Wall clock time and date at job start Tue Mar 9 2021 13:07:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35899 * 117.00090 * 2 1 4 4 C 1.38607 * 120.02786 * 179.97438 * 3 2 1 5 5 C 1.38655 * 119.89002 * 179.97438 * 4 3 2 6 6 O 1.35899 * 120.02723 * 179.72714 * 5 4 3 7 7 C 1.42902 * 117.00158 * 359.97438 * 6 5 4 8 8 C 1.50696 * 109.47375 * 180.02562 * 7 6 5 9 9 O 1.21280 * 119.99711 * 0.02562 * 8 7 6 10 10 N 1.34779 * 120.00206 * 179.97438 * 8 7 6 11 11 C 1.46494 * 119.99925 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85241 * 23.80619 * 11 10 8 13 13 C 1.53779 * 113.61325 * 155.00664 * 11 10 8 14 14 C 1.53775 * 87.08360 * 139.97873 * 13 11 10 15 15 H 1.09000 * 113.61796 * 89.11790 * 14 13 11 16 16 C 1.52998 * 113.61562 * 219.93227 * 14 13 11 17 17 O 1.42904 * 109.47343 * 185.00127 * 16 14 13 18 18 C 1.53777 * 87.08281 * 334.56647 * 14 13 11 19 19 C 1.38749 * 119.94596 * 359.97438 * 5 4 3 20 20 C 1.50705 * 119.97406 * 179.97438 * 19 5 4 21 21 O 1.42899 * 109.46620 * 75.00645 * 20 19 5 22 22 Si 1.86298 * 109.47260 * 195.00394 * 20 19 5 23 23 C 1.38194 * 120.05431 * 0.02719 * 19 5 4 24 24 C 1.38159 * 120.11019 * 359.95366 * 23 19 5 25 25 H 1.08997 * 109.47032 * 300.00038 * 1 2 3 26 26 H 1.09003 * 109.46829 * 60.00309 * 1 2 3 27 27 H 1.08997 * 109.46858 * 180.02562 * 1 2 3 28 28 H 1.08003 * 120.06004 * 0.02562 * 4 3 2 29 29 H 1.09003 * 109.46964 * 300.00788 * 7 6 5 30 30 H 1.08997 * 109.46893 * 60.00320 * 7 6 5 31 31 H 0.96999 * 119.99896 * 0.02562 * 10 8 7 32 32 H 1.09005 * 113.61591 * 254.52814 * 13 11 10 33 33 H 1.09001 * 113.61942 * 25.42881 * 13 11 10 34 34 H 1.09003 * 109.47297 * 305.00139 * 16 14 13 35 35 H 1.09002 * 109.47268 * 64.99853 * 16 14 13 36 36 H 0.96696 * 113.99738 * 180.02562 * 17 16 14 37 37 H 1.08994 * 113.61127 * 270.88538 * 18 14 13 38 38 H 1.08998 * 113.61874 * 139.98392 * 18 14 13 39 39 H 1.08998 * 109.47228 * 315.00583 * 20 19 5 40 40 H 0.96705 * 113.99765 * 180.02562 * 21 20 19 41 41 H 1.48502 * 110.00022 * 178.68345 * 22 20 19 42 42 H 1.48497 * 110.00028 * 300.00371 * 22 20 19 43 43 H 1.08000 * 119.94322 * 179.97438 * 23 19 5 44 44 H 1.08001 * 119.96976 * 180.02562 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2841 0.0005 5 6 4.0567 2.5210 0.0000 6 8 5.4136 2.5960 0.0061 7 6 6.1317 1.3605 0.0135 8 6 7.6124 1.6401 0.0202 9 8 8.0134 2.7847 0.0192 10 7 8.4912 0.6182 0.0283 11 6 9.9307 0.8901 0.0353 12 1 10.1739 1.8730 0.4390 13 6 10.7697 -0.2486 0.6389 14 6 11.7901 0.0154 -0.4808 15 1 12.5427 0.7593 -0.2193 16 6 12.3953 -1.2596 -1.0716 17 8 13.4099 -0.9120 -2.0160 18 6 10.6220 0.5838 -1.3038 19 6 3.2971 3.6821 -0.0016 20 6 3.9774 5.0269 -0.0016 21 8 4.5050 5.2936 -1.3026 22 14 2.7434 6.3471 0.4508 23 6 1.9173 3.6065 -0.0021 24 6 1.2906 2.3752 -0.0020 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3633 -1.0276 0.0005 28 1 4.0198 0.3792 0.0005 29 1 5.8657 0.7910 0.9041 30 1 5.8742 0.7854 -0.8758 31 1 8.1705 -0.2972 0.0294 32 1 11.1498 -0.0293 1.6367 33 1 10.2915 -1.2259 0.5724 34 1 12.8324 -1.8584 -0.2725 35 1 11.6154 -1.8343 -1.5712 36 1 13.8377 -1.6731 -2.4315 37 1 10.1035 -0.1659 -1.9014 38 1 10.8829 1.4751 -1.8745 39 1 4.7891 5.0235 0.7259 40 1 4.9582 6.1447 -1.3763 41 1 3.4091 7.6742 0.4854 42 1 1.6317 6.3620 -0.5336 43 1 1.3278 4.5114 -0.0030 44 1 0.2121 2.3187 -0.0028 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12366696_4974312.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:40 Heat of formation + Delta-G solvation = -132.643260 kcal Electronic energy + Delta-G solvation = -27184.553579 eV Core-core repulsion = 23070.562729 eV Total energy + Delta-G solvation = -4113.990850 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.85948 -41.22970 -40.18590 -39.44933 -38.24646 -37.26490 -37.08412 -34.70210 -32.41079 -31.49700 -29.94244 -28.47098 -28.21152 -26.73950 -26.07976 -24.21104 -23.01481 -22.38364 -21.72435 -20.65913 -19.90091 -18.57695 -18.51921 -18.17947 -17.94792 -17.47426 -17.35664 -17.11485 -16.87279 -16.65129 -16.35755 -15.77309 -15.71907 -15.61000 -15.27636 -15.13653 -14.88191 -14.41444 -14.03497 -13.79650 -13.69710 -13.49082 -13.40302 -13.34327 -13.20968 -12.72756 -12.51565 -12.42553 -12.33815 -11.99477 -11.75862 -11.75288 -11.61653 -11.49608 -11.03011 -10.80699 -10.41680 -10.16209 -9.71413 -9.11535 -4.94985 0.18137 0.29200 1.29793 1.37878 1.42772 1.58357 1.90647 2.23807 2.51966 2.56653 3.21999 3.41108 3.46363 3.51951 3.66331 3.70847 3.76374 3.86980 3.94238 4.00859 4.03555 4.04946 4.18100 4.29646 4.36406 4.41710 4.42611 4.43232 4.46171 4.60468 4.62511 4.68530 4.74942 4.79107 4.79451 4.98055 4.99606 5.03941 5.21452 5.21719 5.28657 5.44205 5.50923 6.10768 6.34299 6.42411 6.58570 6.89261 7.08389 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.328 6.328 3 C 0.165 3.835 4 C -0.251 4.251 5 C 0.176 3.824 6 O -0.303 6.303 7 C 0.034 3.966 8 C 0.514 3.486 9 O -0.571 6.571 10 N -0.698 5.698 11 C 0.117 3.883 12 H 0.092 0.908 13 C -0.117 4.117 14 C -0.112 4.112 15 H 0.086 0.914 16 C 0.085 3.915 17 O -0.601 6.601 18 C -0.145 4.145 19 C -0.161 4.161 20 C -0.082 4.082 21 O -0.558 6.558 22 Si 0.780 3.220 23 C -0.042 4.042 24 C -0.238 4.238 25 H 0.071 0.929 26 H 0.065 0.935 27 H 0.118 0.882 28 H 0.157 0.843 29 H 0.128 0.872 30 H 0.118 0.882 31 H 0.422 0.578 32 H 0.086 0.914 33 H 0.116 0.884 34 H 0.062 0.938 35 H 0.062 0.938 36 H 0.397 0.603 37 H 0.098 0.902 38 H 0.050 0.950 39 H 0.066 0.934 40 H 0.387 0.613 41 H -0.291 1.291 42 H -0.280 1.280 43 H 0.151 0.849 44 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.544 -8.363 3.720 9.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.241 6.241 3 C 0.119 3.881 4 C -0.270 4.270 5 C 0.129 3.871 6 O -0.216 6.216 7 C -0.044 4.044 8 C 0.300 3.700 9 O -0.449 6.449 10 N -0.351 5.351 11 C 0.012 3.988 12 H 0.110 0.890 13 C -0.155 4.155 14 C -0.131 4.131 15 H 0.104 0.896 16 C 0.007 3.993 17 O -0.410 6.410 18 C -0.184 4.184 19 C -0.162 4.162 20 C -0.189 4.189 21 O -0.367 6.367 22 Si 0.684 3.316 23 C -0.059 4.059 24 C -0.256 4.256 25 H 0.090 0.910 26 H 0.084 0.916 27 H 0.136 0.864 28 H 0.175 0.825 29 H 0.145 0.855 30 H 0.136 0.864 31 H 0.260 0.740 32 H 0.105 0.895 33 H 0.134 0.866 34 H 0.080 0.920 35 H 0.080 0.920 36 H 0.246 0.754 37 H 0.116 0.884 38 H 0.069 0.931 39 H 0.085 0.915 40 H 0.237 0.763 41 H -0.218 1.218 42 H -0.207 1.207 43 H 0.169 0.831 44 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -3.881 -6.857 3.542 8.638 hybrid contribution 1.041 -0.363 -1.233 1.654 sum -2.840 -7.220 2.309 8.095 Atomic orbital electron populations 1.23411 0.76002 1.05755 1.02676 1.86052 1.23752 1.26373 1.87925 1.18842 0.91662 0.84941 0.92683 1.20551 0.93410 0.97360 1.15663 1.18565 0.81784 0.93173 0.93541 1.86192 1.15418 1.31795 1.88160 1.22764 0.88412 0.86484 1.06709 1.20515 0.88548 0.85318 0.75577 1.90755 1.80779 1.23328 1.50020 1.45663 1.05603 1.09497 1.74374 1.22495 0.78372 1.00243 0.97660 0.88999 1.23292 0.94714 0.98992 0.98472 1.22323 0.95741 0.98082 0.97001 0.89601 1.22245 0.90179 0.95383 0.91448 1.86457 1.55153 1.39058 1.60323 1.23548 0.96699 1.01332 0.96809 1.18757 0.93168 0.92352 1.11955 1.25001 1.04750 1.01897 0.87269 1.86557 1.76328 1.42853 1.30939 0.94164 0.76600 0.73513 0.87340 1.20900 0.92041 0.98839 0.94169 1.21385 1.01674 0.91125 1.11434 0.91014 0.91650 0.86402 0.82538 0.85476 0.86426 0.73959 0.89526 0.86589 0.92024 0.92025 0.75367 0.88364 0.93086 0.91543 0.76329 1.21828 1.20685 0.83134 0.82370 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.51 10.49 -92.41 -0.97 -1.48 16 3 C 0.17 0.53 6.68 22.49 0.15 0.68 16 4 C -0.25 -0.91 8.97 22.46 0.20 -0.71 16 5 C 0.18 1.34 6.66 22.49 0.15 1.49 16 6 O -0.30 -2.90 8.99 -73.38 -0.66 -3.56 16 7 C 0.03 0.01 5.22 71.23 0.37 0.39 16 8 C 0.51 2.72 7.91 87.66 0.69 3.41 16 9 O -0.57 -9.64 16.10 16.01 0.26 -9.38 16 10 N -0.70 1.70 5.35 -440.05 -2.36 -0.66 16 11 C 0.12 0.00 4.24 45.52 0.19 0.19 16 12 H 0.09 0.53 7.46 -2.39 -0.02 0.52 16 13 C -0.12 0.69 7.39 31.12 0.23 0.92 16 14 C -0.11 0.17 4.01 -10.27 -0.04 0.13 16 15 H 0.09 0.16 8.14 -2.39 -0.02 0.14 16 16 C 0.08 -0.28 6.89 71.98 0.50 0.21 16 17 O -0.60 -0.76 13.66 -148.98 -2.04 -2.79 16 18 C -0.15 -0.08 7.43 31.12 0.23 0.15 16 19 C -0.16 -1.22 5.31 -19.75 -0.10 -1.33 16 20 C -0.08 -0.60 2.37 71.24 0.17 -0.43 16 21 O -0.56 -6.12 12.86 -148.98 -1.92 -8.04 16 22 Si 0.78 1.25 30.19 68.60 2.07 3.32 16 23 C -0.04 -0.14 8.65 22.24 0.19 0.05 16 24 C -0.24 -0.32 9.04 22.38 0.20 -0.12 16 25 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 26 H 0.06 -0.44 7.66 -2.39 -0.02 -0.46 16 27 H 0.12 -1.05 8.14 -2.39 -0.02 -1.07 16 28 H 0.16 -0.25 6.30 -2.91 -0.02 -0.27 16 29 H 0.13 -0.81 7.67 -2.39 -0.02 -0.82 16 30 H 0.12 -0.53 7.65 -2.39 -0.02 -0.55 16 31 H 0.42 -4.45 8.73 -92.71 -0.81 -5.26 16 32 H 0.09 -0.53 8.14 -2.38 -0.02 -0.55 16 33 H 0.12 -1.26 8.08 -2.39 -0.02 -1.28 16 34 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 35 H 0.06 -0.39 7.85 -2.39 -0.02 -0.41 16 36 H 0.40 -2.94 9.12 -74.06 -0.68 -3.61 16 37 H 0.10 -0.20 7.90 -2.39 -0.02 -0.22 16 38 H 0.05 0.29 8.14 -2.39 -0.02 0.27 16 39 H 0.07 0.53 7.82 -2.39 -0.02 0.52 16 40 H 0.39 1.43 8.74 -74.05 -0.65 0.78 16 41 H -0.29 -1.82 7.11 99.48 0.71 -1.11 16 42 H -0.28 -1.53 6.75 99.48 0.67 -0.86 16 43 H 0.15 -0.05 4.89 -2.91 -0.01 -0.06 16 44 H 0.16 -0.67 6.29 -2.91 -0.02 -0.69 16 Total: 0.00 -30.07 366.60 -2.43 -32.50 By element: Atomic # 1 Polarization: -14.90 SS G_CDS: -1.07 Total: -15.97 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: 4.25 Total: 6.06 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -2.36 Total: -0.66 kcal Atomic # 8 Polarization: -19.93 SS G_CDS: -5.32 Total: -25.25 kcal Atomic # 14 Polarization: 1.25 SS G_CDS: 2.07 Total: 3.32 kcal Total: -30.07 -2.43 -32.50 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4974312.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.143 kcal (2) G-P(sol) polarization free energy of solvation -30.071 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.214 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.501 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds