Wall clock time and date at job start Tue Mar 9 2021 13:02:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42899 * 113.99629 * 2 1 4 4 H 1.09003 * 112.85355 * 18.80456 * 3 2 1 5 5 C 1.53782 * 113.61338 * 150.00210 * 3 2 1 6 6 C 1.53784 * 87.08244 * 139.98155 * 5 3 2 7 7 H 1.08998 * 113.61697 * 89.20000 * 6 5 3 8 8 C 1.53000 * 113.61488 * 220.01991 * 6 5 3 9 9 N 1.46497 * 109.47491 * 184.99872 * 8 6 5 10 10 C 1.34775 * 120.00182 * 179.97438 * 9 8 6 11 11 O 1.21275 * 119.99985 * 0.02562 * 10 9 8 12 12 C 1.50703 * 119.99716 * 180.02562 * 10 9 8 13 13 C 1.53000 * 109.47025 * 180.02562 * 12 10 9 14 14 O 1.42894 * 109.47335 * 179.97438 * 13 12 10 15 15 C 1.35898 * 117.00202 * 179.97438 * 14 13 12 16 16 C 1.38735 * 120.05723 * 359.73479 * 15 14 13 17 17 C 1.38138 * 119.94707 * 179.74186 * 16 15 14 18 18 C 1.38270 * 120.05482 * 0.50722 * 17 16 15 19 19 C 1.50701 * 119.94483 * 179.74754 * 18 17 16 20 20 O 1.42904 * 109.46801 * 245.02045 * 19 18 17 21 21 Si 1.86301 * 109.47095 * 5.01714 * 19 18 17 22 22 C 1.38265 * 120.10905 * 359.76604 * 18 17 16 23 23 C 1.38138 * 120.05969 * 359.97438 * 22 18 17 24 24 C 1.53784 * 87.08116 * 334.56759 * 6 5 3 25 25 H 1.09002 * 109.47382 * 59.99956 * 1 2 3 26 26 H 1.09001 * 109.46938 * 299.99942 * 1 2 3 27 27 H 1.09004 * 109.46926 * 180.02562 * 1 2 3 28 28 H 1.09000 * 113.61596 * 254.52893 * 5 3 2 29 29 H 1.08998 * 113.61434 * 25.42883 * 5 3 2 30 30 H 1.09000 * 109.47037 * 305.00263 * 8 6 5 31 31 H 1.09002 * 109.46874 * 64.99682 * 8 6 5 32 32 H 0.97005 * 119.99512 * 359.97438 * 9 8 6 33 33 H 1.09007 * 109.47074 * 299.99694 * 12 10 9 34 34 H 1.08997 * 109.47200 * 59.99830 * 12 10 9 35 35 H 1.09000 * 109.47037 * 300.00389 * 13 12 10 36 36 H 1.09010 * 109.47116 * 59.99878 * 13 12 10 37 37 H 1.08001 * 120.02631 * 359.97438 * 16 15 14 38 38 H 1.08002 * 119.97768 * 180.22804 * 17 16 15 39 39 H 1.09001 * 109.47040 * 125.01867 * 19 18 17 40 40 H 0.96695 * 114.00246 * 59.99891 * 20 19 18 41 41 H 1.48494 * 109.99928 * 180.02562 * 21 19 18 42 42 H 1.48494 * 110.00092 * 301.32278 * 21 19 18 43 43 H 1.08007 * 119.96958 * 179.97438 * 22 18 17 44 44 H 1.07999 * 120.03159 * 179.97438 * 23 22 18 45 45 H 1.08999 * 113.61243 * 270.88512 * 24 6 5 46 46 H 1.08998 * 113.61929 * 139.98335 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 0.3238 5 6 3.3755 1.3720 0.7045 6 6 3.8226 2.3183 -0.4222 7 1 3.6234 3.3696 -0.2143 8 6 5.2542 2.0682 -0.9007 9 7 5.6260 3.0888 -1.8837 10 6 6.8508 3.0687 -2.4457 11 8 7.6450 2.2054 -2.1381 12 6 7.2333 4.1191 -3.4565 13 6 8.6648 3.8689 -3.9351 14 8 9.0274 4.8644 -4.8939 15 6 10.2771 4.7863 -5.4219 16 6 11.1388 3.7755 -5.0213 17 6 12.4068 3.6951 -5.5635 18 6 12.8212 4.6272 -6.4970 19 6 14.2070 4.5405 -7.0827 20 8 14.9643 5.6855 -6.6857 21 14 15.0465 2.9961 -6.4654 22 6 11.9663 5.6389 -6.8938 23 6 10.6954 5.7205 -6.3585 24 6 2.7534 1.6490 -1.3018 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 3.3384 1.8471 1.6848 29 1 3.9088 0.4214 0.7137 30 1 5.9351 2.1171 -0.0510 31 1 5.3166 1.0816 -1.3600 32 1 4.9905 3.7791 -2.1300 33 1 6.5526 4.0703 -4.3065 34 1 7.1705 5.1055 -2.9969 35 1 9.3457 3.9173 -3.0853 36 1 8.7271 2.8825 -4.3948 37 1 10.8172 3.0499 -4.2889 38 1 13.0767 2.9063 -5.2547 39 1 14.1405 4.5080 -8.1702 40 1 15.0644 5.7783 -5.7285 41 1 16.4143 2.8992 -7.0353 42 1 15.1148 3.0135 -4.9821 43 1 12.2924 6.3660 -7.6228 44 1 10.0282 6.5111 -6.6684 45 1 3.1166 0.7742 -1.8411 46 1 2.2139 2.3477 -1.9412 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:36 Heat of formation + Delta-G solvation = -100.039705 kcal Electronic energy + Delta-G solvation = -25674.790293 eV Core-core repulsion = 21725.357813 eV Total energy + Delta-G solvation = -3949.432481 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.39154 -41.01460 -40.28685 -39.13162 -37.53234 -37.21637 -35.32267 -33.43088 -32.02017 -31.44401 -29.35825 -27.57164 -26.84673 -26.43117 -25.43335 -23.68810 -23.07720 -22.16411 -21.62288 -20.61223 -19.47969 -18.39314 -18.13291 -17.57527 -17.52280 -17.12766 -16.81103 -16.72500 -16.42876 -16.28640 -16.07559 -15.94931 -15.62744 -15.39051 -14.70072 -14.68310 -14.50630 -14.35080 -14.19973 -13.84182 -13.66096 -13.54844 -13.40422 -13.03368 -12.87813 -12.82334 -12.60224 -12.15271 -12.08290 -12.02891 -11.84767 -11.78228 -11.56124 -11.50536 -10.98253 -10.53137 -10.51521 -10.17878 -9.97840 -9.15644 -4.92193 0.34761 0.37206 1.33536 1.52366 1.62759 1.68179 1.99782 2.44111 2.71434 2.76430 3.33676 3.42725 3.43966 3.51676 3.65761 3.67502 3.74453 3.81234 3.85839 3.86221 3.96585 4.01329 4.13937 4.27396 4.32859 4.33783 4.39451 4.40839 4.55014 4.57350 4.59257 4.60503 4.64138 4.69618 4.71774 4.74805 4.77826 4.86697 5.00592 5.01146 5.14664 5.23499 5.33233 5.34685 5.54889 5.76347 6.19520 6.31702 6.39463 6.45351 7.08177 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.089 0.911 5 C -0.127 4.127 6 C -0.125 4.125 7 H 0.100 0.900 8 C 0.131 3.869 9 N -0.728 5.728 10 C 0.519 3.481 11 O -0.538 6.538 12 C -0.141 4.141 13 C 0.074 3.926 14 O -0.316 6.316 15 C 0.138 3.862 16 C -0.203 4.203 17 C -0.077 4.077 18 C -0.157 4.157 19 C -0.069 4.069 20 O -0.531 6.531 21 Si 0.683 3.317 22 C -0.053 4.053 23 C -0.151 4.151 24 C -0.151 4.151 25 H 0.042 0.958 26 H 0.042 0.958 27 H 0.087 0.913 28 H 0.077 0.923 29 H 0.096 0.904 30 H 0.072 0.928 31 H 0.073 0.927 32 H 0.403 0.597 33 H 0.107 0.893 34 H 0.107 0.893 35 H 0.073 0.927 36 H 0.074 0.926 37 H 0.134 0.866 38 H 0.129 0.871 39 H 0.117 0.883 40 H 0.375 0.625 41 H -0.257 1.257 42 H -0.261 1.261 43 H 0.133 0.867 44 H 0.133 0.867 45 H 0.094 0.906 46 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.124 0.929 0.751 6.239 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.107 0.893 5 C -0.165 4.165 6 C -0.144 4.144 7 H 0.118 0.882 8 C 0.008 3.992 9 N -0.380 5.380 10 C 0.305 3.695 11 O -0.415 6.415 12 C -0.181 4.181 13 C -0.002 4.002 14 O -0.230 6.230 15 C 0.093 3.907 16 C -0.221 4.221 17 C -0.095 4.095 18 C -0.157 4.157 19 C -0.179 4.179 20 O -0.337 6.337 21 Si 0.584 3.416 22 C -0.071 4.071 23 C -0.169 4.169 24 C -0.189 4.189 25 H 0.061 0.939 26 H 0.061 0.939 27 H 0.105 0.895 28 H 0.096 0.904 29 H 0.115 0.885 30 H 0.090 0.910 31 H 0.091 0.909 32 H 0.237 0.763 33 H 0.126 0.874 34 H 0.125 0.875 35 H 0.091 0.909 36 H 0.092 0.908 37 H 0.152 0.848 38 H 0.146 0.854 39 H 0.135 0.865 40 H 0.223 0.777 41 H -0.183 1.183 42 H -0.186 1.186 43 H 0.151 0.849 44 H 0.151 0.849 45 H 0.112 0.888 46 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -4.895 0.005 0.756 4.953 hybrid contribution -0.469 1.407 0.732 1.654 sum -5.364 1.412 1.488 5.743 Atomic orbital electron populations 1.22820 0.80892 1.03061 0.99998 1.87964 1.19888 1.27136 1.94548 1.23697 0.93919 0.85580 0.96636 0.89338 1.23217 0.95367 1.00223 0.97696 1.22575 0.93677 1.00112 0.97989 0.88179 1.21364 0.94475 0.91684 0.91680 1.45950 1.15441 1.32347 1.44238 1.20287 0.81763 0.85773 0.81679 1.90759 1.50211 1.38032 1.62494 1.21467 0.97304 0.99872 0.99482 1.22431 0.95155 0.91135 0.91478 1.85972 1.28909 1.51889 1.56228 1.19000 0.83762 0.94607 0.93370 1.21270 0.95277 1.00833 1.04757 1.20854 0.95663 0.97633 0.95301 1.20169 0.97258 0.97883 1.00411 1.24933 0.90565 0.98297 1.04100 1.86594 1.74021 1.44887 1.28231 0.95000 0.82504 0.83218 0.80831 1.20834 0.91702 0.96726 0.97835 1.20502 0.97275 1.00213 0.98960 1.23632 0.97066 1.01040 0.97139 0.93947 0.93901 0.89488 0.90399 0.88541 0.90952 0.90854 0.76250 0.87436 0.87492 0.90914 0.90777 0.84804 0.85350 0.86506 0.77701 1.18255 1.18636 0.84933 0.84875 0.88798 0.91025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.49 10.71 -35.23 -0.38 -0.86 16 3 C 0.06 -0.07 4.31 -25.92 -0.11 -0.18 16 4 H 0.09 -0.21 7.87 -51.93 -0.41 -0.62 16 5 C -0.13 0.22 7.47 -25.92 -0.19 0.03 16 6 C -0.12 0.36 3.76 -89.80 -0.34 0.02 16 7 H 0.10 -0.41 8.14 -51.93 -0.42 -0.84 16 8 C 0.13 -0.17 5.51 -4.04 -0.02 -0.20 16 9 N -0.73 1.49 5.56 -60.30 -0.33 1.16 16 10 C 0.52 0.12 7.83 -10.98 -0.09 0.03 16 11 O -0.54 -2.37 15.98 5.56 0.09 -2.28 16 12 C -0.14 0.28 6.07 -27.88 -0.17 0.11 16 13 C 0.07 0.01 4.03 37.16 0.15 0.16 16 14 O -0.32 -0.49 10.14 -19.42 -0.20 -0.69 16 15 C 0.14 0.27 6.69 -39.21 -0.26 0.01 16 16 C -0.20 -0.27 9.04 -39.43 -0.36 -0.63 16 17 C -0.08 -0.06 8.66 -39.61 -0.34 -0.40 16 18 C -0.16 -0.15 5.35 -104.60 -0.56 -0.70 16 19 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 20 O -0.53 -0.97 12.83 -35.23 -0.45 -1.42 16 21 Si 0.68 -0.16 29.88 -169.99 -5.08 -5.24 16 22 C -0.05 -0.06 9.68 -39.61 -0.38 -0.44 16 23 C -0.15 -0.22 9.99 -39.43 -0.39 -0.61 16 24 C -0.15 0.31 7.46 -25.91 -0.19 0.11 16 25 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 26 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 27 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 28 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 29 H 0.10 -0.08 8.10 -51.93 -0.42 -0.50 16 30 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 0.00 7.84 -51.93 -0.41 -0.40 16 32 H 0.40 -1.93 8.47 -40.82 -0.35 -2.27 16 33 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 34 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 35 H 0.07 0.04 7.61 -51.93 -0.39 -0.35 16 36 H 0.07 0.03 7.63 -51.92 -0.40 -0.36 16 37 H 0.13 0.05 6.30 -52.49 -0.33 -0.29 16 38 H 0.13 -0.09 4.83 -52.49 -0.25 -0.35 16 39 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 40 H 0.38 -0.33 8.70 45.56 0.40 0.07 16 41 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 42 H -0.26 -0.46 7.00 56.52 0.40 -0.06 16 43 H 0.13 0.01 8.06 -52.48 -0.42 -0.41 16 44 H 0.13 0.03 8.06 -52.49 -0.42 -0.40 16 45 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 46 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 LS Contribution 381.31 15.07 5.75 5.75 Total: 0.00 -8.15 381.31 -9.91 -18.06 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -7.24 Total: -12.93 kcal Atomic # 6 Polarization: 0.52 SS G_CDS: -2.07 Total: -1.55 kcal Atomic # 7 Polarization: 1.49 SS G_CDS: -0.33 Total: 1.16 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -0.94 Total: -5.25 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.08 Total: -5.24 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -8.15 -9.91 -18.06 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.978 kcal (2) G-P(sol) polarization free energy of solvation -8.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.062 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds