Wall clock time and date at job start Tue Mar 9 2021 13:01:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42893 * 113.99811 * 2 1 4 4 H 1.09001 * 112.85574 * 341.19709 * 3 2 1 5 5 C 1.53790 * 113.69040 * 112.46530 * 3 2 1 6 6 C 1.53781 * 87.08209 * 139.99179 * 5 3 2 7 7 H 1.08994 * 113.69333 * 89.12474 * 6 5 3 8 8 C 1.52993 * 113.61355 * 220.02189 * 6 5 3 9 9 N 1.46499 * 109.46898 * 272.49372 * 8 6 5 10 10 C 1.34781 * 120.00074 * 179.97438 * 9 8 6 11 11 O 1.21620 * 119.99985 * 0.02562 * 10 9 8 12 12 C 1.47293 * 119.99929 * 180.02562 * 10 9 8 13 13 C 1.40378 * 120.04594 * 179.97438 * 12 10 9 14 14 O 1.35672 * 120.13512 * 0.04934 * 13 12 10 15 15 C 1.38311 * 119.72634 * 180.02562 * 13 12 10 16 16 C 1.39574 * 119.81444 * 0.02562 * 15 13 12 17 17 C 1.47560 * 119.95670 * 180.02562 * 16 15 13 18 18 C 1.36109 * 125.94613 * 179.97438 * 17 16 15 19 19 C 1.40795 * 106.73337 * 180.28489 * 18 17 16 20 20 C 1.34833 * 107.04981 * 359.56997 * 19 18 17 21 21 C 1.50704 * 125.65107 * 180.15919 * 20 19 18 22 22 O 1.42898 * 109.47221 * 65.29854 * 21 20 19 23 23 Si 1.86301 * 109.46886 * 185.29873 * 21 20 19 24 24 O 1.34226 * 108.69670 * 0.43348 * 20 19 18 25 25 C 1.39962 * 120.08581 * 0.27157 * 16 15 13 26 26 C 1.36393 * 120.28105 * 359.44450 * 25 16 15 27 27 C 1.53777 * 113.61443 * 209.99839 * 3 2 1 28 28 H 1.08998 * 109.46847 * 60.00386 * 1 2 3 29 29 H 1.09001 * 109.46809 * 179.97438 * 1 2 3 30 30 H 1.08994 * 109.47495 * 299.99697 * 1 2 3 31 31 H 1.09000 * 113.60922 * 25.43882 * 5 3 2 32 32 H 1.09000 * 113.61420 * 254.54174 * 5 3 2 33 33 H 1.09000 * 109.47496 * 152.49767 * 8 6 5 34 34 H 1.08996 * 109.47890 * 32.49373 * 8 6 5 35 35 H 0.97003 * 120.00327 * 0.02562 * 9 8 6 36 36 H 0.96699 * 114.00154 * 269.97936 * 14 13 12 37 37 H 1.07994 * 120.09731 * 179.97438 * 15 13 12 38 38 H 1.08002 * 126.62860 * 0.02562 * 18 17 16 39 39 H 1.08005 * 126.47523 * 179.73654 * 19 18 17 40 40 H 1.08999 * 109.46855 * 305.29506 * 21 20 19 41 41 H 0.96697 * 113.99755 * 60.00201 * 22 21 20 42 42 H 1.48500 * 110.00201 * 58.67959 * 23 21 20 43 43 H 1.48500 * 110.00036 * 179.97438 * 23 21 20 44 44 H 1.08004 * 119.86030 * 179.73133 * 25 16 15 45 45 H 1.07995 * 119.90961 * 180.27997 * 26 25 16 46 46 H 1.09001 * 113.61799 * 105.38729 * 27 3 2 47 47 H 1.09007 * 113.61628 * 334.48351 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3137 2.0789 -0.3237 5 6 2.7531 1.6511 1.3014 6 6 3.8220 2.3199 0.4211 7 1 3.6221 3.3707 0.2118 8 6 5.2536 2.0713 0.8999 9 7 5.6246 3.0935 1.8816 10 6 6.8491 3.0744 2.4445 11 8 7.6462 2.2087 2.1372 12 6 7.2219 4.1018 3.4319 13 6 8.4967 4.0825 4.0192 14 8 9.3890 3.1188 3.6787 15 6 8.8396 5.0501 4.9460 16 6 7.9164 6.0384 5.2914 17 6 8.2791 7.0726 6.2794 18 6 7.4784 8.0883 6.7035 19 6 8.2268 8.8324 7.6354 20 6 9.4315 8.2362 7.7413 21 6 10.5604 8.6889 8.6311 22 8 10.1718 8.5538 9.9996 23 14 12.0657 7.6404 8.3065 24 8 9.4608 7.1762 6.9184 25 6 6.6453 6.0466 4.7056 26 6 6.3053 5.0975 3.7869 27 6 3.3755 1.3719 -0.7045 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5137 0.8899 31 1 3.1168 0.7771 1.8418 32 1 2.2132 2.3503 1.9399 33 1 5.9346 2.1196 0.0502 34 1 5.3168 1.0855 1.3605 35 1 4.9888 3.7838 2.1270 36 1 9.3408 2.3257 4.2298 37 1 9.8186 5.0407 5.4019 38 1 6.4663 8.2874 6.3835 39 1 7.8971 9.7128 8.1671 40 1 10.7925 9.7329 8.4207 41 1 9.9503 7.6487 10.2580 42 1 12.4610 7.7473 6.8790 43 1 13.1864 8.0772 9.1774 44 1 5.9323 6.8104 4.9787 45 1 5.3244 5.1122 3.3353 46 1 3.3382 1.8458 -1.6854 47 1 3.9095 0.4216 -0.7124 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:18 Heat of formation + Delta-G solvation = -75.444315 kcal Electronic energy + Delta-G solvation = -30696.363179 eV Core-core repulsion = 26200.174240 eV Total energy + Delta-G solvation = -4496.188939 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -43.76208 -41.55520 -40.67700 -39.49145 -38.13368 -37.83558 -37.41438 -35.24585 -34.25959 -33.45391 -31.36325 -30.67796 -29.16783 -27.58003 -26.91952 -26.68119 -24.51463 -24.11845 -23.32554 -22.39016 -21.94571 -21.36754 -20.70766 -19.73881 -18.84815 -18.53168 -17.79210 -17.72814 -17.44185 -17.15115 -16.78967 -16.59858 -16.38989 -16.29301 -16.03286 -15.83757 -15.79243 -15.60625 -15.11333 -14.75814 -14.36826 -14.24714 -14.14209 -14.04553 -13.89605 -13.67471 -13.60767 -13.51569 -13.49461 -12.94008 -12.88727 -12.76092 -12.56745 -12.12976 -12.04990 -11.83590 -11.80333 -11.52101 -11.15148 -10.75962 -10.75317 -10.61097 -10.48987 -10.07925 -9.97134 -9.03695 -5.08769 -0.79875 0.09384 0.64058 1.09115 1.38313 1.43994 1.73380 1.89360 1.98999 2.06954 2.63715 2.78487 3.00016 3.19483 3.32914 3.37321 3.46238 3.50939 3.65670 3.69788 3.73503 3.82566 3.88586 3.92068 4.00822 4.13853 4.18287 4.24189 4.35197 4.36396 4.41078 4.54151 4.61644 4.63523 4.64761 4.72204 4.73665 4.75076 4.77970 4.83026 4.90468 4.97830 5.04443 5.06770 5.15472 5.19459 5.35493 5.40890 5.45034 5.93601 6.21896 6.33679 6.44948 6.68755 7.23200 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.088 0.912 5 C -0.151 4.151 6 C -0.125 4.125 7 H 0.100 0.900 8 C 0.133 3.867 9 N -0.727 5.727 10 C 0.557 3.443 11 O -0.517 6.517 12 C -0.164 4.164 13 C 0.179 3.821 14 O -0.474 6.474 15 C -0.140 4.140 16 C 0.030 3.970 17 C 0.024 3.976 18 C -0.178 4.178 19 C -0.174 4.174 20 C -0.045 4.045 21 C -0.028 4.028 22 O -0.530 6.530 23 Si 0.700 3.300 24 O -0.161 6.161 25 C -0.116 4.116 26 C -0.065 4.065 27 C -0.127 4.127 28 H 0.042 0.958 29 H 0.086 0.914 30 H 0.042 0.958 31 H 0.094 0.906 32 H 0.071 0.929 33 H 0.073 0.927 34 H 0.073 0.927 35 H 0.399 0.601 36 H 0.399 0.601 37 H 0.144 0.856 38 H 0.156 0.844 39 H 0.155 0.845 40 H 0.134 0.866 41 H 0.384 0.616 42 H -0.252 1.252 43 H -0.245 1.245 44 H 0.138 0.862 45 H 0.136 0.864 46 H 0.077 0.923 47 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.871 1.162 1.770 6.241 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.106 0.894 5 C -0.189 4.189 6 C -0.144 4.144 7 H 0.118 0.882 8 C 0.010 3.990 9 N -0.381 5.381 10 C 0.344 3.656 11 O -0.394 6.394 12 C -0.168 4.168 13 C 0.132 3.868 14 O -0.285 6.285 15 C -0.159 4.159 16 C 0.029 3.971 17 C -0.026 4.026 18 C -0.197 4.197 19 C -0.193 4.193 20 C -0.096 4.096 21 C -0.138 4.138 22 O -0.336 6.336 23 Si 0.599 3.401 24 O -0.058 6.058 25 C -0.134 4.134 26 C -0.083 4.083 27 C -0.165 4.165 28 H 0.061 0.939 29 H 0.105 0.895 30 H 0.060 0.940 31 H 0.112 0.888 32 H 0.089 0.911 33 H 0.091 0.909 34 H 0.092 0.908 35 H 0.234 0.766 36 H 0.258 0.742 37 H 0.162 0.838 38 H 0.174 0.826 39 H 0.173 0.827 40 H 0.151 0.849 41 H 0.232 0.768 42 H -0.176 1.176 43 H -0.170 1.170 44 H 0.156 0.844 45 H 0.154 0.846 46 H 0.096 0.904 47 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -3.807 1.154 0.794 4.057 hybrid contribution -1.355 1.001 0.313 1.714 sum -5.163 2.155 1.107 5.703 Atomic orbital electron populations 1.22815 0.80930 1.03040 0.99978 1.87964 1.19851 1.27153 1.94546 1.23695 0.93924 0.85546 0.96663 0.89374 1.23632 0.97066 1.01041 0.97121 1.22574 0.93741 1.00074 0.97980 0.88231 1.21344 0.94383 0.91575 0.91705 1.45905 1.15368 1.32293 1.44506 1.17969 0.81779 0.84759 0.81090 1.90854 1.49716 1.37128 1.61659 1.20503 0.95055 0.99080 1.02170 1.18287 0.86616 0.90487 0.91427 1.84775 1.55420 1.28326 1.60021 1.21594 1.00750 0.95370 0.98173 1.17751 0.93949 0.91935 0.93469 1.20325 0.84500 0.98927 0.98871 1.21907 1.01366 0.95997 1.00400 1.21582 0.93554 1.02697 1.01466 1.22997 0.99411 0.89633 0.97521 1.24421 1.01042 1.06841 0.81537 1.86565 1.89993 1.34481 1.22514 0.94263 0.75783 0.88397 0.81612 1.83938 1.34433 1.42176 1.45278 1.20700 0.95224 1.00038 0.97477 1.20808 0.98671 0.92902 0.95958 1.23214 0.95318 1.00232 0.97704 0.93915 0.89509 0.93967 0.88780 0.91071 0.90908 0.90838 0.76614 0.74211 0.83789 0.82632 0.82709 0.84894 0.76808 1.17643 1.16956 0.84384 0.84649 0.90402 0.88515 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.54 10.72 -35.23 -0.38 -0.92 16 3 C 0.06 -0.06 4.31 -25.92 -0.11 -0.17 16 4 H 0.09 -0.20 7.87 -51.93 -0.41 -0.61 16 5 C -0.15 0.27 7.47 -25.91 -0.19 0.08 16 6 C -0.12 0.31 3.75 -89.81 -0.34 -0.03 16 7 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 8 C 0.13 -0.07 5.51 -4.05 -0.02 -0.09 16 9 N -0.73 0.50 5.50 -61.43 -0.34 0.16 16 10 C 0.56 1.36 7.75 -12.58 -0.10 1.27 16 11 O -0.52 -3.24 15.14 -16.70 -0.25 -3.49 16 12 C -0.16 -0.17 5.89 -104.78 -0.62 -0.78 16 13 C 0.18 0.32 6.71 -38.75 -0.26 0.06 16 14 O -0.47 -1.22 11.56 -40.68 -0.47 -1.69 16 15 C -0.14 -0.12 9.65 -39.06 -0.38 -0.49 16 16 C 0.03 0.01 5.87 -104.95 -0.62 -0.61 16 17 C 0.02 0.02 7.02 -36.55 -0.26 -0.24 16 18 C -0.18 0.01 10.26 -39.38 -0.40 -0.40 16 19 C -0.17 -0.07 10.78 -39.82 -0.43 -0.50 16 20 C -0.05 -0.02 6.21 -35.51 -0.22 -0.24 16 21 C -0.03 0.02 2.98 36.01 0.11 0.13 16 22 O -0.53 0.35 12.88 -35.23 -0.45 -0.11 16 23 Si 0.70 -0.64 32.11 -169.99 -5.46 -6.10 16 24 O -0.16 -0.20 8.79 4.72 0.04 -0.15 16 25 C -0.12 0.18 9.48 -39.60 -0.38 -0.19 16 26 C -0.06 0.11 9.47 -39.62 -0.38 -0.26 16 27 C -0.13 0.18 7.47 -25.92 -0.19 -0.02 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 32 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.07 0.05 7.84 -51.93 -0.41 -0.36 16 35 H 0.40 -1.41 6.48 -40.82 -0.26 -1.67 16 36 H 0.40 -0.52 9.06 45.56 0.41 -0.11 16 37 H 0.14 0.01 7.89 -52.49 -0.41 -0.40 16 38 H 0.16 -0.38 7.24 -52.49 -0.38 -0.76 16 39 H 0.16 -0.11 8.06 -52.48 -0.42 -0.54 16 40 H 0.13 -0.15 7.96 -51.93 -0.41 -0.56 16 41 H 0.38 -1.69 8.70 45.56 0.40 -1.29 16 42 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 43 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 44 H 0.14 -0.54 6.95 -52.48 -0.37 -0.90 16 45 H 0.14 -0.66 6.38 -52.49 -0.33 -1.00 16 46 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 LS Contribution 399.77 15.07 6.02 6.02 Total: 0.00 -10.32 399.77 -10.56 -20.88 By element: Atomic # 1 Polarization: -7.60 SS G_CDS: -5.59 Total: -13.18 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -3.68 Total: -1.42 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.34 Total: 0.16 kcal Atomic # 8 Polarization: -4.85 SS G_CDS: -1.51 Total: -6.36 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.46 Total: -6.10 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -10.32 -10.56 -20.88 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.563 kcal (2) G-P(sol) polarization free energy of solvation -10.325 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.887 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.557 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.882 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.444 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds