Wall clock time and date at job start Tue Mar 9 2021 13:07:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35899 * 117.00090 * 2 1 4 4 C 1.38607 * 120.02786 * 179.97438 * 3 2 1 5 5 C 1.38655 * 119.89002 * 179.97438 * 4 3 2 6 6 O 1.35899 * 120.02723 * 179.72714 * 5 4 3 7 7 C 1.42902 * 117.00158 * 359.97438 * 6 5 4 8 8 C 1.50696 * 109.47375 * 180.02562 * 7 6 5 9 9 O 1.21280 * 119.99711 * 0.02562 * 8 7 6 10 10 N 1.34779 * 120.00206 * 179.97438 * 8 7 6 11 11 C 1.46494 * 119.99925 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85241 * 23.80619 * 11 10 8 13 13 C 1.53779 * 113.61325 * 155.00664 * 11 10 8 14 14 C 1.53775 * 87.08360 * 139.97873 * 13 11 10 15 15 H 1.09000 * 113.61796 * 89.11790 * 14 13 11 16 16 C 1.52998 * 113.61562 * 219.93227 * 14 13 11 17 17 O 1.42904 * 109.47343 * 185.00127 * 16 14 13 18 18 C 1.53777 * 87.08281 * 334.56647 * 14 13 11 19 19 C 1.38749 * 119.94596 * 359.97438 * 5 4 3 20 20 C 1.50705 * 119.97406 * 179.97438 * 19 5 4 21 21 O 1.42899 * 109.46620 * 75.00645 * 20 19 5 22 22 Si 1.86298 * 109.47260 * 195.00394 * 20 19 5 23 23 C 1.38194 * 120.05431 * 0.02719 * 19 5 4 24 24 C 1.38159 * 120.11019 * 359.95366 * 23 19 5 25 25 H 1.08997 * 109.47032 * 300.00038 * 1 2 3 26 26 H 1.09003 * 109.46829 * 60.00309 * 1 2 3 27 27 H 1.08997 * 109.46858 * 180.02562 * 1 2 3 28 28 H 1.08003 * 120.06004 * 0.02562 * 4 3 2 29 29 H 1.09003 * 109.46964 * 300.00788 * 7 6 5 30 30 H 1.08997 * 109.46893 * 60.00320 * 7 6 5 31 31 H 0.96999 * 119.99896 * 0.02562 * 10 8 7 32 32 H 1.09005 * 113.61591 * 254.52814 * 13 11 10 33 33 H 1.09001 * 113.61942 * 25.42881 * 13 11 10 34 34 H 1.09003 * 109.47297 * 305.00139 * 16 14 13 35 35 H 1.09002 * 109.47268 * 64.99853 * 16 14 13 36 36 H 0.96696 * 113.99738 * 180.02562 * 17 16 14 37 37 H 1.08994 * 113.61127 * 270.88538 * 18 14 13 38 38 H 1.08998 * 113.61874 * 139.98392 * 18 14 13 39 39 H 1.08998 * 109.47228 * 315.00583 * 20 19 5 40 40 H 0.96705 * 113.99765 * 180.02562 * 21 20 19 41 41 H 1.48502 * 110.00022 * 178.68345 * 22 20 19 42 42 H 1.48497 * 110.00028 * 300.00371 * 22 20 19 43 43 H 1.08000 * 119.94322 * 179.97438 * 23 19 5 44 44 H 1.08001 * 119.96976 * 180.02562 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2841 0.0005 5 6 4.0567 2.5210 0.0000 6 8 5.4136 2.5960 0.0061 7 6 6.1317 1.3605 0.0135 8 6 7.6124 1.6401 0.0202 9 8 8.0134 2.7847 0.0192 10 7 8.4912 0.6182 0.0283 11 6 9.9307 0.8901 0.0353 12 1 10.1739 1.8730 0.4390 13 6 10.7697 -0.2486 0.6389 14 6 11.7901 0.0154 -0.4808 15 1 12.5427 0.7593 -0.2193 16 6 12.3953 -1.2596 -1.0716 17 8 13.4099 -0.9120 -2.0160 18 6 10.6220 0.5838 -1.3038 19 6 3.2971 3.6821 -0.0016 20 6 3.9774 5.0269 -0.0016 21 8 4.5050 5.2936 -1.3026 22 14 2.7434 6.3471 0.4508 23 6 1.9173 3.6065 -0.0021 24 6 1.2906 2.3752 -0.0020 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3633 -1.0276 0.0005 28 1 4.0198 0.3792 0.0005 29 1 5.8657 0.7910 0.9041 30 1 5.8742 0.7854 -0.8758 31 1 8.1705 -0.2972 0.0294 32 1 11.1498 -0.0293 1.6367 33 1 10.2915 -1.2259 0.5724 34 1 12.8324 -1.8584 -0.2725 35 1 11.6154 -1.8343 -1.5712 36 1 13.8377 -1.6731 -2.4315 37 1 10.1035 -0.1659 -1.9014 38 1 10.8829 1.4751 -1.8745 39 1 4.7891 5.0235 0.7259 40 1 4.9582 6.1447 -1.3763 41 1 3.4091 7.6742 0.4854 42 1 1.6317 6.3620 -0.5336 43 1 1.3278 4.5114 -0.0030 44 1 0.2121 2.3187 -0.0028 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_4974312.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:41 Heat of formation + Delta-G solvation = -126.356893 kcal Electronic energy + Delta-G solvation = -27184.280981 eV Core-core repulsion = 23070.562729 eV Total energy + Delta-G solvation = -4113.718253 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.77364 -41.18394 -40.16301 -39.36224 -38.08701 -37.27620 -36.93915 -34.60200 -32.33112 -31.43204 -29.90284 -28.55937 -28.27979 -26.81867 -25.97458 -24.17388 -23.01155 -22.29489 -21.63406 -20.70881 -19.85889 -18.48580 -18.33199 -18.21391 -17.87375 -17.40310 -17.32783 -17.08641 -16.78700 -16.70473 -16.38820 -15.72306 -15.66564 -15.51159 -15.20780 -15.05528 -14.82948 -14.37410 -13.88907 -13.69245 -13.68924 -13.60839 -13.34628 -13.32122 -13.21038 -12.77650 -12.55440 -12.40609 -12.33826 -11.90645 -11.81163 -11.67291 -11.55375 -11.53990 -10.93573 -10.81076 -10.22624 -10.11214 -9.63680 -9.01809 -4.88308 0.27712 0.39332 1.40271 1.46052 1.50907 1.67009 2.02602 2.19360 2.57792 2.62047 3.07918 3.34320 3.49992 3.56087 3.58256 3.71708 3.73319 3.84041 3.91800 3.95663 4.00011 4.04288 4.11729 4.18190 4.29073 4.33433 4.35141 4.40901 4.42962 4.48279 4.54741 4.56035 4.65574 4.70652 4.72989 4.93108 5.00974 5.08062 5.19797 5.28440 5.36981 5.45911 5.51613 6.14970 6.33203 6.40995 6.62720 6.68543 7.12026 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.191 3.809 6 O -0.274 6.274 7 C 0.036 3.964 8 C 0.518 3.482 9 O -0.510 6.510 10 N -0.718 5.718 11 C 0.125 3.875 12 H 0.119 0.881 13 C -0.138 4.138 14 C -0.109 4.109 15 H 0.103 0.897 16 C 0.087 3.913 17 O -0.573 6.573 18 C -0.144 4.144 19 C -0.136 4.136 20 C -0.061 4.061 21 O -0.531 6.531 22 Si 0.683 3.317 23 C -0.037 4.037 24 C -0.239 4.239 25 H 0.060 0.940 26 H 0.058 0.942 27 H 0.102 0.898 28 H 0.138 0.862 29 H 0.097 0.903 30 H 0.096 0.904 31 H 0.402 0.598 32 H 0.081 0.919 33 H 0.089 0.911 34 H 0.048 0.952 35 H 0.047 0.953 36 H 0.381 0.619 37 H 0.086 0.914 38 H 0.076 0.924 39 H 0.076 0.924 40 H 0.377 0.623 41 H -0.261 1.261 42 H -0.256 1.256 43 H 0.138 0.862 44 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.147 -6.224 3.154 7.301 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.266 4.266 5 C 0.145 3.855 6 O -0.185 6.185 7 C -0.042 4.042 8 C 0.302 3.698 9 O -0.384 6.384 10 N -0.371 5.371 11 C 0.020 3.980 12 H 0.137 0.863 13 C -0.176 4.176 14 C -0.128 4.128 15 H 0.121 0.879 16 C 0.009 3.991 17 O -0.379 6.379 18 C -0.183 4.183 19 C -0.137 4.137 20 C -0.170 4.170 21 O -0.338 6.338 22 Si 0.585 3.415 23 C -0.055 4.055 24 C -0.258 4.258 25 H 0.078 0.922 26 H 0.077 0.923 27 H 0.121 0.879 28 H 0.156 0.844 29 H 0.114 0.886 30 H 0.113 0.887 31 H 0.237 0.763 32 H 0.100 0.900 33 H 0.108 0.892 34 H 0.066 0.934 35 H 0.065 0.935 36 H 0.228 0.772 37 H 0.104 0.896 38 H 0.095 0.905 39 H 0.094 0.906 40 H 0.224 0.776 41 H -0.186 1.186 42 H -0.181 1.181 43 H 0.155 0.845 44 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -2.504 -4.628 2.974 6.044 hybrid contribution 0.571 -0.960 -1.013 1.508 sum -1.933 -5.588 1.961 6.230 Atomic orbital electron populations 1.23144 0.77641 1.04366 1.01800 1.86069 1.21992 1.26672 1.88053 1.18671 0.91440 0.84369 0.92759 1.20352 0.92929 0.97222 1.16143 1.18385 0.81914 0.92470 0.92741 1.86236 1.14812 1.29636 1.87819 1.22530 0.90283 0.87182 1.04246 1.20048 0.87357 0.85732 0.76627 1.90781 1.79772 1.20896 1.46906 1.45805 1.06203 1.09042 1.76084 1.22549 0.77805 1.00325 0.97313 0.86297 1.23368 0.96295 0.98908 0.99018 1.22336 0.96064 0.97973 0.96421 0.87875 1.22142 0.90032 0.95717 0.91195 1.86500 1.54421 1.37277 1.59674 1.23536 0.95927 1.01990 0.96858 1.18467 0.92265 0.92093 1.10893 1.24567 1.03994 1.00327 0.88157 1.86607 1.75762 1.41659 1.29782 0.95302 0.79667 0.77240 0.89335 1.20722 0.92553 0.97885 0.94341 1.21102 1.00449 0.91673 1.12527 0.92159 0.92294 0.87923 0.84389 0.88554 0.88655 0.76293 0.90002 0.89231 0.93367 0.93507 0.77193 0.89585 0.90518 0.90594 0.77560 1.18640 1.18086 0.84452 0.84691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.43 10.49 -19.42 -0.20 -0.63 16 3 C 0.17 0.34 6.68 -39.24 -0.26 0.08 16 4 C -0.25 -0.48 8.97 -39.29 -0.35 -0.83 16 5 C 0.19 0.64 6.66 -39.24 -0.26 0.38 16 6 O -0.27 -1.09 8.99 -39.34 -0.35 -1.44 16 7 C 0.04 0.00 5.22 36.00 0.19 0.19 16 8 C 0.52 1.05 7.91 -10.99 -0.09 0.96 16 9 O -0.51 -3.53 16.10 -14.35 -0.23 -3.76 16 10 N -0.72 0.89 5.35 -53.02 -0.28 0.61 16 11 C 0.12 -0.06 4.24 -67.12 -0.28 -0.35 16 12 H 0.12 0.17 7.46 -51.93 -0.39 -0.22 16 13 C -0.14 0.35 7.39 -25.92 -0.19 0.16 16 14 C -0.11 0.10 4.01 -89.81 -0.36 -0.26 16 15 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 16 C 0.09 -0.11 6.89 37.16 0.26 0.14 16 17 O -0.57 -0.33 13.66 -35.23 -0.48 -0.81 16 18 C -0.14 0.04 7.43 -25.92 -0.19 -0.16 16 19 C -0.14 -0.44 5.31 -104.45 -0.55 -1.00 16 20 C -0.06 -0.17 2.37 36.01 0.09 -0.08 16 21 O -0.53 -2.31 12.86 -35.23 -0.45 -2.77 16 22 Si 0.68 0.38 30.19 -169.99 -5.13 -4.75 16 23 C -0.04 -0.06 8.65 -39.63 -0.34 -0.40 16 24 C -0.24 -0.25 9.04 -39.41 -0.36 -0.61 16 25 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 26 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 27 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 28 H 0.14 -0.04 6.30 -52.48 -0.33 -0.37 16 29 H 0.10 -0.26 7.67 -51.93 -0.40 -0.65 16 30 H 0.10 -0.18 7.65 -51.93 -0.40 -0.58 16 31 H 0.40 -1.82 8.73 -40.82 -0.36 -2.17 16 32 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 33 H 0.09 -0.36 8.08 -51.93 -0.42 -0.78 16 34 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.05 -0.11 7.85 -51.93 -0.41 -0.52 16 36 H 0.38 -1.39 9.12 45.56 0.42 -0.97 16 37 H 0.09 -0.08 7.90 -51.93 -0.41 -0.49 16 38 H 0.08 0.11 8.14 -51.93 -0.42 -0.32 16 39 H 0.08 0.20 7.82 -51.93 -0.41 -0.20 16 40 H 0.38 0.23 8.74 45.56 0.40 0.62 16 41 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 42 H -0.26 -0.70 6.75 56.52 0.38 -0.31 16 43 H 0.14 0.01 4.89 -52.49 -0.26 -0.25 16 44 H 0.14 -0.17 6.29 -52.49 -0.33 -0.50 16 LS Contribution 366.60 15.07 5.52 5.52 Total: 0.00 -11.63 366.60 -8.75 -20.38 By element: Atomic # 1 Polarization: -6.11 SS G_CDS: -5.41 Total: -11.53 kcal Atomic # 6 Polarization: 0.89 SS G_CDS: -1.72 Total: -0.83 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -0.28 Total: 0.61 kcal Atomic # 8 Polarization: -7.68 SS G_CDS: -1.72 Total: -9.41 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: -5.13 Total: -4.75 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -11.63 -8.75 -20.38 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4974312.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.974 kcal (2) G-P(sol) polarization free energy of solvation -11.631 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.605 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.752 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.383 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.357 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds