Wall clock time and date at job start Tue Mar 9 2021 13:07:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35994 * 117.00115 * 2 1 4 4 C 1.39151 * 120.07462 * 179.97438 * 3 2 1 5 5 O 1.35990 * 120.07504 * 0.02562 * 4 3 2 6 6 C 1.42903 * 117.00457 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47493 * 179.97438 * 6 5 4 8 8 O 1.21283 * 119.99819 * 0.02562 * 7 6 5 9 9 N 1.34777 * 120.00335 * 180.02562 * 7 6 5 10 10 C 1.46496 * 120.00012 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.85455 * 336.19508 * 10 9 7 12 12 C 1.53782 * 113.61177 * 107.50054 * 10 9 7 13 13 C 1.53792 * 87.08061 * 139.97716 * 12 10 9 14 14 H 1.09008 * 113.68620 * 89.12445 * 13 12 10 15 15 C 1.52990 * 113.61537 * 220.01809 * 13 12 10 16 16 O 1.42906 * 109.47404 * 272.49699 * 15 13 12 17 17 C 1.53780 * 87.07907 * 334.56850 * 13 12 10 18 18 C 1.38567 * 119.85390 * 180.02562 * 4 3 2 19 19 C 1.38245 * 119.99870 * 359.72061 * 18 4 3 20 20 C 1.38255 * 120.14566 * 0.55853 * 19 18 4 21 21 C 1.50699 * 119.92682 * 179.72161 * 20 19 18 22 22 O 1.42901 * 109.46830 * 119.72111 * 21 20 19 23 23 Si 1.86298 * 109.46950 * 359.72548 * 21 20 19 24 24 C 1.38241 * 120.14388 * 359.44082 * 20 19 18 25 25 H 1.08995 * 109.47937 * 59.99338 * 1 2 3 26 26 H 1.09004 * 109.46790 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.46976 * 299.98778 * 1 2 3 28 28 H 1.08996 * 109.47083 * 300.00471 * 6 5 4 29 29 H 1.09005 * 109.46866 * 59.99799 * 6 5 4 30 30 H 0.97002 * 119.99381 * 359.97438 * 9 7 6 31 31 H 1.08997 * 113.61764 * 254.52492 * 12 10 9 32 32 H 1.09001 * 113.61454 * 25.43395 * 12 10 9 33 33 H 1.08997 * 109.47407 * 32.49876 * 15 13 12 34 34 H 1.09008 * 109.46930 * 152.49919 * 15 13 12 35 35 H 0.96693 * 114.00070 * 180.02562 * 16 15 13 36 36 H 1.09001 * 113.61167 * 270.87949 * 17 13 12 37 37 H 1.09007 * 113.69051 * 139.98991 * 17 13 12 38 38 H 1.08001 * 120.00233 * 179.97438 * 18 4 3 39 39 H 1.08003 * 119.92751 * 180.27118 * 19 18 4 40 40 H 1.08991 * 109.47351 * 239.72258 * 21 20 19 41 41 H 0.96708 * 114.00246 * 299.99864 * 22 21 20 42 42 H 1.48506 * 109.99834 * 180.02562 * 23 21 20 43 43 H 1.48502 * 110.00011 * 301.31529 * 23 21 20 44 44 H 1.07998 * 119.99949 * 180.30308 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6003 0.3007 0.0017 7 6 6.2519 -1.0581 0.0021 8 8 5.5670 -2.0591 0.0011 9 7 7.5957 -1.1612 0.0037 10 6 8.2291 -2.4821 0.0036 11 1 7.5830 -3.2615 0.4077 12 6 8.8791 -2.8535 -1.3397 13 6 10.0327 -3.4608 -0.5239 14 1 9.8814 -4.5087 -0.2645 15 6 11.4148 -3.1903 -1.1215 16 8 11.7315 -4.2106 -2.0706 17 6 9.6462 -2.4859 0.6008 18 6 4.0602 2.5234 0.0011 19 6 3.3029 3.6799 -0.0048 20 6 1.9223 3.6057 0.0005 21 6 1.1015 4.8696 0.0004 22 8 0.2776 4.9024 -1.1667 23 14 2.2364 6.3470 0.0011 24 6 1.2932 2.3748 0.0000 25 1 -0.3635 0.5139 -0.8898 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5137 0.8901 28 1 5.9072 0.8509 -0.8877 29 1 5.9059 0.8501 0.8922 30 1 8.1435 -0.3606 0.0042 31 1 8.3129 -3.5896 -1.9101 32 1 9.1735 -1.9897 -1.9359 33 1 11.4123 -2.2201 -1.6183 34 1 12.1606 -3.1895 -0.3265 35 1 12.5961 -4.1030 -2.4901 36 1 10.1503 -1.5216 0.5351 37 1 9.6989 -2.9240 1.5975 38 1 5.1385 2.5841 0.0019 39 1 3.7907 4.6434 -0.0088 40 1 0.4724 4.8943 0.8901 41 1 0.7718 4.8830 -1.9977 42 1 1.4391 7.5999 0.0016 43 1 3.1206 6.3078 1.1935 44 1 0.2146 2.3196 -0.0008 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:46 Heat of formation + Delta-G solvation = -127.169046 kcal Electronic energy + Delta-G solvation = -26889.413412 eV Core-core repulsion = 22775.659941 eV Total energy + Delta-G solvation = -4113.753470 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.80186 -41.19959 -39.95368 -39.03203 -38.79078 -37.29391 -36.90998 -34.60684 -32.04166 -31.46078 -30.02280 -28.57646 -28.26463 -26.82509 -26.20355 -24.04470 -23.11440 -22.44938 -21.65383 -20.72303 -19.76565 -18.58797 -18.38364 -18.21774 -17.86599 -17.52257 -17.39362 -16.97655 -16.59632 -16.44364 -16.10252 -15.92355 -15.67236 -15.66777 -15.45490 -15.10211 -14.83863 -14.45509 -14.25332 -13.73712 -13.68608 -13.60980 -13.58870 -13.28741 -12.78253 -12.64934 -12.51027 -12.33909 -12.18239 -12.06603 -12.01043 -11.81817 -11.73946 -11.55831 -10.94125 -10.81036 -10.48073 -10.11639 -9.78407 -8.84627 -5.07540 0.17720 0.29787 1.25797 1.46229 1.50896 1.59288 1.93645 2.32540 2.54265 2.57545 3.07139 3.33450 3.40628 3.47476 3.55950 3.63300 3.70779 3.76800 3.80004 3.91248 3.92863 3.93772 4.12733 4.25858 4.28307 4.29927 4.34459 4.35004 4.47603 4.48348 4.53828 4.57147 4.65077 4.66023 4.72794 4.92551 4.99868 5.00505 5.09854 5.19374 5.36841 5.45388 5.55931 5.97324 6.34491 6.53735 6.55588 6.62083 7.12562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.516 3.484 8 O -0.508 6.508 9 N -0.719 5.719 10 C 0.124 3.876 11 H 0.119 0.881 12 C -0.144 4.144 13 C -0.109 4.109 14 H 0.103 0.897 15 C 0.087 3.913 16 O -0.573 6.573 17 C -0.138 4.138 18 C -0.170 4.170 19 C -0.114 4.114 20 C -0.115 4.115 21 C -0.066 4.066 22 O -0.541 6.541 23 Si 0.691 3.309 24 C -0.146 4.146 25 H 0.057 0.943 26 H 0.103 0.897 27 H 0.055 0.945 28 H 0.095 0.905 29 H 0.094 0.906 30 H 0.402 0.598 31 H 0.076 0.924 32 H 0.086 0.914 33 H 0.047 0.953 34 H 0.048 0.952 35 H 0.381 0.619 36 H 0.089 0.911 37 H 0.081 0.919 38 H 0.139 0.861 39 H 0.132 0.868 40 H 0.113 0.887 41 H 0.380 0.620 42 H -0.255 1.255 43 H -0.258 1.258 44 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.042 4.568 -1.124 7.658 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.301 3.699 8 O -0.381 6.381 9 N -0.372 5.372 10 C 0.020 3.980 11 H 0.137 0.863 12 C -0.183 4.183 13 C -0.128 4.128 14 H 0.121 0.879 15 C 0.009 3.991 16 O -0.379 6.379 17 C -0.176 4.176 18 C -0.188 4.188 19 C -0.132 4.132 20 C -0.116 4.116 21 C -0.177 4.177 22 O -0.346 6.346 23 Si 0.593 3.407 24 C -0.165 4.165 25 H 0.076 0.924 26 H 0.121 0.879 27 H 0.074 0.926 28 H 0.113 0.887 29 H 0.112 0.888 30 H 0.237 0.763 31 H 0.095 0.905 32 H 0.104 0.896 33 H 0.065 0.935 34 H 0.066 0.934 35 H 0.228 0.772 36 H 0.107 0.893 37 H 0.100 0.900 38 H 0.157 0.843 39 H 0.149 0.851 40 H 0.131 0.869 41 H 0.227 0.773 42 H -0.180 1.180 43 H -0.183 1.183 44 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.703 3.957 -0.057 6.147 hybrid contribution 0.498 0.511 0.222 0.747 sum 5.201 4.468 0.164 6.859 Atomic orbital electron populations 1.23131 0.78112 1.04410 1.01366 1.86251 1.21338 1.25332 1.88525 1.18288 0.89025 0.85577 1.01006 1.18281 0.88317 0.85776 1.01801 1.86282 1.16055 1.27737 1.88840 1.22492 0.81298 0.96336 1.03944 1.20070 0.82605 0.90541 0.76726 1.90799 1.62617 1.38037 1.46683 1.45806 1.05819 1.09377 1.76186 1.22553 0.92750 0.85410 0.97317 0.86296 1.23537 0.96720 1.01177 0.96837 1.22341 0.93572 1.00516 0.96380 0.87862 1.22141 0.95636 0.90201 0.91096 1.86501 1.41134 1.51015 1.59217 1.23369 0.95061 1.00167 0.99010 1.20989 1.00448 0.90690 1.06699 1.20684 0.92781 0.97837 1.01892 1.20040 0.93690 0.95206 1.02674 1.25036 0.99555 1.01849 0.91253 1.86499 1.35753 1.96937 1.15414 0.94695 0.80873 0.76538 0.88577 1.20932 1.00419 0.90392 1.04755 0.92414 0.87867 0.92625 0.88735 0.88834 0.76342 0.90494 0.89571 0.93502 0.93389 0.77195 0.89250 0.90029 0.84311 0.85074 0.86928 0.77307 1.18015 1.18256 0.84157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.37 10.28 -34.22 -0.35 -1.72 16 3 C 0.11 0.37 6.70 -39.12 -0.26 0.11 16 4 C 0.10 0.29 6.70 -39.12 -0.26 0.03 16 5 O -0.28 -1.12 9.45 -47.33 -0.45 -1.57 16 6 C 0.04 -0.02 5.22 36.00 0.19 0.17 16 7 C 0.52 0.95 7.91 -10.99 -0.09 0.86 16 8 O -0.51 -3.68 16.10 -14.35 -0.23 -3.91 16 9 N -0.72 1.14 5.35 -53.02 -0.28 0.86 16 10 C 0.12 -0.09 4.24 -67.12 -0.28 -0.37 16 11 H 0.12 0.17 7.46 -51.93 -0.39 -0.22 16 12 C -0.14 0.08 7.43 -25.91 -0.19 -0.11 16 13 C -0.11 0.13 4.01 -89.81 -0.36 -0.23 16 14 H 0.10 -0.01 8.14 -51.92 -0.42 -0.43 16 15 C 0.09 -0.14 6.88 37.15 0.26 0.12 16 16 O -0.57 -0.19 13.66 -35.23 -0.48 -0.67 16 17 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 18 C -0.17 0.05 9.04 -39.46 -0.36 -0.30 16 19 C -0.11 0.08 8.66 -39.57 -0.34 -0.27 16 20 C -0.12 -0.04 5.39 -104.61 -0.56 -0.61 16 21 C -0.07 0.02 2.82 36.01 0.10 0.13 16 22 O -0.54 -0.02 12.77 -35.23 -0.45 -0.47 16 23 Si 0.69 -1.02 29.78 -169.99 -5.06 -6.08 16 24 C -0.15 -0.23 8.60 -39.46 -0.34 -0.57 16 25 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 26 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 28 H 0.09 -0.33 7.66 -51.93 -0.40 -0.73 16 29 H 0.09 -0.32 7.66 -51.93 -0.40 -0.71 16 30 H 0.40 -2.05 8.73 -40.82 -0.36 -2.40 16 31 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 32 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 33 H 0.05 -0.13 7.84 -51.93 -0.41 -0.53 16 34 H 0.05 -0.12 8.14 -51.92 -0.42 -0.54 16 35 H 0.38 -1.48 9.12 45.56 0.42 -1.06 16 36 H 0.09 -0.39 8.08 -51.93 -0.42 -0.81 16 37 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 38 H 0.14 -0.49 6.30 -52.49 -0.33 -0.82 16 39 H 0.13 -0.38 4.87 -52.48 -0.26 -0.64 16 40 H 0.11 0.01 7.96 -51.93 -0.41 -0.41 16 41 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 42 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 43 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 44 H 0.14 0.10 6.30 -52.49 -0.33 -0.24 16 LS Contribution 367.03 15.07 5.53 5.53 Total: 0.00 -12.32 367.03 -8.88 -21.20 By element: Atomic # 1 Polarization: -7.90 SS G_CDS: -5.40 Total: -13.30 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -1.71 Total: 0.13 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -0.28 Total: 0.86 kcal Atomic # 8 Polarization: -6.38 SS G_CDS: -1.96 Total: -8.34 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.06 Total: -6.08 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -12.32 -8.88 -21.20 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.969 kcal (2) G-P(sol) polarization free energy of solvation -12.316 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.200 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds