 6 4.2913 4.6904 0.7330 10 8 5.1803 4.3836 1.4987 11 6 4.0128 6.1432 0.4450 12 7 4.9472 6.9815 1.2078 13 6 4.7060 6.8590 2.6518 14 6 4.8715 8.3149 0.7991 15 6 5.9947 8.9504 0.2857 16 6 7.2973 8.2017 0.1682 17 8 7.2279 7.2950 -0.9341 18 14 8.6863 9.4119 -0.1096 19 6 5.9163 10.2689 -0.1181 20 6 4.7214 10.9564 -0.0111 21 6 4.6398 12.3951 -0.4521 22 9 4.2806 12.4491 -1.8032 23 9 3.6781 13.0635 0.3130 24 9 5.8848 13.0083 -0.2757 25 6 3.6010 10.3267 0.4997 26 6 3.6710 9.0069 0.8998 27 6 3.3755 1.3718 -0.7046 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8901 31 1 3.1170 0.7771 1.8417 32 1 2.2134 2.3503 1.9398 33 1 2.8404 3.9775 -0.4717 34 1 4.1404 6.3333 -0.6207 35 1 2.9900 6.3819 0.7367 36 1 4.8399 5.8208 2.9557 37 1 5.4117 7.4895 3.1928 38 1 3.6878 7.1755 2.8781 39 1 7.4799 7.6438 1.0866 40 1 6.5254 6.6350 -0.8569 41 1 8.4655 10.1565 -1.3753 42 1 8.7690 10.3604 1.0299 43 1 6.7892 10.7635 -0.5178 44 1 2.6691 10.8664 0.5815 45 1 2.7945 8.5144 1.2944 46 1 3.3381 1.8457 -1.6855 47 1 3.9094 0.4216 -0.7127 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_6406254.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:47 Heat of formation + Delta-G solvation = -177.820853 kcal Electronic energy + Delta-G solvation = -35149.932295 eV Core-core repulsion = 29886.483706 eV Total energy + Delta-G solvation = -5263.448589 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.149 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -51.38065 -48.90849 -48.83992 -41.91528 -41.17001 -39.84224 -37.86117 -37.61819 -37.12111 -34.04682 -33.11205 -32.22256 -29.52742 -27.84109 -27.63416 -27.03813 -26.74738 -25.46332 -24.74462 -23.51306 -22.29049 -21.62683 -20.58440 -19.73562 -19.68384 -19.57648 -18.69058 -18.20431 -17.90687 -17.58562 -17.07624 -16.84966 -16.61485 -16.45016 -16.20473 -16.02651 -15.89805 -15.75566 -15.70052 -15.47917 -15.27499 -15.06673 -15.02788 -14.99982 -14.80403 -14.78436 -14.22850 -14.07020 -13.96445 -13.76509 -13.67179 -13.47821 -13.34947 -13.30137 -13.02903 -12.85266 -12.66916 -12.31623 -12.14608 -11.93905 -11.51314 -11.46277 -11.08316 -10.93118 -10.46183 -10.37102 -10.20989 -10.09558 -9.71047 -4.89622 -0.49732 -0.12574 1.30833 1.42276 1.57042 1.57220 1.83059 1.85342 2.05919 2.47107 2.64031 2.77350 2.88619 3.18065 3.40507 3.45775 3.46538 3.53770 3.62281 3.79878 3.84128 3.93420 3.95528 3.96352 4.01487 4.13861 4.24590 4.34538 4.39264 4.41218 4.45159 4.49786 4.52878 4.54432 4.75837 4.78927 4.80957 4.84661 4.85199 4.93299 4.95922 4.98655 5.01345 5.07756 5.26159 5.51103 5.54834 6.00466 6.28786 6.51690 6.58939 7.24028 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.402 6.402 3 C 0.060 3.940 4 H 0.107 0.893 5 C -0.166 4.166 6 C 0.126 3.874 7 H 0.091 0.909 8 N -0.702 5.702 9 C 0.519 3.481 10 O -0.556 6.556 11 C 0.037 3.963 12 N -0.502 5.502 13 C 0.025 3.975 14 C 0.136 3.864 15 C -0.098 4.098 16 C -0.070 4.070 17 O -0.540 6.540 18 Si 0.788 3.212 19 C -0.083 4.083 20 C -0.187 4.187 21 C 0.507 3.493 22 F -0.179 7.179 23 F -0.173 7.173 24 F -0.186 7.186 25 C -0.052 4.052 26 C -0.134 4.134 27 C -0.137 4.137 28 H 0.054 0.946 29 H 0.088 0.912 30 H 0.047 0.953 31 H 0.088 0.912 32 H 0.073 0.927 33 H 0.416 0.584 34 H 0.127 0.873 35 H 0.103 0.897 36 H 0.083 0.917 37 H 0.066 0.934 38 H 0.049 0.951 39 H 0.088 0.912 40 H 0.371 0.629 41 H -0.285 1.285 42 H -0.267 1.267 43 H 0.126 0.874 44 H 0.161 0.839 45 H 0.167 0.833 46 H 0.094 0.906 47 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.096 -3.121 -0.279 6.855 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.321 6.321 3 C 0.003 3.997 4 H 0.125 0.875 5 C -0.205 4.205 6 C 0.020 3.980 7 H 0.110 0.890 8 N -0.355 5.355 9 C 0.305 3.695 10 O -0.433 6.433 11 C -0.092 4.092 12 N -0.224 5.224 13 C -0.121 4.121 14 C 0.042 3.958 15 C -0.100 4.100 16 C -0.179 4.179 17 O -0.346 6.346 18 Si 0.691 3.309 19 C -0.102 4.102 20 C -0.188 4.188 21 C 0.453 3.547 22 F -0.160 7.160 23 F -0.154 7.154 24 F -0.167 7.167 25 C -0.070 4.070 26 C -0.153 4.153 27 C -0.175 4.175 28 H 0.073 0.927 29 H 0.107 0.893 30 H 0.066 0.934 31 H 0.106 0.894 32 H 0.091 0.909 33 H 0.254 0.746 34 H 0.145 0.855 35 H 0.120 0.880 36 H 0.101 0.899 37 H 0.085 0.915 38 H 0.068 0.932 39 H 0.106 0.894 40 H 0.220 0.780 41 H -0.212 1.212 42 H -0.193 1.193 43 H 0.143 0.857 44 H 0.178 0.822 45 H 0.185 0.815 46 H 0.113 0.887 47 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -4.158 -2.489 -0.119 4.848 hybrid contribution -2.742 0.626 0.219 2.821 sum -6.900 -1.863 0.099 7.148 Atomic orbital electron populations 1.22940 0.79903 1.03589 1.00792 1.87931 1.21146 1.28409 1.94652 1.23960 0.94240 0.85371 0.96176 0.87520 1.23938 0.97978 1.00875 0.97730 1.21467 0.99338 0.80288 0.96951 0.89041 1.45519 1.37288 1.04668 1.48003 1.20688 0.80973 0.88061 0.79744 1.90730 1.32480 1.83573 1.36480 1.22213 0.96731 0.88918 1.01377 1.59145 1.53166 1.03777 1.06315 1.22601 1.00573 1.04191 0.84738 1.18806 0.92148 0.89778 0.95068 1.20315 0.97119 0.93226 0.99314 1.25164 1.00254 0.98371 0.94148 1.86686 1.58392 1.46264 1.43276 0.92345 0.86212 0.74987 0.77388 1.20787 0.96720 0.94623 0.98053 1.19979 0.97587 0.92235 1.09047 1.18397 0.73465 0.87722 0.75116 1.93235 1.91692 1.96977 1.34123 1.93204 1.64068 1.82738 1.75429 1.93191 1.43110 1.85286 1.95122 1.21137 0.97395 0.95023 0.93488 1.21968 0.98978 0.94180 1.00218 1.23561 0.95311 1.00014 0.98587 0.92713 0.89320 0.93428 0.89390 0.90869 0.74634 0.85492 0.87955 0.89853 0.91476 0.93213 0.89356 0.78047 1.21188 1.19284 0.85691 0.82178 0.81523 0.88729 0.88448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 10.85 113.37 1.23 1.14 16 2 O -0.40 -0.42 10.72 -148.98 -1.60 -2.01 16 3 C 0.06 -0.26 4.18 31.12 0.13 -0.13 16 4 H 0.11 -0.96 7.87 -2.38 -0.02 -0.98 16 5 C -0.17 0.46 7.71 31.12 0.24 0.70 16 6 C 0.13 -0.45 4.32 45.52 0.20 -0.25 16 7 H 0.09 0.12 7.47 -2.39 -0.02 0.10 16 8 N -0.70 5.27 5.26 -440.02 -2.32 2.96 16 9 C 0.52 -1.72 7.56 87.66 0.66 -1.06 16 10 O -0.56 -3.33 13.91 -3.03 -0.04 -3.38 16 11 C 0.04 -0.31 4.90 85.56 0.42 0.11 16 12 N -0.50 1.72 3.19 -724.42 -2.31 -0.59 16 13 C 0.02 -0.07 8.94 127.69 1.14 1.07 16 14 C 0.14 -0.31 4.61 38.21 0.18 -0.14 16 15 C -0.10 -0.21 5.28 -19.73 -0.10 -0.31 16 16 C -0.07 -0.16 2.30 71.24 0.16 0.00 16 17 O -0.54 -1.88 12.65 -148.98 -1.89 -3.76 16 18 Si 0.79 1.77 30.41 68.60 2.09 3.85 16 19 C -0.08 -0.36 8.01 22.25 0.18 -0.18 16 20 C -0.19 -0.45 5.46 -19.84 -0.11 -0.56 16 21 C 0.51 2.40 3.36 71.23 0.24 2.64 16 22 F -0.18 -1.10 17.30 44.97 0.78 -0.33 16 23 F -0.17 -0.69 16.46 44.97 0.74 0.05 16 24 F -0.19 -1.41 16.46 44.97 0.74 -0.67 16 25 C -0.05 0.16 9.39 22.25 0.21 0.36 16 26 C -0.13 0.76 8.70 22.40 0.19 0.96 16 27 C -0.14 0.69 7.66 31.12 0.24 0.93 16 28 H 0.05 -0.36 8.14 -2.39 -0.02 -0.38 16 29 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 30 H 0.05 -0.25 8.14 -2.38 -0.02 -0.27 16 31 H 0.09 -0.01 8.14 -2.39 -0.02 -0.02 16 32 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 33 H 0.42 -5.74 8.70 -92.71 -0.81 -6.55 16 34 H 0.13 -1.46 8.06 -2.39 -0.02 -1.48 16 35 H 0.10 -1.41 7.46 -2.39 -0.02 -1.43 16 36 H 0.08 0.12 5.88 -2.38 -0.01 0.10 16 37 H 0.07 -0.08 8.12 -2.39 -0.02 -0.10 16 38 H 0.05 -0.33 7.49 -2.39 -0.02 -0.35 16 39 H 0.09 0.17 7.78 -2.39 -0.02 0.15 16 40 H 0.37 -0.01 8.38 -74.06 -0.62 -0.63 16 41 H -0.28 -2.20 6.81 99.48 0.68 -1.53 16 42 H -0.27 -1.44 7.11 99.48 0.71 -0.73 16 43 H 0.13 0.78 4.48 -2.91 -0.01 0.77 16 44 H 0.16 -1.11 7.60 -2.91 -0.02 -1.13 16 45 H 0.17 -1.95 7.16 -2.91 -0.02 -1.97 16 46 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 47 H 0.10 -0.28 8.14 -2.39 -0.02 -0.30 16 Total: 0.00 -17.78 396.94 1.02 -16.76 By element: Atomic # 1 Polarization: -17.78 SS G_CDS: -0.38 Total: -18.16 kcal Atomic # 6 Polarization: 0.07 SS G_CDS: 5.21 Total: 5.28 kcal Atomic # 7 Polarization: 6.99 SS G_CDS: -4.63 Total: 2.36 kcal Atomic # 8 Polarization: -5.63 SS G_CDS: -3.52 Total: -9.15 kcal Atomic # 9 Polarization: -3.20 SS G_CDS: 2.26 Total: -0.94 kcal Atomic # 14 Polarization: 1.77 SS G_CDS: 2.09 Total: 3.85 kcal Total: -17.78 1.02 -16.76 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_6406254.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -161.061 kcal (2) G-P(sol) polarization free energy of solvation -17.781 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.842 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.022 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.759 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.821 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds