Wall clock time and date at job start Tue Mar 9 2021 13:07:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86297 * 109.46955 * 2 1 4 4 C 1.50705 * 109.46890 * 119.99993 * 2 1 3 5 5 C 1.38241 * 119.96892 * 245.02152 * 4 2 1 6 6 C 1.38290 * 120.10922 * 179.97438 * 5 4 2 7 7 C 1.38129 * 120.05662 * 359.68358 * 6 5 4 8 8 C 1.38756 * 119.94061 * 0.59068 * 7 6 5 9 9 O 1.35894 * 120.05705 * 179.70151 * 8 7 6 10 10 C 1.42904 * 117.00100 * 359.73008 * 9 8 7 11 11 C 1.52999 * 109.47519 * 179.97438 * 10 9 8 12 12 C 1.50698 * 109.47004 * 179.97438 * 11 10 9 13 13 O 1.21283 * 120.00472 * 0.02562 * 12 11 10 14 14 N 1.34777 * 119.99538 * 179.97438 * 12 11 10 15 15 C 1.46499 * 119.99665 * 179.72653 * 14 12 11 16 16 H 1.09002 * 112.85201 * 24.08188 * 15 14 12 17 17 C 1.53784 * 113.61491 * 155.28109 * 15 14 12 18 18 C 1.53783 * 87.08338 * 139.98310 * 17 15 14 19 19 H 1.08994 * 113.61765 * 89.19652 * 18 17 15 20 20 C 1.53002 * 113.60920 * 220.02037 * 18 17 15 21 21 O 1.42902 * 109.46644 * 184.99649 * 20 18 17 22 22 C 1.53780 * 87.07825 * 334.56565 * 18 17 15 23 23 C 1.38168 * 119.97091 * 65.00027 * 4 2 1 24 24 H 0.96700 * 114.00436 * 299.99805 * 1 2 3 25 25 H 1.08996 * 109.46989 * 239.99802 * 2 1 3 26 26 H 1.48502 * 109.99931 * 178.67818 * 3 2 1 27 27 H 1.48492 * 110.00184 * 299.99507 * 3 2 1 28 28 H 1.07994 * 119.94645 * 359.97438 * 5 4 2 29 29 H 1.07997 * 119.97188 * 179.97438 * 6 5 4 30 30 H 1.07999 * 120.02958 * 180.31912 * 7 6 5 31 31 H 1.09000 * 109.47055 * 59.99243 * 10 9 8 32 32 H 1.09007 * 109.46875 * 300.00253 * 10 9 8 33 33 H 1.09003 * 109.46690 * 59.99935 * 11 10 9 34 34 H 1.08993 * 109.46773 * 300.00271 * 11 10 9 35 35 H 0.97001 * 120.00485 * 0.02562 * 14 12 11 36 36 H 1.09000 * 113.61044 * 254.52540 * 17 15 14 37 37 H 1.09001 * 113.61354 * 25.42535 * 17 15 14 38 38 H 1.08994 * 109.47329 * 304.99447 * 20 18 17 39 39 H 1.08993 * 109.47199 * 64.99972 * 20 18 17 40 40 H 0.96706 * 113.99597 * 179.97438 * 21 20 18 41 41 H 1.08998 * 113.61772 * 270.88604 * 22 18 17 42 42 H 1.09001 * 113.61751 * 139.98662 * 22 18 17 43 43 H 1.07999 * 120.02788 * 0.04444 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6382 -0.0116 2.1912 6 6 3.1000 -0.6605 3.3217 7 6 2.8502 -2.0076 3.4968 8 6 2.1458 -2.7126 2.5313 9 8 1.9039 -4.0393 2.6982 10 6 2.4092 -4.6461 3.8893 11 6 2.0410 -6.1311 3.9010 12 6 2.5745 -6.7709 5.1568 13 8 3.1883 -6.1048 5.9633 14 7 2.3685 -8.0833 5.3842 15 6 2.8923 -8.7067 6.6020 16 1 3.0456 -7.9924 7.4110 17 6 2.1206 -9.9661 7.0303 18 6 3.4829 -10.5841 7.3868 19 1 3.7982 -10.3848 8.4109 20 6 3.6051 -12.0604 7.0040 21 8 4.8524 -12.5733 7.4765 22 6 4.0992 -9.6267 6.3532 23 6 1.6844 -2.0596 1.3977 24 1 -0.3934 0.4417 0.7650 25 1 1.7923 -0.5138 -0.8899 26 1 3.5345 1.7703 0.0322 27 1 1.5615 2.4678 -1.2085 28 1 2.8302 1.0429 2.0586 29 1 3.6524 -0.1124 4.0706 30 1 3.2066 -2.5128 4.3823 31 1 1.9723 -4.1568 4.7598 32 1 3.4937 -4.5400 3.9191 33 1 2.4777 -6.6205 3.0305 34 1 0.9566 -6.2366 3.8714 35 1 1.8772 -8.6161 4.7394 36 1 1.4733 -9.8091 7.8932 37 1 1.6148 -10.4695 6.2064 38 1 2.7870 -12.6217 7.4554 39 1 3.5589 -12.1596 5.9196 40 1 4.9977 -13.5066 7.2692 41 1 4.1344 -10.0373 5.3441 42 1 5.0492 -9.1957 6.6691 43 1 1.1324 -2.6051 0.6467 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_4549614.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:07 Heat of formation + Delta-G solvation = -106.667639 kcal Electronic energy + Delta-G solvation = -24110.961105 eV Core-core repulsion = 20316.778835 eV Total energy + Delta-G solvation = -3794.182271 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.48136 -41.10752 -39.80048 -39.01336 -37.34500 -37.21032 -34.63435 -33.23618 -32.42156 -30.82024 -28.91822 -27.00554 -26.84880 -25.60102 -23.64484 -23.24869 -21.96759 -21.55672 -20.67456 -19.30499 -18.35818 -18.10380 -17.76382 -17.48181 -17.36122 -17.08694 -16.83266 -16.43610 -16.20464 -15.97531 -15.44638 -15.39401 -15.07359 -14.84501 -14.44063 -14.31304 -14.16245 -14.06944 -13.63689 -13.40857 -13.24353 -12.92217 -12.82179 -12.78911 -12.40044 -12.31296 -11.94651 -11.84564 -11.79738 -11.59274 -11.58047 -11.00745 -10.90840 -10.45556 -10.13640 -9.88640 -9.20431 -5.00668 0.25686 0.44880 1.29626 1.48790 1.66280 1.69429 1.99520 2.45590 2.71947 3.05649 3.32969 3.47750 3.49462 3.52885 3.67041 3.68644 3.81764 3.84148 3.89203 3.92755 4.08311 4.23528 4.26503 4.28706 4.33222 4.35561 4.45944 4.52000 4.52687 4.57866 4.61115 4.62868 4.71016 4.72596 4.90905 4.96689 5.01259 5.18201 5.30617 5.41846 5.44169 5.48204 5.72405 6.32273 6.40969 6.58597 6.60224 7.07219 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.691 3.309 4 C -0.083 4.083 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.317 6.317 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.521 3.479 13 O -0.538 6.538 14 N -0.719 5.719 15 C 0.121 3.879 16 H 0.118 0.882 17 C -0.138 4.138 18 C -0.109 4.109 19 H 0.103 0.897 20 C 0.087 3.913 21 O -0.573 6.573 22 C -0.144 4.144 23 C -0.126 4.126 24 H 0.379 0.621 25 H 0.115 0.885 26 H -0.258 1.258 27 H -0.255 1.255 28 H 0.129 0.871 29 H 0.131 0.869 30 H 0.133 0.867 31 H 0.073 0.927 32 H 0.072 0.928 33 H 0.107 0.893 34 H 0.108 0.892 35 H 0.403 0.597 36 H 0.081 0.919 37 H 0.089 0.911 38 H 0.048 0.952 39 H 0.047 0.953 40 H 0.381 0.619 41 H 0.085 0.915 42 H 0.075 0.925 43 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.441 -2.960 1.091 3.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.593 3.407 4 C -0.083 4.083 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.308 3.692 13 O -0.414 6.414 14 N -0.370 5.370 15 C 0.017 3.983 16 H 0.136 0.864 17 C -0.176 4.176 18 C -0.128 4.128 19 H 0.121 0.879 20 C 0.009 3.991 21 O -0.379 6.379 22 C -0.183 4.183 23 C -0.144 4.144 24 H 0.227 0.773 25 H 0.132 0.868 26 H -0.182 1.182 27 H -0.180 1.180 28 H 0.146 0.854 29 H 0.149 0.851 30 H 0.150 0.850 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.125 0.875 34 H 0.126 0.874 35 H 0.238 0.762 36 H 0.099 0.901 37 H 0.107 0.893 38 H 0.066 0.934 39 H 0.065 0.935 40 H 0.228 0.772 41 H 0.104 0.896 42 H 0.094 0.906 43 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -1.471 -1.704 0.787 2.385 hybrid contribution -0.079 -1.612 -0.460 1.678 sum -1.551 -3.316 0.327 3.676 Atomic orbital electron populations 1.86511 1.16945 1.81737 1.49217 1.25106 0.85343 1.10232 0.97309 0.94644 0.81115 0.77896 0.87086 1.20127 0.97998 0.93701 0.96485 1.20906 1.01618 0.99461 0.95179 1.20936 0.97487 0.93714 0.96972 1.21400 1.04201 0.95988 1.00500 1.18963 0.95165 0.82654 0.94504 1.85974 1.74475 1.20298 1.42289 1.22419 0.99697 0.91826 0.86174 1.21479 1.04285 0.95095 0.97352 1.20334 0.79319 0.82152 0.87423 1.90752 1.40726 1.62502 1.47447 1.45949 1.57714 1.09584 1.23721 1.22551 0.94520 0.93261 0.88011 0.86372 1.23364 0.96530 0.95507 1.02241 1.22344 0.96560 0.93051 1.00861 0.87886 1.22143 0.85872 0.93724 0.97366 1.86499 1.38511 1.30849 1.82031 1.23528 0.98744 0.96506 0.99499 1.20244 1.03247 0.93716 0.97222 0.77318 0.86811 1.18240 1.17975 0.85417 0.85120 0.84957 0.90868 0.90931 0.87477 0.87401 0.76191 0.90057 0.89256 0.93363 0.93506 0.77176 0.89620 0.90584 0.84887 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.43 12.83 -35.23 -0.45 -0.88 16 2 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.69 -0.45 29.80 -169.99 -5.07 -5.51 16 4 C -0.08 -0.09 5.35 -104.64 -0.56 -0.65 16 5 C -0.15 -0.04 8.67 -39.56 -0.34 -0.38 16 6 C -0.07 -0.03 10.04 -39.60 -0.40 -0.43 16 7 C -0.20 -0.30 9.04 -39.43 -0.36 -0.65 16 8 C 0.13 0.32 6.69 -39.21 -0.26 0.06 16 9 O -0.32 -0.67 10.14 -19.41 -0.20 -0.86 16 10 C 0.07 0.04 4.03 37.16 0.15 0.19 16 11 C -0.14 0.24 6.07 -27.88 -0.17 0.07 16 12 C 0.52 0.21 7.83 -10.99 -0.09 0.13 16 13 O -0.54 -2.41 15.58 5.55 0.09 -2.33 16 14 N -0.72 1.32 5.35 -53.01 -0.28 1.04 16 15 C 0.12 -0.12 4.24 -67.12 -0.28 -0.41 16 16 H 0.12 0.10 7.47 -51.93 -0.39 -0.29 16 17 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 18 C -0.11 0.13 4.01 -89.81 -0.36 -0.23 16 19 H 0.10 -0.02 8.14 -51.93 -0.42 -0.45 16 20 C 0.09 -0.13 6.88 37.16 0.26 0.13 16 21 O -0.57 -0.20 13.66 -35.23 -0.48 -0.69 16 22 C -0.14 0.10 7.43 -25.92 -0.19 -0.09 16 23 C -0.13 -0.28 9.62 -39.43 -0.38 -0.66 16 24 H 0.38 -1.17 8.70 45.56 0.40 -0.77 16 25 H 0.11 0.09 7.96 -51.93 -0.41 -0.33 16 26 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 27 H -0.25 -0.64 7.11 56.52 0.40 -0.23 16 28 H 0.13 -0.23 4.90 -52.49 -0.26 -0.49 16 29 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 30 H 0.13 0.07 6.30 -52.49 -0.33 -0.26 16 31 H 0.07 0.06 7.61 -51.93 -0.40 -0.34 16 32 H 0.07 0.07 7.63 -51.93 -0.40 -0.33 16 33 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 34 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 35 H 0.40 -1.87 8.73 -40.82 -0.36 -2.22 16 36 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.09 -0.36 8.08 -51.93 -0.42 -0.78 16 38 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.05 -0.12 7.84 -51.93 -0.41 -0.52 16 40 H 0.38 -1.46 9.12 45.56 0.42 -1.04 16 41 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 42 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 43 H 0.13 0.29 8.06 -52.49 -0.42 -0.14 16 LS Contribution 358.87 15.07 5.41 5.41 Total: 0.00 -9.37 358.87 -9.60 -18.97 By element: Atomic # 1 Polarization: -6.92 SS G_CDS: -5.54 Total: -12.46 kcal Atomic # 6 Polarization: 0.39 SS G_CDS: -3.08 Total: -2.68 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -0.28 Total: 1.04 kcal Atomic # 8 Polarization: -3.71 SS G_CDS: -1.04 Total: -4.76 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.07 Total: -5.51 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -9.37 -9.60 -18.97 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4549614.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.698 kcal (2) G-P(sol) polarization free energy of solvation -9.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.065 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.969 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.668 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds