Wall clock time and date at job start Tue Mar 9 2021 13:03:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42889 * 114.00329 * 2 1 4 4 H 1.09004 * 112.84978 * 341.19267 * 3 2 1 5 5 C 1.53787 * 113.69282 * 112.46337 * 3 2 1 6 6 C 1.53777 * 87.08258 * 139.99242 * 5 3 2 7 7 H 1.09007 * 113.69036 * 89.12874 * 6 5 3 8 8 C 1.52996 * 113.61279 * 220.01941 * 6 5 3 9 9 N 1.46501 * 109.47205 * 272.49390 * 8 6 5 10 10 C 1.34777 * 120.00094 * 180.02562 * 9 8 6 11 11 O 1.21278 * 119.99800 * 0.02562 * 10 9 8 12 12 C 1.50697 * 119.99926 * 180.02562 * 10 9 8 13 13 N 1.46898 * 109.47095 * 180.02562 * 12 10 9 14 14 C 1.46906 * 110.99888 * 293.94952 * 13 12 10 15 15 C 1.39678 * 111.00362 * 169.99543 * 13 12 10 16 16 C 1.38886 * 120.07730 * 239.99702 * 15 13 12 17 17 C 1.50699 * 120.03573 * 359.95882 * 16 15 13 18 18 O 1.42895 * 109.47297 * 74.99760 * 17 16 15 19 19 Si 1.86308 * 109.46840 * 194.99708 * 17 16 15 20 20 C 1.38124 * 119.92562 * 179.97438 * 16 15 13 21 21 C 1.38266 * 120.07435 * 0.02563 * 20 16 15 22 22 C 1.50694 * 119.92568 * 179.97438 * 21 20 16 23 23 F 1.39901 * 109.47192 * 90.00157 * 22 21 20 24 24 F 1.39898 * 109.47519 * 210.00255 * 22 21 20 25 25 F 1.39901 * 109.47602 * 330.00267 * 22 21 20 26 26 C 1.38307 * 120.15063 * 359.97438 * 21 20 16 27 27 C 1.38086 * 120.07423 * 359.73381 * 26 21 20 28 28 C 1.53776 * 87.08440 * 334.57029 * 6 5 3 29 29 H 1.09003 * 109.46649 * 60.00047 * 1 2 3 30 30 H 1.08997 * 109.47214 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47333 * 300.00297 * 1 2 3 32 32 H 1.09002 * 113.61202 * 25.44338 * 5 3 2 33 33 H 1.08995 * 113.61331 * 254.54467 * 5 3 2 34 34 H 1.09001 * 109.46972 * 152.50058 * 8 6 5 35 35 H 1.08992 * 109.47549 * 32.49811 * 8 6 5 36 36 H 0.96998 * 119.99617 * 0.02562 * 9 8 6 37 37 H 1.08992 * 109.47804 * 59.99842 * 12 10 9 38 38 H 1.09003 * 109.46937 * 299.99587 * 12 10 9 39 39 H 1.09001 * 109.46544 * 60.00058 * 14 13 12 40 40 H 1.09001 * 109.47272 * 179.97438 * 14 13 12 41 41 H 1.09000 * 109.47033 * 300.00113 * 14 13 12 42 42 H 1.08998 * 109.47083 * 314.98968 * 17 16 15 43 43 H 0.96697 * 114.00063 * 299.99622 * 18 17 16 44 44 H 1.48501 * 109.99965 * 59.99744 * 19 17 16 45 45 H 1.48500 * 109.99726 * 181.31663 * 19 17 16 46 46 H 1.07999 * 119.96428 * 180.02562 * 20 16 15 47 47 H 1.07995 * 119.96508 * 180.02562 * 26 21 20 48 48 H 1.08001 * 120.03852 * 180.27262 * 27 26 21 49 49 H 1.08993 * 113.61980 * 139.97820 * 28 6 5 50 50 H 1.09008 * 113.61682 * 270.80504 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3053 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7532 1.6510 1.3014 6 6 3.8221 2.3197 0.4211 7 1 3.6223 3.3707 0.2118 8 6 5.2537 2.0711 0.9000 9 7 5.6248 3.0933 1.8816 10 6 6.8496 3.0747 2.4438 11 8 7.6447 2.2119 2.1367 12 6 7.2311 4.1259 3.4540 13 7 8.6061 3.8879 3.9128 14 6 8.6996 2.6298 4.6654 15 6 9.0730 4.9622 4.6736 16 6 10.1973 5.6679 4.2652 17 6 10.9162 5.2749 3.0004 18 8 10.1572 5.7038 1.8681 19 14 12.5952 6.0816 2.9642 20 6 10.6559 6.7301 5.0197 21 6 9.9974 7.0908 6.1807 22 6 10.5010 8.2498 7.0016 23 9 9.8902 9.4304 6.5655 24 9 10.1928 8.0356 8.3493 25 9 11.8877 8.3595 6.8522 26 6 8.8774 6.3902 6.5904 27 6 8.4100 5.3311 5.8376 28 6 3.3757 1.3718 -0.7045 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 3.1169 0.7770 1.8418 33 1 2.2133 2.3502 1.9398 34 1 5.9347 2.1193 0.0502 35 1 5.3168 1.0852 1.3605 36 1 4.9890 3.7835 2.1269 37 1 6.5505 4.0771 4.3039 38 1 7.1675 5.1120 2.9938 39 1 8.3960 1.8007 4.0263 40 1 9.7281 2.4779 4.9930 41 1 8.0442 2.6771 5.5351 42 1 11.0329 4.1916 2.9704 43 1 9.2699 5.3224 1.8221 44 1 13.3944 5.6437 4.1367 45 1 13.3018 5.7275 1.7070 46 1 11.5299 7.2795 4.7024 47 1 8.3651 6.6747 7.4975 48 1 7.5329 4.7872 6.1558 49 1 3.3382 1.8456 -1.6853 50 1 3.9105 0.4220 -0.7133 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:28 Heat of formation + Delta-G solvation = -188.627710 kcal Electronic energy + Delta-G solvation = -36679.394195 eV Core-core repulsion = 31259.939367 eV Total energy + Delta-G solvation = -5419.454829 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.165 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -51.13189 -48.65021 -48.58427 -41.88901 -40.99863 -40.25149 -37.95060 -37.54057 -37.35696 -35.30573 -33.06405 -32.25886 -30.51253 -28.59811 -27.72136 -27.31973 -26.95194 -26.79397 -25.10918 -23.68385 -23.15130 -22.11220 -21.66546 -20.63433 -19.53517 -19.44995 -19.40895 -18.60188 -18.24657 -18.03721 -17.45429 -17.12179 -16.96307 -16.76207 -16.57726 -16.24565 -16.12944 -16.03985 -15.55279 -15.51036 -15.40306 -15.28709 -15.09697 -15.01729 -14.83183 -14.76165 -14.73516 -14.65639 -14.26103 -14.14144 -14.02918 -13.71387 -13.60965 -13.56642 -13.27812 -13.13476 -12.99957 -12.90041 -12.66154 -12.57020 -12.08886 -12.01363 -11.85951 -11.56854 -11.39929 -11.10566 -10.90995 -10.53136 -10.33760 -10.19144 -10.14362 -9.82270 -4.87500 -0.45120 -0.08427 1.40102 1.52144 1.60932 1.66952 1.78232 2.04917 2.09291 2.52911 2.69182 2.74909 2.95073 3.30089 3.39773 3.39834 3.43323 3.53387 3.58426 3.64418 3.67889 3.80994 3.82399 3.87709 3.94620 3.96369 4.06487 4.10256 4.12830 4.28948 4.32374 4.35675 4.37749 4.41198 4.52931 4.56165 4.57980 4.67822 4.70331 4.73529 4.81740 4.84783 4.87182 4.93151 4.99682 5.04304 5.14386 5.26681 5.33960 5.40233 5.93962 6.18045 6.34625 6.60252 7.12324 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.089 0.911 5 C -0.151 4.151 6 C -0.124 4.124 7 H 0.100 0.900 8 C 0.134 3.866 9 N -0.730 5.730 10 C 0.513 3.487 11 O -0.516 6.516 12 C 0.034 3.966 13 N -0.493 5.493 14 C 0.020 3.980 15 C 0.127 3.873 16 C -0.088 4.088 17 C -0.064 4.064 18 O -0.530 6.530 19 Si 0.728 3.272 20 C -0.054 4.054 21 C -0.177 4.177 22 C 0.509 3.491 23 F -0.173 7.173 24 F -0.176 7.176 25 F -0.174 7.174 26 C -0.056 4.056 27 C -0.147 4.147 28 C -0.127 4.127 29 H 0.043 0.957 30 H 0.087 0.913 31 H 0.042 0.958 32 H 0.093 0.907 33 H 0.070 0.930 34 H 0.073 0.927 35 H 0.072 0.928 36 H 0.401 0.599 37 H 0.074 0.926 38 H 0.110 0.890 39 H 0.098 0.902 40 H 0.073 0.927 41 H 0.032 0.968 42 H 0.086 0.914 43 H 0.365 0.635 44 H -0.248 1.248 45 H -0.250 1.250 46 H 0.146 0.854 47 H 0.141 0.859 48 H 0.135 0.865 49 H 0.077 0.923 50 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.828 1.495 0.375 6.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.106 0.894 5 C -0.189 4.189 6 C -0.143 4.143 7 H 0.118 0.882 8 C 0.010 3.990 9 N -0.383 5.383 10 C 0.298 3.702 11 O -0.391 6.391 12 C -0.095 4.095 13 N -0.214 5.214 14 C -0.125 4.125 15 C 0.033 3.967 16 C -0.089 4.089 17 C -0.173 4.173 18 O -0.336 6.336 19 Si 0.626 3.374 20 C -0.072 4.072 21 C -0.178 4.178 22 C 0.455 3.545 23 F -0.154 7.154 24 F -0.157 7.157 25 F -0.155 7.155 26 C -0.074 4.074 27 C -0.167 4.167 28 C -0.165 4.165 29 H 0.061 0.939 30 H 0.105 0.895 31 H 0.060 0.940 32 H 0.111 0.889 33 H 0.089 0.911 34 H 0.091 0.909 35 H 0.090 0.910 36 H 0.235 0.765 37 H 0.092 0.908 38 H 0.128 0.872 39 H 0.117 0.883 40 H 0.092 0.908 41 H 0.051 0.949 42 H 0.103 0.897 43 H 0.213 0.787 44 H -0.172 1.172 45 H -0.175 1.175 46 H 0.163 0.837 47 H 0.159 0.841 48 H 0.153 0.847 49 H 0.096 0.904 50 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -4.419 0.836 -0.426 4.517 hybrid contribution -2.195 -0.559 1.229 2.577 sum -6.614 0.277 0.804 6.668 Atomic orbital electron populations 1.22818 0.80892 1.03060 0.99996 1.87961 1.19884 1.27151 1.94543 1.23692 0.93933 0.85571 0.96620 0.89355 1.23626 0.97114 1.00979 0.97143 1.22568 0.93687 1.00100 0.97933 0.88174 1.21331 0.94432 0.91494 0.91698 1.45954 1.15388 1.32369 1.44579 1.20324 0.81654 0.86113 0.82079 1.90734 1.49634 1.37344 1.61370 1.22124 0.89566 0.99610 0.98250 1.59270 1.20678 1.01780 1.39711 1.22682 1.02527 0.90782 0.96545 1.18843 0.94332 0.92048 0.91464 1.20259 0.96025 0.94918 0.97701 1.25322 1.05010 1.03573 0.83429 1.86724 1.30823 1.72315 1.43692 0.93338 0.71986 0.91224 0.80841 1.20743 0.98646 0.95370 0.92490 1.19982 1.00612 0.98739 0.98501 1.18224 0.75571 0.82638 0.78111 1.93255 1.82909 1.49890 1.89346 1.93209 1.92766 1.94781 1.34931 1.93219 1.30419 1.96427 1.95433 1.20865 0.93635 0.93703 0.99234 1.21675 1.01284 0.98222 0.95491 1.23213 0.95329 1.00215 0.97746 0.93881 0.89493 0.93972 0.88879 0.91099 0.90915 0.91014 0.76517 0.90825 0.87187 0.88316 0.90803 0.94945 0.89674 0.78745 1.17243 1.17467 0.83719 0.84143 0.84698 0.90384 0.88569 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.43 10.72 -35.23 -0.38 -0.80 16 3 C 0.06 -0.08 4.31 -25.91 -0.11 -0.19 16 4 H 0.09 -0.23 7.87 -51.93 -0.41 -0.64 16 5 C -0.15 0.36 7.47 -25.92 -0.19 0.17 16 6 C -0.12 0.40 3.75 -89.81 -0.34 0.07 16 7 H 0.10 -0.45 8.14 -51.92 -0.42 -0.87 16 8 C 0.13 -0.24 5.51 -4.04 -0.02 -0.26 16 9 N -0.73 2.08 5.56 -60.30 -0.34 1.74 16 10 C 0.51 -0.33 7.55 -10.99 -0.08 -0.41 16 11 O -0.52 -1.87 14.31 5.56 0.08 -1.79 16 12 C 0.03 -0.10 4.90 -4.98 -0.02 -0.12 16 13 N -0.49 0.38 3.19 -180.33 -0.58 -0.20 16 14 C 0.02 -0.01 8.94 60.07 0.54 0.53 16 15 C 0.13 -0.09 4.61 -83.78 -0.39 -0.47 16 16 C -0.09 -0.02 5.28 -104.42 -0.55 -0.57 16 17 C -0.06 -0.07 2.30 36.00 0.08 0.01 16 18 O -0.53 -0.96 12.65 -35.23 -0.45 -1.41 16 19 Si 0.73 0.48 30.17 -169.99 -5.13 -4.65 16 20 C -0.05 0.00 8.01 -39.61 -0.32 -0.31 16 21 C -0.18 0.01 5.46 -104.59 -0.57 -0.56 16 22 C 0.51 0.38 3.36 36.00 0.12 0.50 16 23 F -0.17 -0.24 17.30 2.25 0.04 -0.20 16 24 F -0.18 -0.22 16.46 2.25 0.04 -0.18 16 25 F -0.17 -0.23 16.46 2.25 0.04 -0.20 16 26 C -0.06 0.07 9.39 -39.61 -0.37 -0.30 16 27 C -0.15 0.27 8.71 -39.38 -0.34 -0.07 16 28 C -0.13 0.24 7.47 -25.92 -0.19 0.05 16 29 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 32 H 0.09 -0.10 7.90 -51.93 -0.41 -0.51 16 33 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 34 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.07 -0.03 7.84 -51.93 -0.41 -0.43 16 36 H 0.40 -2.20 8.47 -40.82 -0.35 -2.55 16 37 H 0.07 -0.34 7.46 -51.93 -0.39 -0.73 16 38 H 0.11 -0.47 8.06 -51.93 -0.42 -0.89 16 39 H 0.10 0.13 5.88 -51.93 -0.31 -0.17 16 40 H 0.07 0.00 8.12 -51.93 -0.42 -0.42 16 41 H 0.03 -0.06 7.49 -51.93 -0.39 -0.44 16 42 H 0.09 0.17 7.78 -51.93 -0.40 -0.24 16 43 H 0.36 0.12 8.38 45.56 0.38 0.50 16 44 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 45 H -0.25 -0.90 7.11 56.52 0.40 -0.50 16 46 H 0.15 -0.19 4.67 -52.49 -0.25 -0.43 16 47 H 0.14 -0.39 7.60 -52.49 -0.40 -0.79 16 48 H 0.14 -0.50 7.17 -52.49 -0.38 -0.87 16 49 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 50 H 0.10 -0.09 8.10 -51.92 -0.42 -0.51 16 LS Contribution 418.67 15.07 6.31 6.31 Total: 0.00 -7.02 418.67 -9.14 -16.16 By element: Atomic # 1 Polarization: -6.79 SS G_CDS: -7.11 Total: -13.90 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -1.67 Total: -0.89 kcal Atomic # 7 Polarization: 2.46 SS G_CDS: -0.91 Total: 1.55 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.74 Total: -4.00 kcal Atomic # 9 Polarization: -0.69 SS G_CDS: 0.11 Total: -0.58 kcal Atomic # 14 Polarization: 0.48 SS G_CDS: -5.13 Total: -4.65 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -7.02 -9.14 -16.16 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -172.464 kcal (2) G-P(sol) polarization free energy of solvation -7.021 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.485 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.163 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.628 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds