Wall clock time and date at job start Tue Mar 9 2021 13:07:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36547 * 126.64705 * 2 1 4 4 C 1.46657 * 125.98763 * 0.02562 * 3 2 1 5 5 O 1.21690 * 119.99773 * 359.97438 * 4 3 2 6 6 N 1.34779 * 119.99503 * 179.97438 * 4 3 2 7 7 C 1.46501 * 119.99260 * 179.97438 * 6 4 3 8 8 H 1.09003 * 112.85491 * 25.34098 * 7 6 4 9 9 C 1.53789 * 113.60887 * 156.52997 * 7 6 4 10 10 C 1.53787 * 87.07655 * 139.98339 * 9 7 6 11 11 H 1.08995 * 113.61326 * 89.11893 * 10 9 7 12 12 C 1.53002 * 113.61156 * 219.93269 * 10 9 7 13 13 O 1.42900 * 109.47175 * 184.99988 * 12 10 9 14 14 C 1.53780 * 113.61831 * 254.13718 * 7 6 4 15 15 O 1.34920 * 108.02073 * 179.76416 * 3 2 1 16 16 C 1.33932 * 109.38345 * 0.42899 * 15 3 2 17 17 C 1.50699 * 125.61038 * 179.82473 * 16 15 3 18 18 O 1.42897 * 109.47708 * 269.69569 * 17 16 15 19 19 C 1.35895 * 117.00208 * 180.02562 * 18 17 16 20 20 C 1.38735 * 120.05238 * 180.02562 * 19 18 17 21 21 C 1.38147 * 119.94145 * 180.02562 * 20 19 18 22 22 C 1.38267 * 120.05771 * 0.02731 * 21 20 19 23 23 C 1.50699 * 119.94534 * 179.97438 * 22 21 20 24 24 O 1.42895 * 109.47158 * 299.99634 * 23 22 21 25 25 Si 1.86300 * 109.46944 * 180.02562 * 23 22 21 26 26 C 1.38271 * 120.10847 * 0.24836 * 22 21 20 27 27 C 1.38146 * 120.05540 * 359.45178 * 26 22 21 28 28 C 1.35126 * 108.76636 * 359.57167 * 16 15 3 29 29 H 1.09001 * 109.46798 * 270.00010 * 1 2 3 30 30 H 1.09004 * 109.47133 * 29.99422 * 1 2 3 31 31 H 1.08995 * 109.47717 * 149.99400 * 1 2 3 32 32 H 0.96989 * 120.00318 * 0.02562 * 6 4 3 33 33 H 1.09000 * 113.61622 * 254.53171 * 9 7 6 34 34 H 1.08999 * 113.61528 * 25.43632 * 9 7 6 35 35 H 1.08997 * 109.47530 * 305.00336 * 12 10 9 36 36 H 1.08998 * 109.46807 * 65.00121 * 12 10 9 37 37 H 0.96690 * 114.00147 * 180.02562 * 13 12 10 38 38 H 1.08996 * 113.61062 * 334.57436 * 14 7 6 39 39 H 1.08998 * 113.61192 * 105.47400 * 14 7 6 40 40 H 1.09001 * 109.46586 * 149.69847 * 17 16 15 41 41 H 1.08995 * 109.47495 * 29.70221 * 17 16 15 42 42 H 1.07993 * 120.03312 * 0.02562 * 20 19 18 43 43 H 1.07997 * 119.97419 * 179.97438 * 21 20 19 44 44 H 1.09000 * 109.47247 * 60.00087 * 23 22 21 45 45 H 0.96698 * 114.00355 * 300.00487 * 24 23 22 46 46 H 1.48506 * 110.00048 * 180.02562 * 25 23 22 47 47 H 1.48502 * 109.99996 * 301.31619 * 25 23 22 48 48 H 1.08003 * 119.96765 * 179.70258 * 26 22 21 49 49 H 1.08003 * 120.02761 * 180.25084 * 27 26 22 50 50 H 1.08000 * 126.43766 * 180.24188 * 28 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3220 1.0956 0.0000 4 6 1.8843 2.4953 0.0005 5 8 0.6968 2.7614 0.0006 6 7 2.7973 3.4868 0.0010 7 6 2.3599 4.8850 0.0010 8 1 1.3670 5.0180 0.4305 9 6 3.4095 5.8586 0.5627 10 6 2.9977 6.8261 -0.5595 11 1 2.1788 7.4907 -0.2843 12 6 4.1768 7.5671 -1.1932 13 8 3.6876 8.5215 -2.1376 14 6 2.5441 5.5881 -1.3542 15 8 3.6005 0.6646 0.0053 16 6 3.6183 -0.6746 -0.0008 17 6 4.8549 -1.5357 -0.0015 18 8 5.2454 -1.8077 -1.3490 19 6 6.3506 -2.5780 -1.5275 20 6 6.7866 -2.8810 -2.8093 21 6 7.9101 -3.6647 -2.9882 22 6 8.5996 -4.1474 -1.8912 23 6 9.8245 -5.0026 -2.0893 24 8 9.4714 -6.1783 -2.8207 25 14 10.5172 -5.4891 -0.4297 26 6 8.1638 -3.8515 -0.6128 27 6 7.0444 -3.0631 -0.4285 28 6 2.3447 -1.1262 -0.0006 29 1 -0.3633 0.0000 1.0277 30 1 -0.3633 0.8901 -0.5138 31 1 -0.3634 -0.8899 -0.5139 32 1 3.7436 3.2746 0.0006 33 1 3.1751 6.2242 1.5624 34 1 4.4336 5.4962 0.4728 35 1 4.7425 8.0816 -0.4165 36 1 4.8243 6.8524 -1.7011 37 1 4.3819 9.0290 -2.5795 38 1 3.3311 5.1516 -1.9691 39 1 1.6121 5.7356 -1.8998 40 1 4.6446 -2.4738 0.5121 41 1 5.6619 -1.0133 0.5122 42 1 6.2482 -2.5046 -3.6664 43 1 8.2497 -3.9013 -3.9857 44 1 10.5743 -4.4401 -2.6456 45 1 8.8069 -6.7285 -2.3840 46 1 11.7260 -6.3324 -0.6112 47 1 10.8586 -4.2748 0.3539 48 1 8.7013 -4.2338 0.2424 49 1 6.7068 -2.8289 0.5703 50 1 2.0305 -2.1595 -0.0011 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_4549632.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:16 Heat of formation + Delta-G solvation = -82.416507 kcal Electronic energy + Delta-G solvation = -32584.376594 eV Core-core repulsion = 27932.347699 eV Total energy + Delta-G solvation = -4652.028895 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.89509 -41.38908 -41.14037 -39.56091 -39.27393 -37.31356 -37.24101 -35.40897 -34.43810 -33.21612 -32.12645 -31.56599 -29.33309 -28.82990 -27.87380 -26.82441 -26.27011 -24.43709 -23.72903 -22.71901 -22.32056 -22.03464 -21.20785 -20.48921 -19.56856 -19.14254 -18.38805 -18.27313 -17.54638 -17.46621 -17.40044 -17.01667 -16.69986 -16.46409 -16.15798 -16.01466 -15.79415 -15.72984 -15.40395 -15.22148 -14.80548 -14.73349 -14.48348 -14.33642 -14.22396 -14.03133 -13.79642 -13.70491 -13.62595 -13.60574 -13.42757 -13.40409 -12.83580 -12.72501 -12.34616 -12.24230 -12.19232 -12.10029 -11.83004 -11.78233 -11.55415 -11.12519 -10.90454 -10.76811 -10.47232 -10.19880 -10.12010 -9.65360 -9.29662 -5.09554 -0.18733 0.21353 0.22802 0.99521 1.25234 1.37812 1.57077 1.92734 2.00580 2.08825 2.31049 2.58937 3.07731 3.24003 3.35154 3.42738 3.53460 3.58339 3.61722 3.65563 3.70590 3.72258 3.80769 3.86536 3.90919 3.93520 4.20140 4.29616 4.31746 4.34812 4.36766 4.45385 4.46164 4.48567 4.55112 4.58807 4.62399 4.65100 4.73645 4.79767 4.87642 4.92153 4.98426 5.00267 5.07802 5.09647 5.17575 5.18828 5.37208 5.43363 5.47683 5.61052 5.72957 6.18999 6.36576 6.54177 6.63089 7.00556 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C -0.083 4.083 3 C -0.075 4.075 4 C 0.607 3.393 5 O -0.511 6.511 6 N -0.711 5.711 7 C 0.122 3.878 8 H 0.121 0.879 9 C -0.138 4.138 10 C -0.108 4.108 11 H 0.104 0.896 12 C 0.087 3.913 13 O -0.573 6.573 14 C -0.144 4.144 15 O -0.157 6.157 16 C 0.010 3.990 17 C 0.140 3.860 18 O -0.308 6.308 19 C 0.135 3.865 20 C -0.147 4.147 21 C -0.051 4.051 22 C -0.156 4.156 23 C -0.064 4.064 24 O -0.541 6.541 25 Si 0.687 3.313 26 C -0.075 4.075 27 C -0.205 4.205 28 C -0.182 4.182 29 H 0.077 0.923 30 H 0.088 0.912 31 H 0.071 0.929 32 H 0.406 0.594 33 H 0.082 0.918 34 H 0.089 0.911 35 H 0.048 0.952 36 H 0.047 0.953 37 H 0.381 0.619 38 H 0.086 0.914 39 H 0.078 0.922 40 H 0.103 0.897 41 H 0.086 0.914 42 H 0.134 0.866 43 H 0.135 0.865 44 H 0.113 0.887 45 H 0.379 0.621 46 H -0.255 1.255 47 H -0.259 1.259 48 H 0.130 0.870 49 H 0.133 0.867 50 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.569 -1.596 3.329 4.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.086 4.086 3 C -0.127 4.127 4 C 0.393 3.607 5 O -0.388 6.388 6 N -0.361 5.361 7 C 0.017 3.983 8 H 0.139 0.861 9 C -0.176 4.176 10 C -0.127 4.127 11 H 0.122 0.878 12 C 0.009 3.991 13 O -0.379 6.379 14 C -0.182 4.182 15 O -0.053 6.053 16 C -0.042 4.042 17 C 0.065 3.935 18 O -0.222 6.222 19 C 0.090 3.910 20 C -0.165 4.165 21 C -0.069 4.069 22 C -0.157 4.157 23 C -0.175 4.175 24 O -0.346 6.346 25 Si 0.589 3.411 26 C -0.093 4.093 27 C -0.223 4.223 28 C -0.201 4.201 29 H 0.096 0.904 30 H 0.107 0.893 31 H 0.090 0.910 32 H 0.241 0.759 33 H 0.101 0.899 34 H 0.108 0.892 35 H 0.066 0.934 36 H 0.065 0.935 37 H 0.228 0.772 38 H 0.104 0.896 39 H 0.096 0.904 40 H 0.121 0.879 41 H 0.104 0.896 42 H 0.152 0.848 43 H 0.152 0.848 44 H 0.130 0.870 45 H 0.226 0.774 46 H -0.180 1.180 47 H -0.184 1.184 48 H 0.147 0.853 49 H 0.151 0.849 50 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 2.391 -1.066 3.530 4.395 hybrid contribution 1.095 0.403 -0.432 1.244 sum 3.485 -0.663 3.099 4.710 Atomic orbital electron populations 1.20480 0.87646 1.04038 1.03244 1.20694 0.97965 0.90676 0.99236 1.21894 0.81156 0.94881 1.14774 1.16516 0.85834 0.81754 0.76585 1.90878 1.15595 1.82178 1.50184 1.45895 1.09796 1.05878 1.74501 1.22619 0.99908 0.78126 0.97613 0.86120 1.23361 0.99442 0.95634 0.99153 1.22369 0.98844 0.95228 0.96294 0.87802 1.22137 0.95044 0.90805 0.91119 1.86493 1.38048 1.54712 1.58602 1.23563 1.02763 0.95204 0.96718 1.83969 1.28546 1.21790 1.70986 1.21891 0.95955 0.80636 1.05677 1.20942 0.92045 0.97157 0.83356 1.86154 1.42086 1.66187 1.27771 1.18988 0.86317 0.91383 0.94341 1.20532 0.98731 1.02313 0.94950 1.20858 0.93032 0.93882 0.99160 1.20268 0.99403 1.02556 0.93425 1.24976 0.97300 0.87422 1.07757 1.86502 1.63684 1.34692 1.49748 0.94804 0.84459 0.83974 0.77879 1.20805 0.95511 0.96781 0.96196 1.21191 0.98979 1.03986 0.98169 1.21609 0.91112 1.00631 1.06769 0.90418 0.89304 0.91036 0.75911 0.89906 0.89246 0.93352 0.93501 0.77191 0.89579 0.90367 0.87937 0.89617 0.84771 0.84754 0.86959 0.77362 1.17968 1.18379 0.85262 0.84928 0.82035 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.13 9.82 36.00 0.35 0.23 16 2 C -0.08 -0.18 6.20 -104.44 -0.65 -0.83 16 3 C -0.07 -0.20 7.13 -36.80 -0.26 -0.46 16 4 C 0.61 1.85 7.79 -12.86 -0.10 1.75 16 5 O -0.51 -2.86 14.35 5.20 0.07 -2.78 16 6 N -0.71 -0.27 5.36 -54.32 -0.29 -0.56 16 7 C 0.12 -0.01 4.21 -67.11 -0.28 -0.30 16 8 H 0.12 0.13 7.50 -51.93 -0.39 -0.26 16 9 C -0.14 0.28 7.39 -25.91 -0.19 0.09 16 10 C -0.11 0.08 4.01 -89.71 -0.36 -0.28 16 11 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 12 C 0.09 -0.08 6.89 37.16 0.26 0.17 16 13 O -0.57 -0.43 13.66 -35.23 -0.48 -0.91 16 14 C -0.14 -0.01 7.45 -25.83 -0.19 -0.20 16 15 O -0.16 -0.27 10.40 4.98 0.05 -0.22 16 16 C 0.01 0.01 6.94 -35.42 -0.25 -0.24 16 17 C 0.14 -0.23 5.27 36.01 0.19 -0.04 16 18 O -0.31 -0.26 10.12 -19.41 -0.20 -0.46 16 19 C 0.13 0.05 6.69 -39.22 -0.26 -0.21 16 20 C -0.15 -0.08 9.99 -39.43 -0.39 -0.47 16 21 C -0.05 0.00 9.60 -39.60 -0.38 -0.39 16 22 C -0.16 0.07 5.39 -104.60 -0.56 -0.50 16 23 C -0.06 0.05 2.82 36.01 0.10 0.15 16 24 O -0.54 0.11 12.76 -35.23 -0.45 -0.34 16 25 Si 0.69 -1.08 29.78 -169.99 -5.06 -6.14 16 26 C -0.08 0.09 8.66 -39.60 -0.34 -0.25 16 27 C -0.20 0.24 9.04 -39.43 -0.36 -0.12 16 28 C -0.18 -0.11 10.72 -39.89 -0.43 -0.54 16 29 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.09 0.26 6.44 -51.93 -0.33 -0.08 16 31 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.41 -0.58 8.47 -40.82 -0.35 -0.92 16 33 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.09 -0.28 8.07 -51.93 -0.42 -0.70 16 35 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 36 H 0.05 -0.08 7.86 -51.93 -0.41 -0.49 16 37 H 0.38 -1.31 9.12 45.56 0.42 -0.89 16 38 H 0.09 -0.01 7.91 -51.93 -0.41 -0.42 16 39 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 40 H 0.10 -0.42 7.66 -51.93 -0.40 -0.82 16 41 H 0.09 -0.26 7.67 -51.93 -0.40 -0.66 16 42 H 0.13 -0.02 8.06 -52.49 -0.42 -0.44 16 43 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 44 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 45 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 46 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 47 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 48 H 0.13 -0.40 4.87 -52.48 -0.26 -0.66 16 49 H 0.13 -0.47 6.30 -52.48 -0.33 -0.80 16 50 H 0.16 -0.27 8.06 -52.49 -0.42 -0.69 16 LS Contribution 418.20 15.07 6.30 6.30 Total: 0.00 -9.53 418.20 -10.46 -19.98 By element: Atomic # 1 Polarization: -6.15 SS G_CDS: -6.29 Total: -12.44 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -4.11 Total: -2.44 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -0.29 Total: -0.56 kcal Atomic # 8 Polarization: -3.70 SS G_CDS: -1.00 Total: -4.71 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.06 Total: -6.14 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -9.53 -10.46 -19.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4549632.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.432 kcal (2) G-P(sol) polarization free energy of solvation -9.530 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.961 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.985 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds