Wall clock time and date at job start Tue Mar 9 2021 13:07:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35994 * 116.99903 * 2 1 4 4 C 1.39155 * 120.06774 * 179.97438 * 3 2 1 5 5 O 1.35996 * 120.07763 * 359.95670 * 4 3 2 6 6 C 1.42899 * 117.00323 * 179.97438 * 5 4 3 7 7 C 1.50700 * 109.47143 * 179.97438 * 6 5 4 8 8 O 1.21283 * 119.99803 * 359.97438 * 7 6 5 9 9 N 1.34777 * 119.99675 * 180.27800 * 7 6 5 10 10 C 1.46497 * 119.99525 * 179.72583 * 9 7 6 11 11 H 1.08999 * 112.85394 * 25.33225 * 10 9 7 12 12 C 1.53787 * 113.61411 * 156.52516 * 10 9 7 13 13 C 1.53781 * 87.08089 * 139.97909 * 12 10 9 14 14 H 1.09001 * 113.61092 * 89.20036 * 13 12 10 15 15 C 1.52998 * 113.61673 * 220.01938 * 13 12 10 16 16 O 1.42894 * 109.47218 * 185.00118 * 15 13 12 17 17 C 1.53782 * 113.61561 * 254.13328 * 10 9 7 18 18 C 1.38571 * 119.85169 * 180.23057 * 4 3 2 19 19 C 1.38244 * 119.99477 * 359.48891 * 18 4 3 20 20 N 1.48008 * 119.92327 * 180.25430 * 19 18 4 21 21 O 1.21801 * 119.99765 * 0.25697 * 20 19 18 22 22 O 1.21795 * 120.00033 * 180.25650 * 20 19 18 23 23 C 1.38247 * 120.15034 * 0.51735 * 19 18 4 24 24 C 1.50694 * 119.92805 * 179.76413 * 23 19 18 25 25 O 1.42909 * 109.47313 * 74.97400 * 24 23 19 26 26 Si 1.86301 * 109.47208 * 194.97301 * 24 23 19 27 27 C 1.38249 * 120.14401 * 359.73796 * 23 19 18 28 28 H 1.09000 * 109.47340 * 300.00509 * 1 2 3 29 29 H 1.09000 * 109.46890 * 59.99947 * 1 2 3 30 30 H 1.08998 * 109.47627 * 180.02562 * 1 2 3 31 31 H 1.09009 * 109.46798 * 59.99577 * 6 5 4 32 32 H 1.08998 * 109.46844 * 300.00081 * 6 5 4 33 33 H 0.97000 * 119.99894 * 359.71837 * 9 7 6 34 34 H 1.08993 * 113.61473 * 254.53188 * 12 10 9 35 35 H 1.09003 * 113.61107 * 25.35156 * 12 10 9 36 36 H 1.09000 * 109.47376 * 305.00397 * 15 13 12 37 37 H 1.08998 * 109.47061 * 64.99828 * 15 13 12 38 38 H 0.96703 * 113.99467 * 180.02562 * 16 15 13 39 39 H 1.08998 * 113.61082 * 334.56688 * 17 10 9 40 40 H 1.08997 * 113.61349 * 105.47095 * 17 10 9 41 41 H 1.07994 * 119.99737 * 179.72422 * 18 4 3 42 42 H 1.08999 * 109.47053 * 314.97250 * 24 23 19 43 43 H 0.96701 * 113.99664 * 60.00225 * 25 24 23 44 44 H 1.48497 * 109.99736 * 58.67954 * 26 24 23 45 45 H 1.48500 * 109.99796 * 179.97438 * 26 24 23 46 46 H 1.08001 * 119.99547 * 179.97438 * 27 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2862 0.0005 5 8 4.1796 0.1476 0.0020 6 6 5.6003 0.3005 0.0019 7 6 6.2518 -1.0584 0.0042 8 8 5.5668 -2.0593 0.0062 9 7 7.5957 -1.1614 0.0102 10 6 8.2289 -2.4824 0.0185 11 1 7.5951 -3.2584 -0.4106 12 6 9.6630 -2.4816 -0.5369 13 6 10.0164 -3.4654 0.5909 14 1 9.8729 -4.5111 0.3190 15 6 11.3804 -3.1997 1.2310 16 8 11.6692 -4.2275 2.1808 17 6 8.8370 -2.8655 1.3780 18 6 4.0604 2.5233 0.0054 19 6 3.3030 3.6798 -0.0010 20 7 3.9716 5.0002 -0.0015 21 8 5.1878 5.0670 -0.0011 22 8 3.3057 6.0200 -0.0025 23 6 1.9225 3.6057 -0.0015 24 6 1.1018 4.8696 -0.0031 25 8 1.1358 5.4580 -1.3050 26 14 -0.6597 4.4668 0.4505 27 6 1.2933 2.3747 -0.0010 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 5.9065 0.8514 0.8913 32 1 5.9066 0.8492 -0.8888 33 1 8.1434 -0.3609 0.0088 34 1 9.7451 -2.9131 -1.5344 35 1 10.1642 -1.5175 -0.4502 36 1 12.1492 -3.1927 0.4583 37 1 11.3632 -2.2335 1.7351 38 1 12.5208 -4.1227 2.6269 39 1 9.1126 -2.0070 1.9905 40 1 8.2533 -3.6065 1.9241 41 1 5.1386 2.5838 0.0103 42 1 1.5128 5.5706 0.7233 43 1 0.7844 4.8887 -2.0032 44 1 -0.7054 3.8252 1.7889 45 1 -1.4793 5.7051 0.4530 46 1 0.2147 2.3197 -0.0009 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_4549636.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:23 Heat of formation + Delta-G solvation = -117.305563 kcal Electronic energy + Delta-G solvation = -33570.091376 eV Core-core repulsion = 28625.749182 eV Total energy + Delta-G solvation = -4944.342193 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.144 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.24743 -42.13162 -41.36771 -40.25551 -39.40431 -39.10377 -37.57889 -37.31155 -37.07452 -34.71381 -32.71644 -32.58234 -30.32763 -29.08383 -28.47611 -27.86976 -26.87701 -25.84550 -24.22484 -23.42557 -23.07394 -21.79185 -20.82337 -20.72160 -19.69781 -19.57091 -18.74120 -18.51996 -18.44073 -18.25974 -17.83773 -17.71630 -17.53763 -17.17956 -17.01824 -16.51378 -16.43166 -16.14150 -15.83666 -15.79053 -15.27350 -15.23465 -14.98172 -14.52504 -14.41281 -14.10182 -13.95909 -13.65957 -13.54076 -13.45743 -13.14714 -12.81916 -12.73546 -12.58685 -12.53386 -12.39405 -12.28828 -12.20892 -11.95361 -11.87303 -11.68079 -11.59780 -11.02143 -10.92197 -10.59207 -10.53800 -10.21291 -9.54310 -5.28058 -1.23477 -0.52036 0.31057 0.42288 1.02289 1.13645 1.35909 1.43679 1.70764 1.82108 1.85700 2.23453 2.89658 3.02525 3.08178 3.19007 3.27384 3.33646 3.42283 3.44658 3.51441 3.62361 3.63862 3.73157 3.79163 3.84691 3.87373 3.93953 3.96676 4.15420 4.23991 4.25605 4.31195 4.37925 4.44862 4.49788 4.53451 4.60693 4.65550 4.67350 4.87039 4.95581 5.12596 5.35551 5.45373 5.46783 5.91358 6.23460 6.43246 6.59964 6.77381 6.98223 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.171 3.829 4 C 0.109 3.891 5 O -0.264 6.264 6 C 0.031 3.969 7 C 0.519 3.481 8 O -0.508 6.508 9 N -0.716 5.716 10 C 0.124 3.876 11 H 0.119 0.881 12 C -0.137 4.137 13 C -0.109 4.109 14 H 0.103 0.897 15 C 0.087 3.913 16 O -0.573 6.573 17 C -0.144 4.144 18 C -0.118 4.118 19 C -0.025 4.025 20 N 0.032 4.968 21 O -0.174 6.174 22 O -0.129 6.129 23 C -0.043 4.043 24 C -0.074 4.074 25 O -0.515 6.515 26 Si 0.675 3.325 27 C -0.177 4.177 28 H 0.064 0.936 29 H 0.068 0.932 30 H 0.114 0.886 31 H 0.099 0.901 32 H 0.100 0.900 33 H 0.404 0.596 34 H 0.082 0.918 35 H 0.090 0.910 36 H 0.048 0.952 37 H 0.047 0.953 38 H 0.381 0.619 39 H 0.086 0.914 40 H 0.077 0.923 41 H 0.166 0.834 42 H 0.139 0.861 43 H 0.374 0.626 44 H -0.252 1.252 45 H -0.242 1.242 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.284 -2.292 -1.576 2.796 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.048 4.048 7 C 0.303 3.697 8 O -0.381 6.381 9 N -0.370 5.370 10 C 0.020 3.980 11 H 0.137 0.863 12 C -0.176 4.176 13 C -0.128 4.128 14 H 0.122 0.878 15 C 0.009 3.991 16 O -0.379 6.379 17 C -0.183 4.183 18 C -0.138 4.138 19 C -0.109 4.109 20 N 0.551 4.449 21 O -0.385 6.385 22 O -0.350 6.350 23 C -0.045 4.045 24 C -0.184 4.184 25 O -0.319 6.319 26 Si 0.575 3.425 27 C -0.196 4.196 28 H 0.083 0.917 29 H 0.086 0.914 30 H 0.132 0.868 31 H 0.117 0.883 32 H 0.118 0.882 33 H 0.238 0.762 34 H 0.101 0.899 35 H 0.108 0.892 36 H 0.067 0.933 37 H 0.065 0.935 38 H 0.228 0.772 39 H 0.104 0.896 40 H 0.095 0.905 41 H 0.184 0.816 42 H 0.156 0.844 43 H 0.220 0.780 44 H -0.176 1.176 45 H -0.166 1.166 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.499 -3.683 -0.876 4.072 hybrid contribution 1.694 1.449 0.399 2.265 sum 0.196 -2.234 -0.477 2.292 Atomic orbital electron populations 1.23420 0.76795 1.05789 1.02170 1.86348 1.22494 1.24209 1.86485 1.18448 0.89042 0.85905 0.94384 1.17858 0.88433 0.85336 1.02171 1.86339 1.16862 1.26014 1.88399 1.22680 0.80218 0.97295 1.04592 1.19881 0.82757 0.90124 0.76942 1.90808 1.62592 1.37845 1.46839 1.45808 1.05688 1.09619 1.75852 1.22582 0.92775 0.85130 0.97528 0.86290 1.23362 0.94846 1.00211 0.99148 1.22367 0.93671 1.00474 0.96258 0.87837 1.22137 0.95846 0.90094 0.91027 1.86496 1.42812 1.50505 1.58072 1.23567 0.96777 1.01210 0.96732 1.20802 1.02193 0.88973 1.01845 1.20397 0.91979 0.83129 1.15410 1.43382 1.00984 1.02624 0.97912 1.94540 0.95800 1.93725 1.54396 1.94575 1.64446 1.24073 1.51862 1.20097 0.91600 0.97054 0.95750 1.25469 1.08491 0.93257 0.91198 1.86714 1.86626 1.43405 1.15148 0.95571 0.76327 0.85228 0.85419 1.20900 1.00505 0.89591 1.08558 0.91743 0.91356 0.86767 0.88273 0.88184 0.76163 0.89938 0.89154 0.93335 0.93485 0.77152 0.89551 0.90461 0.81647 0.84414 0.77973 1.17648 1.16593 0.82013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.07 10.28 -34.22 -0.35 -0.42 16 3 C 0.17 -0.02 6.70 -39.12 -0.26 -0.28 16 4 C 0.11 0.06 6.70 -39.12 -0.26 -0.20 16 5 O -0.26 -0.45 9.45 -47.35 -0.45 -0.90 16 6 C 0.03 -0.05 5.22 36.01 0.19 0.13 16 7 C 0.52 0.36 7.91 -10.98 -0.09 0.27 16 8 O -0.51 -2.90 16.12 -14.36 -0.23 -3.13 16 9 N -0.72 1.60 5.36 -53.02 -0.28 1.32 16 10 C 0.12 -0.16 4.21 -67.12 -0.28 -0.44 16 11 H 0.12 0.07 7.50 -51.93 -0.39 -0.32 16 12 C -0.14 0.43 7.39 -25.92 -0.19 0.24 16 13 C -0.11 0.16 4.01 -89.72 -0.36 -0.20 16 14 H 0.10 -0.05 8.14 -51.93 -0.42 -0.47 16 15 C 0.09 -0.15 6.89 37.16 0.26 0.11 16 16 O -0.57 -0.12 13.66 -35.23 -0.48 -0.60 16 17 C -0.14 0.14 7.45 -25.83 -0.19 -0.05 16 18 C -0.12 0.01 8.54 -39.46 -0.34 -0.33 16 19 C -0.03 -0.04 6.85 -79.95 -0.55 -0.59 16 20 N 0.03 0.13 4.45 33.96 0.15 0.29 16 21 O -0.17 -0.84 18.44 -29.46 -0.54 -1.38 16 22 O -0.13 -0.70 14.62 -35.96 -0.53 -1.23 16 23 C -0.04 0.01 5.26 -104.62 -0.55 -0.54 16 24 C -0.07 0.01 1.74 36.00 0.06 0.07 16 25 O -0.52 -0.18 11.80 -55.47 -0.65 -0.83 16 26 Si 0.67 -1.47 29.91 -169.99 -5.08 -6.55 16 27 C -0.18 0.34 7.65 -39.46 -0.30 0.04 16 28 H 0.06 -0.34 7.66 -51.93 -0.40 -0.74 16 29 H 0.07 -0.42 7.66 -51.93 -0.40 -0.82 16 30 H 0.11 -0.58 8.14 -51.93 -0.42 -1.00 16 31 H 0.10 -0.42 7.65 -51.92 -0.40 -0.82 16 32 H 0.10 -0.44 7.68 -51.93 -0.40 -0.84 16 33 H 0.40 -2.19 8.71 -40.82 -0.36 -2.55 16 34 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 35 H 0.09 -0.41 8.07 -51.93 -0.42 -0.83 16 36 H 0.05 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.05 -0.13 7.85 -51.93 -0.41 -0.54 16 38 H 0.38 -1.50 9.12 45.56 0.42 -1.09 16 39 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 40 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.17 -0.34 5.85 -52.49 -0.31 -0.65 16 42 H 0.14 0.22 6.07 -51.93 -0.32 -0.09 16 43 H 0.37 -1.57 8.70 45.56 0.40 -1.18 16 44 H -0.25 0.04 7.11 56.52 0.40 0.44 16 45 H -0.24 -0.29 7.11 56.52 0.40 0.12 16 46 H 0.16 -0.81 3.36 -52.49 -0.18 -0.98 16 LS Contribution 389.12 15.07 5.86 5.86 Total: 0.00 -13.60 389.12 -9.34 -22.94 By element: Atomic # 1 Polarization: -9.65 SS G_CDS: -4.87 Total: -14.52 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: -1.88 Total: -0.84 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -0.13 Total: 1.60 kcal Atomic # 8 Polarization: -5.26 SS G_CDS: -3.24 Total: -8.49 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.08 Total: -6.55 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -13.60 -9.34 -22.94 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4549636.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.370 kcal (2) G-P(sol) polarization free energy of solvation -13.600 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.970 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.936 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds