Wall clock time and date at job start Tue Mar 9 2021 13:02:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42905 * 113.99756 * 2 1 4 4 H 1.09002 * 112.84917 * 20.33189 * 3 2 1 5 5 C 1.53786 * 113.61467 * 151.52678 * 3 2 1 6 6 C 1.53783 * 87.08050 * 140.06319 * 5 3 2 7 7 H 1.09005 * 113.60997 * 89.20380 * 6 5 3 8 8 C 1.52997 * 113.61545 * 220.02097 * 6 5 3 9 9 N 1.46498 * 109.47113 * 185.00271 * 8 6 5 10 10 C 1.34783 * 120.00021 * 179.97438 * 9 8 6 11 11 O 1.21694 * 119.99965 * 0.02562 * 10 9 8 12 12 C 1.46671 * 119.99840 * 180.02562 * 10 9 8 13 13 C 1.37871 * 126.23318 * 180.02562 * 12 10 9 14 14 C 1.50700 * 126.45675 * 359.92026 * 13 12 10 15 15 C 1.39835 * 107.08921 * 179.97438 * 13 12 10 16 16 C 1.35460 * 107.86375 * 359.97438 * 15 13 12 17 17 C 1.50689 * 125.56409 * 180.02562 * 16 15 13 18 18 O 1.42908 * 109.47184 * 64.99888 * 17 16 15 19 19 Si 1.86305 * 109.47153 * 184.99900 * 17 16 15 20 20 N 1.35532 * 108.86677 * 359.76851 * 16 15 13 21 21 C 1.53781 * 113.61505 * 249.13537 * 3 2 1 22 22 H 1.09001 * 109.47323 * 300.00132 * 1 2 3 23 23 H 1.09007 * 109.47045 * 60.00072 * 1 2 3 24 24 H 1.08999 * 109.47020 * 179.97438 * 1 2 3 25 25 H 1.08992 * 113.61675 * 254.61578 * 5 3 2 26 26 H 1.09005 * 113.61030 * 25.43227 * 5 3 2 27 27 H 1.09006 * 109.46955 * 304.99851 * 8 6 5 28 28 H 1.08999 * 109.47327 * 65.00182 * 8 6 5 29 29 H 0.97004 * 119.99763 * 0.02562 * 9 8 6 30 30 H 1.09005 * 109.46648 * 90.00360 * 14 13 12 31 31 H 1.08996 * 109.47683 * 210.00345 * 14 13 12 32 32 H 1.08994 * 109.47267 * 330.00884 * 14 13 12 33 33 H 1.08001 * 126.06944 * 179.97438 * 15 13 12 34 34 H 1.09005 * 109.47532 * 305.00153 * 17 16 15 35 35 H 0.96706 * 113.99364 * 60.00304 * 18 17 16 36 36 H 1.48503 * 109.99580 * 58.68453 * 19 17 16 37 37 H 1.48505 * 109.99931 * 179.97438 * 19 17 16 38 38 H 0.97002 * 125.67283 * 180.26566 * 20 16 15 39 39 H 1.08999 * 113.61567 * 334.48276 * 21 3 2 40 40 H 1.08998 * 113.61196 * 105.38630 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3218 2.0753 0.3490 5 6 3.3923 1.3646 0.6718 6 6 3.8113 2.3248 -0.4540 7 1 3.6167 3.3733 -0.2284 8 6 5.2309 2.0816 -0.9703 9 7 5.5780 3.1145 -1.9495 10 6 6.7887 3.1022 -2.5415 11 8 7.5935 2.2328 -2.2629 12 6 7.1364 4.1366 -3.5215 13 6 8.3307 4.2465 -4.2014 14 6 9.5204 3.3299 -4.0758 15 6 8.2308 5.3695 -5.0287 16 6 7.0041 5.9136 -4.8442 17 6 6.4759 7.1409 -5.5410 18 8 6.3549 6.8791 -6.9407 19 14 4.8046 7.5796 -4.8445 20 7 6.3273 5.1706 -3.9349 21 6 2.7192 1.6642 -1.3166 22 1 -0.3634 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8901 24 1 -0.3633 -1.0277 -0.0005 25 1 3.3789 1.8277 1.6583 26 1 3.9255 0.4139 0.6577 27 1 5.9323 2.1208 -0.1368 28 1 5.2826 1.1008 -1.4429 29 1 4.9366 3.8076 -2.1713 30 1 9.4324 2.5193 -4.7992 31 1 10.4341 3.8918 -4.2691 32 1 9.5549 2.9155 -3.0683 33 1 8.9959 5.7376 -5.6962 34 1 7.1640 7.9718 -5.3850 35 1 5.7564 6.1501 -7.1541 36 1 4.9113 7.8232 -3.3835 37 1 4.2730 8.7889 -5.5230 38 1 5.4238 5.3405 -3.6254 39 1 3.0694 0.7958 -1.8746 40 1 2.1627 2.3692 -1.9342 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_13940406.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:17 Heat of formation + Delta-G solvation = -43.027161 kcal Electronic energy + Delta-G solvation = -21888.527475 eV Core-core repulsion = 18478.587284 eV Total energy + Delta-G solvation = -3409.940191 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.59013 -40.88313 -39.87550 -37.82472 -37.47156 -35.41665 -33.54998 -31.62695 -29.39980 -28.25272 -27.62670 -26.87632 -26.37557 -23.56854 -22.36343 -21.59865 -21.00944 -20.19241 -19.64147 -18.00015 -17.81158 -16.94745 -16.84822 -16.68094 -16.62420 -16.28916 -15.99157 -15.51218 -15.10974 -14.98958 -14.68227 -14.28186 -14.02827 -13.88540 -13.66645 -13.54798 -13.47258 -13.35691 -12.98186 -12.90864 -12.61214 -12.57448 -12.25861 -12.07996 -11.84364 -11.55529 -10.90919 -10.65479 -10.51988 -10.18941 -9.77355 -9.13498 -5.42075 0.36167 0.94239 1.26822 1.63205 1.67194 1.90660 2.04780 2.39936 2.75870 3.25132 3.33195 3.43253 3.57079 3.65238 3.67137 3.81948 3.97623 4.12914 4.19583 4.31342 4.33595 4.34123 4.39020 4.57667 4.59912 4.69684 4.72135 4.76271 4.80121 4.86700 4.96084 5.00460 5.05965 5.14364 5.24248 5.32604 5.49816 5.70075 5.94658 6.19407 6.20156 6.38427 6.43284 7.16191 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.088 0.912 5 C -0.126 4.126 6 C -0.126 4.126 7 H 0.099 0.901 8 C 0.134 3.866 9 N -0.733 5.733 10 C 0.589 3.411 11 O -0.520 6.520 12 C -0.052 4.052 13 C -0.068 4.068 14 C -0.093 4.093 15 C -0.172 4.172 16 C 0.013 3.987 17 C -0.037 4.037 18 O -0.531 6.531 19 Si 0.669 3.331 20 N -0.535 5.535 21 C -0.152 4.152 22 H 0.042 0.958 23 H 0.042 0.958 24 H 0.087 0.913 25 H 0.077 0.923 26 H 0.097 0.903 27 H 0.074 0.926 28 H 0.076 0.924 29 H 0.393 0.607 30 H 0.069 0.931 31 H 0.064 0.936 32 H 0.081 0.919 33 H 0.146 0.854 34 H 0.129 0.871 35 H 0.381 0.619 36 H -0.250 1.250 37 H -0.242 1.242 38 H 0.410 0.590 39 H 0.095 0.905 40 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.992 1.711 0.296 6.239 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.106 0.894 5 C -0.164 4.164 6 C -0.145 4.145 7 H 0.117 0.883 8 C 0.010 3.990 9 N -0.384 5.384 10 C 0.377 3.623 11 O -0.396 6.396 12 C -0.164 4.164 13 C -0.077 4.077 14 C -0.150 4.150 15 C -0.197 4.197 16 C -0.103 4.103 17 C -0.149 4.149 18 O -0.336 6.336 19 Si 0.569 3.431 20 N -0.136 5.136 21 C -0.189 4.189 22 H 0.061 0.939 23 H 0.060 0.940 24 H 0.105 0.895 25 H 0.096 0.904 26 H 0.115 0.885 27 H 0.092 0.908 28 H 0.094 0.906 29 H 0.226 0.774 30 H 0.088 0.912 31 H 0.083 0.917 32 H 0.100 0.900 33 H 0.164 0.836 34 H 0.146 0.854 35 H 0.228 0.772 36 H -0.175 1.175 37 H -0.165 1.165 38 H 0.249 0.751 39 H 0.113 0.887 40 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -5.530 1.994 0.971 5.958 hybrid contribution -0.481 0.893 0.020 1.014 sum -6.011 2.886 0.992 6.741 Atomic orbital electron populations 1.22815 0.80916 1.03058 0.99972 1.87968 1.19859 1.27112 1.94553 1.23692 0.93945 0.85562 0.96605 0.89414 1.23192 0.95253 1.00163 0.97748 1.22630 0.93804 1.00016 0.98010 0.88324 1.21364 0.94727 0.91328 0.91533 1.45883 1.16178 1.31713 1.44669 1.17014 0.81681 0.83805 0.79793 1.90852 1.48933 1.36698 1.63070 1.20181 0.94093 0.95331 1.06800 1.20046 0.94251 0.97117 0.96277 1.20389 0.93445 0.97377 1.03796 1.20649 0.96880 0.98073 1.04072 1.20841 0.94523 0.97710 0.97188 1.24532 1.09964 0.95227 0.85224 1.86570 1.70155 1.57008 1.19856 0.95623 0.79426 0.88145 0.79895 1.41965 1.14509 1.22710 1.34422 1.23693 0.97011 1.01073 0.97170 0.93920 0.93968 0.89492 0.90399 0.88453 0.90793 0.90621 0.77370 0.91195 0.91732 0.90048 0.83581 0.85399 0.77167 1.17462 1.16501 0.75067 0.88698 0.91064 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.43 10.71 -35.23 -0.38 -0.81 16 3 C 0.06 -0.08 4.29 -25.92 -0.11 -0.19 16 4 H 0.09 -0.23 7.88 -51.93 -0.41 -0.64 16 5 C -0.13 0.22 7.47 -25.92 -0.19 0.03 16 6 C -0.13 0.36 3.76 -89.66 -0.34 0.02 16 7 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 8 C 0.13 -0.13 5.51 -4.04 -0.02 -0.15 16 9 N -0.73 0.75 5.55 -61.62 -0.34 0.41 16 10 C 0.59 1.41 7.79 -12.85 -0.10 1.31 16 11 O -0.52 -3.08 14.80 5.19 0.08 -3.00 16 12 C -0.05 -0.08 7.06 -81.98 -0.58 -0.66 16 13 C -0.07 -0.18 6.21 -104.16 -0.65 -0.82 16 14 C -0.09 -0.22 9.83 36.01 0.35 0.13 16 15 C -0.17 -0.25 10.66 -39.98 -0.43 -0.68 16 16 C 0.01 -0.01 6.10 -81.95 -0.50 -0.51 16 17 C -0.04 0.06 2.98 36.00 0.11 0.17 16 18 O -0.53 0.53 12.88 -35.23 -0.45 0.08 16 19 Si 0.67 -2.16 30.98 -169.99 -5.27 -7.43 16 20 N -0.54 0.72 5.47 -5.70 -0.03 0.69 16 21 C -0.15 0.34 7.48 -25.78 -0.19 0.15 16 22 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 23 H 0.04 -0.09 8.14 -51.92 -0.42 -0.51 16 24 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 25 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 26 H 0.10 -0.08 8.10 -51.93 -0.42 -0.50 16 27 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.08 0.02 7.85 -51.93 -0.41 -0.39 16 29 H 0.39 -1.55 7.60 -40.82 -0.31 -1.86 16 30 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 31 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 32 H 0.08 0.32 6.49 -51.93 -0.34 -0.02 16 33 H 0.15 0.12 8.06 -52.49 -0.42 -0.30 16 34 H 0.13 -0.18 7.96 -51.93 -0.41 -0.59 16 35 H 0.38 -1.81 8.70 45.56 0.40 -1.41 16 36 H -0.25 0.30 7.11 56.52 0.40 0.70 16 37 H -0.24 -0.05 7.11 56.52 0.40 0.35 16 38 H 0.41 -1.83 6.00 -40.82 -0.24 -2.07 16 39 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 40 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 LS Contribution 334.42 15.07 5.04 5.04 Total: 0.00 -8.26 334.42 -8.89 -17.14 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -5.98 Total: -11.98 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -1.55 Total: -0.14 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -0.37 Total: 1.10 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.75 Total: -3.73 kcal Atomic # 14 Polarization: -2.16 SS G_CDS: -5.27 Total: -7.43 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -8.26 -8.89 -17.14 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_13940406.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.882 kcal (2) G-P(sol) polarization free energy of solvation -8.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.141 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.145 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.027 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds