Wall clock time and date at job start Tue Mar 9 2021 13:06:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37871 * 126.45654 * 2 1 4 4 C 1.46683 * 126.23314 * 359.92278 * 3 2 1 5 5 O 1.21696 * 119.99692 * 0.02562 * 4 3 2 6 6 N 1.34779 * 119.99715 * 180.02562 * 4 3 2 7 7 C 1.46494 * 119.99525 * 179.97438 * 6 4 3 8 8 H 1.09000 * 112.91148 * 23.75262 * 7 6 4 9 9 C 1.53786 * 113.61370 * 155.00031 * 7 6 4 10 10 C 1.53781 * 87.17350 * 140.02367 * 9 7 6 11 11 H 1.08999 * 113.61567 * 89.07405 * 10 9 7 12 12 C 1.52991 * 113.61529 * 219.97788 * 10 9 7 13 13 O 1.42901 * 109.47409 * 185.00009 * 12 10 9 14 14 C 1.53781 * 87.08070 * 334.52830 * 10 9 7 15 15 N 1.37649 * 107.53195 * 180.19065 * 3 2 1 16 16 C 1.35529 * 108.64892 * 359.62103 * 15 3 2 17 17 C 1.50693 * 125.56976 * 180.10995 * 16 15 3 18 18 O 1.42907 * 109.46795 * 65.28994 * 17 16 15 19 19 Si 1.86302 * 109.47522 * 185.28735 * 17 16 15 20 20 C 1.35455 * 108.86984 * 0.38281 * 16 15 3 21 21 H 1.09001 * 109.46688 * 90.00598 * 1 2 3 22 22 H 1.09002 * 109.47052 * 210.00444 * 1 2 3 23 23 H 1.09000 * 109.47189 * 330.00319 * 1 2 3 24 24 H 0.97000 * 119.99938 * 359.97438 * 6 4 3 25 25 H 1.09002 * 113.61357 * 25.43283 * 9 7 6 26 26 H 1.09002 * 113.61608 * 254.61445 * 9 7 6 27 27 H 1.08997 * 109.47550 * 304.99814 * 12 10 9 28 28 H 1.09002 * 109.47334 * 65.00084 * 12 10 9 29 29 H 0.96701 * 114.00364 * 179.97438 * 13 12 10 30 30 H 1.09005 * 113.61471 * 139.98321 * 14 10 9 31 31 H 1.09003 * 113.61469 * 270.88099 * 14 10 9 32 32 H 0.97001 * 125.67594 * 179.73911 * 15 3 2 33 33 H 1.09000 * 109.47188 * 305.29444 * 17 16 15 34 34 H 0.96699 * 114.00196 * 60.00416 * 18 17 16 35 35 H 1.48501 * 110.00038 * 179.97438 * 19 17 16 36 36 H 1.48500 * 109.99758 * 301.32297 * 19 17 16 37 37 H 1.08000 * 126.07236 * 179.74864 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5093 -0.0016 5 8 0.7026 2.7766 -0.0026 6 7 2.8037 3.4999 -0.0019 7 6 2.3678 4.8985 -0.0041 8 1 1.3638 5.0307 0.3992 9 6 3.4031 5.8674 0.5912 10 6 3.0224 6.8448 -0.5333 11 1 2.1970 7.5080 -0.2745 12 6 4.2189 7.5881 -1.1304 13 8 3.7562 8.5511 -2.0794 14 6 2.5915 5.6147 -1.3495 15 7 3.6283 0.6625 -0.0044 16 6 3.6218 -0.6928 0.0015 17 6 4.8434 -1.5752 0.0017 18 8 5.5628 -1.3923 1.2228 19 14 4.3222 -3.3573 -0.1510 20 6 2.3380 -1.1247 0.0009 21 1 -0.3633 -0.0001 -1.0277 22 1 -0.3633 -0.8900 0.5139 23 1 -0.3633 0.8900 0.5138 24 1 3.7500 3.2868 -0.0007 25 1 4.4289 5.5046 0.5257 26 1 3.1436 6.2256 1.5875 27 1 4.7653 8.0952 -0.3352 28 1 4.8779 6.8761 -1.6273 29 1 4.4627 9.0612 -2.4985 30 1 1.6756 5.7683 -1.9202 31 1 3.3954 5.1828 -1.9456 32 1 4.4190 1.2244 -0.0090 33 1 5.4832 -1.3103 -0.8401 34 1 5.0537 -1.6097 2.0157 35 1 5.5181 -4.2379 -0.1526 36 1 3.4238 -3.7219 0.9738 37 1 2.0137 -2.1549 0.0009 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_13940406.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:47 Heat of formation + Delta-G solvation = -52.822713 kcal Electronic energy + Delta-G solvation = -20228.746775 eV Core-core repulsion = 16973.919436 eV Total energy + Delta-G solvation = -3254.827339 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -42.59789 -40.98813 -39.37059 -37.91891 -37.29661 -34.78440 -33.38461 -31.67521 -29.01865 -28.14604 -26.88070 -26.78766 -23.86485 -22.13793 -21.53706 -21.17356 -20.21053 -19.47164 -18.34571 -18.14331 -17.43060 -16.78354 -16.50672 -16.32572 -16.06923 -15.55594 -15.35855 -15.18611 -14.67071 -14.57892 -14.27237 -13.86749 -13.63178 -13.58337 -13.47498 -13.36830 -12.93599 -12.78435 -12.35074 -12.23653 -11.88279 -11.82782 -11.57100 -11.07839 -10.93973 -10.78745 -10.14242 -9.82817 -9.16997 -4.99379 0.36183 1.09312 1.54018 1.57872 1.81372 2.02707 2.14653 2.35635 3.06044 3.17835 3.34398 3.50139 3.52692 3.69846 3.80782 3.90660 4.15186 4.17744 4.26881 4.33072 4.37833 4.46220 4.52428 4.63439 4.71474 4.74570 4.84580 4.91492 4.99068 5.03782 5.17800 5.22385 5.39869 5.48116 5.65811 5.90738 6.19107 6.24307 6.44210 6.60840 7.14966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.063 4.063 3 C -0.056 4.056 4 C 0.591 3.409 5 O -0.521 6.521 6 N -0.723 5.723 7 C 0.124 3.876 8 H 0.121 0.879 9 C -0.139 4.139 10 C -0.108 4.108 11 H 0.104 0.896 12 C 0.087 3.913 13 O -0.573 6.573 14 C -0.143 4.143 15 N -0.525 5.525 16 C 0.028 3.972 17 C -0.061 4.061 18 O -0.534 6.534 19 Si 0.718 3.282 20 C -0.200 4.200 21 H 0.071 0.929 22 H 0.064 0.936 23 H 0.081 0.919 24 H 0.394 0.606 25 H 0.087 0.913 26 H 0.081 0.919 27 H 0.048 0.952 28 H 0.046 0.954 29 H 0.381 0.619 30 H 0.077 0.923 31 H 0.084 0.916 32 H 0.416 0.584 33 H 0.119 0.881 34 H 0.380 0.620 35 H -0.255 1.255 36 H -0.254 1.254 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.967 -0.471 -0.965 4.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.072 4.072 3 C -0.169 4.169 4 C 0.379 3.621 5 O -0.396 6.396 6 N -0.373 5.373 7 C 0.020 3.980 8 H 0.139 0.861 9 C -0.177 4.177 10 C -0.127 4.127 11 H 0.122 0.878 12 C 0.009 3.991 13 O -0.378 6.378 14 C -0.182 4.182 15 N -0.121 5.121 16 C -0.090 4.090 17 C -0.171 4.171 18 O -0.341 6.341 19 Si 0.616 3.384 20 C -0.225 4.225 21 H 0.089 0.911 22 H 0.083 0.917 23 H 0.099 0.901 24 H 0.227 0.773 25 H 0.105 0.895 26 H 0.100 0.900 27 H 0.066 0.934 28 H 0.064 0.936 29 H 0.228 0.772 30 H 0.096 0.904 31 H 0.102 0.898 32 H 0.253 0.747 33 H 0.137 0.863 34 H 0.229 0.771 35 H -0.180 1.180 36 H -0.179 1.179 37 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.094 -0.987 -0.810 3.347 hybrid contribution 1.751 0.941 0.931 2.195 sum 4.845 -0.047 0.121 4.847 Atomic orbital electron populations 1.20398 0.88817 1.03191 1.02652 1.19950 0.96069 0.90323 1.00834 1.20256 0.83543 0.93561 1.19559 1.17071 0.85938 0.82998 0.76066 1.90841 1.15891 1.83139 1.49734 1.45874 1.09076 1.06185 1.76204 1.22587 0.99920 0.78277 0.97239 0.86119 1.23368 0.99489 0.95816 0.99066 1.22331 0.98832 0.95215 0.96334 0.87803 1.22136 0.95198 0.90644 0.91101 1.86499 1.38065 1.54030 1.59222 1.23574 1.02609 0.95209 0.96821 1.41856 1.07117 1.06572 1.56573 1.21031 0.96808 0.83263 1.07941 1.24897 0.92712 1.09524 0.89920 1.86594 1.42516 1.89445 1.15523 0.94202 0.81643 0.72187 0.90341 1.20637 0.90849 0.99187 1.11804 0.91057 0.91667 0.90061 0.77267 0.89496 0.90030 0.93395 0.93588 0.77190 0.90426 0.89774 0.74694 0.86314 0.77123 1.18015 1.17858 0.83225 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.18 9.83 36.01 0.35 0.18 16 2 C -0.06 -0.14 6.21 -104.16 -0.65 -0.79 16 3 C -0.06 -0.10 7.06 -81.98 -0.58 -0.68 16 4 C 0.59 1.58 7.79 -12.85 -0.10 1.48 16 5 O -0.52 -3.13 14.40 5.19 0.07 -3.05 16 6 N -0.72 0.31 5.36 -54.18 -0.29 0.02 16 7 C 0.12 -0.03 4.25 -66.98 -0.28 -0.32 16 8 H 0.12 0.17 7.46 -51.93 -0.39 -0.22 16 9 C -0.14 0.30 7.39 -25.92 -0.19 0.11 16 10 C -0.11 0.09 4.01 -89.81 -0.36 -0.27 16 11 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 12 C 0.09 -0.11 6.88 37.15 0.26 0.15 16 13 O -0.57 -0.30 13.66 -35.23 -0.48 -0.78 16 14 C -0.14 0.03 7.44 -25.78 -0.19 -0.16 16 15 N -0.52 0.38 5.99 -5.70 -0.03 0.34 16 16 C 0.03 -0.01 6.46 -81.96 -0.53 -0.54 16 17 C -0.06 0.10 3.08 36.00 0.11 0.21 16 18 O -0.53 0.22 12.88 -35.23 -0.45 -0.23 16 19 Si 0.72 -1.53 30.56 -169.99 -5.19 -6.72 16 20 C -0.20 -0.08 9.27 -39.98 -0.37 -0.46 16 21 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 22 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 23 H 0.08 0.29 6.49 -51.93 -0.34 -0.05 16 24 H 0.39 -1.22 7.86 -40.82 -0.32 -1.54 16 25 H 0.09 -0.30 8.08 -51.93 -0.42 -0.72 16 26 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 27 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.05 -0.10 7.84 -51.93 -0.41 -0.51 16 29 H 0.38 -1.40 9.12 45.56 0.42 -0.98 16 30 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 31 H 0.08 -0.06 7.90 -51.93 -0.41 -0.47 16 32 H 0.42 -1.31 8.19 -40.82 -0.33 -1.64 16 33 H 0.12 -0.33 7.96 -51.93 -0.41 -0.74 16 34 H 0.38 -1.06 8.70 45.56 0.40 -0.66 16 35 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 36 H -0.25 0.00 7.11 56.52 0.40 0.40 16 37 H 0.15 -0.20 6.19 -52.49 -0.32 -0.52 16 LS Contribution 311.36 15.07 4.69 4.69 Total: 0.00 -8.39 311.36 -8.50 -16.89 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -4.28 Total: -10.09 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -2.53 Total: -1.07 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -0.32 Total: 0.37 kcal Atomic # 8 Polarization: -3.20 SS G_CDS: -0.86 Total: -4.06 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.19 Total: -6.72 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -8.39 -8.50 -16.89 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_13940406.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.933 kcal (2) G-P(sol) polarization free energy of solvation -8.394 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.326 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.497 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.890 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds