Wall clock time and date at job start Tue Mar 9 2021 13:07:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35994 * 117.00115 * 2 1 4 4 C 1.39151 * 120.07462 * 179.97438 * 3 2 1 5 5 O 1.35990 * 120.07504 * 0.02562 * 4 3 2 6 6 C 1.42903 * 117.00457 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47493 * 179.97438 * 6 5 4 8 8 O 1.21283 * 119.99819 * 0.02562 * 7 6 5 9 9 N 1.34777 * 120.00335 * 180.02562 * 7 6 5 10 10 C 1.46496 * 120.00012 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.85455 * 336.19508 * 10 9 7 12 12 C 1.53782 * 113.61177 * 107.50054 * 10 9 7 13 13 C 1.53792 * 87.08061 * 139.97716 * 12 10 9 14 14 H 1.09008 * 113.68620 * 89.12445 * 13 12 10 15 15 C 1.52990 * 113.61537 * 220.01809 * 13 12 10 16 16 O 1.42906 * 109.47404 * 272.49699 * 15 13 12 17 17 C 1.53780 * 87.07907 * 334.56850 * 13 12 10 18 18 C 1.38567 * 119.85390 * 180.02562 * 4 3 2 19 19 C 1.38245 * 119.99870 * 359.72061 * 18 4 3 20 20 C 1.38255 * 120.14566 * 0.55853 * 19 18 4 21 21 C 1.50699 * 119.92682 * 179.72161 * 20 19 18 22 22 O 1.42901 * 109.46830 * 119.72111 * 21 20 19 23 23 Si 1.86298 * 109.46950 * 359.72548 * 21 20 19 24 24 C 1.38241 * 120.14388 * 359.44082 * 20 19 18 25 25 H 1.08995 * 109.47937 * 59.99338 * 1 2 3 26 26 H 1.09004 * 109.46790 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.46976 * 299.98778 * 1 2 3 28 28 H 1.08996 * 109.47083 * 300.00471 * 6 5 4 29 29 H 1.09005 * 109.46866 * 59.99799 * 6 5 4 30 30 H 0.97002 * 119.99381 * 359.97438 * 9 7 6 31 31 H 1.08997 * 113.61764 * 254.52492 * 12 10 9 32 32 H 1.09001 * 113.61454 * 25.43395 * 12 10 9 33 33 H 1.08997 * 109.47407 * 32.49876 * 15 13 12 34 34 H 1.09008 * 109.46930 * 152.49919 * 15 13 12 35 35 H 0.96693 * 114.00070 * 180.02562 * 16 15 13 36 36 H 1.09001 * 113.61167 * 270.87949 * 17 13 12 37 37 H 1.09007 * 113.69051 * 139.98991 * 17 13 12 38 38 H 1.08001 * 120.00233 * 179.97438 * 18 4 3 39 39 H 1.08003 * 119.92751 * 180.27118 * 19 18 4 40 40 H 1.08991 * 109.47351 * 239.72258 * 21 20 19 41 41 H 0.96708 * 114.00246 * 299.99864 * 22 21 20 42 42 H 1.48506 * 109.99834 * 180.02562 * 23 21 20 43 43 H 1.48502 * 110.00011 * 301.31529 * 23 21 20 44 44 H 1.07998 * 119.99949 * 180.30308 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6003 0.3007 0.0017 7 6 6.2519 -1.0581 0.0021 8 8 5.5670 -2.0591 0.0011 9 7 7.5957 -1.1612 0.0037 10 6 8.2291 -2.4821 0.0036 11 1 7.5830 -3.2615 0.4077 12 6 8.8791 -2.8535 -1.3397 13 6 10.0327 -3.4608 -0.5239 14 1 9.8814 -4.5087 -0.2645 15 6 11.4148 -3.1903 -1.1215 16 8 11.7315 -4.2106 -2.0706 17 6 9.6462 -2.4859 0.6008 18 6 4.0602 2.5234 0.0011 19 6 3.3029 3.6799 -0.0048 20 6 1.9223 3.6057 0.0005 21 6 1.1015 4.8696 0.0004 22 8 0.2776 4.9024 -1.1667 23 14 2.2364 6.3470 0.0011 24 6 1.2932 2.3748 0.0000 25 1 -0.3635 0.5139 -0.8898 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5137 0.8901 28 1 5.9072 0.8509 -0.8877 29 1 5.9059 0.8501 0.8922 30 1 8.1435 -0.3606 0.0042 31 1 8.3129 -3.5896 -1.9101 32 1 9.1735 -1.9897 -1.9359 33 1 11.4123 -2.2201 -1.6183 34 1 12.1606 -3.1895 -0.3265 35 1 12.5961 -4.1030 -2.4901 36 1 10.1503 -1.5216 0.5351 37 1 9.6989 -2.9240 1.5975 38 1 5.1385 2.5841 0.0019 39 1 3.7907 4.6434 -0.0088 40 1 0.4724 4.8943 0.8901 41 1 0.7718 4.8830 -1.9977 42 1 1.4391 7.5999 0.0016 43 1 3.1206 6.3078 1.1935 44 1 0.2146 2.3196 -0.0008 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12366696_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:46 Heat of formation + Delta-G solvation = -134.198914 kcal Electronic energy + Delta-G solvation = -26889.718250 eV Core-core repulsion = 22775.659941 eV Total energy + Delta-G solvation = -4114.058308 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.84319 -41.22098 -39.97625 -39.13460 -38.82093 -37.23789 -36.90895 -34.67283 -32.04376 -31.46604 -30.00153 -28.57241 -28.22069 -26.71439 -26.18714 -24.01589 -23.10147 -22.45649 -21.70110 -20.63901 -19.79483 -18.59324 -18.38413 -18.17807 -17.87546 -17.53605 -17.40690 -16.99140 -16.68068 -16.38152 -16.09118 -15.90461 -15.68244 -15.65012 -15.46559 -15.12822 -14.80212 -14.43592 -14.29365 -13.77795 -13.63307 -13.55267 -13.44608 -13.30197 -12.71281 -12.64919 -12.54630 -12.30228 -12.17978 -12.06839 -12.00919 -11.73490 -11.73215 -11.47008 -10.98800 -10.78161 -10.43704 -10.12904 -9.79184 -8.91677 -4.96255 0.16444 0.27411 1.34231 1.42999 1.49594 1.67414 2.00491 2.30224 2.56126 2.58077 3.24355 3.43712 3.48972 3.54212 3.68063 3.69970 3.79044 3.86599 3.90727 4.03512 4.04483 4.12306 4.13575 4.28013 4.29074 4.35909 4.44050 4.45827 4.49810 4.63640 4.64711 4.65220 4.71110 4.77714 4.81847 5.00089 5.01124 5.06516 5.11995 5.24404 5.36738 5.52712 5.59632 5.96533 6.41828 6.54396 6.77811 6.91648 7.14572 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.335 6.335 3 C 0.075 3.925 4 C 0.084 3.916 5 O -0.316 6.316 6 C 0.035 3.965 7 C 0.510 3.490 8 O -0.577 6.577 9 N -0.697 5.697 10 C 0.116 3.884 11 H 0.088 0.912 12 C -0.143 4.143 13 C -0.114 4.114 14 H 0.083 0.917 15 C 0.085 3.915 16 O -0.602 6.602 17 C -0.117 4.117 18 C -0.159 4.159 19 C -0.110 4.110 20 C -0.119 4.119 21 C -0.077 4.077 22 O -0.558 6.558 23 Si 0.789 3.211 24 C -0.152 4.152 25 H 0.065 0.935 26 H 0.110 0.890 27 H 0.062 0.938 28 H 0.131 0.869 29 H 0.128 0.872 30 H 0.424 0.576 31 H 0.049 0.951 32 H 0.102 0.898 33 H 0.064 0.936 34 H 0.060 0.940 35 H 0.397 0.603 36 H 0.118 0.882 37 H 0.083 0.917 38 H 0.177 0.823 39 H 0.160 0.840 40 H 0.104 0.896 41 H 0.395 0.605 42 H -0.304 1.304 43 H -0.278 1.278 44 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.344 7.115 -1.171 11.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.250 6.250 3 C 0.030 3.970 4 C 0.039 3.961 5 O -0.230 6.230 6 C -0.043 4.043 7 C 0.297 3.703 8 O -0.455 6.455 9 N -0.350 5.350 10 C 0.011 3.989 11 H 0.106 0.894 12 C -0.182 4.182 13 C -0.133 4.133 14 H 0.102 0.898 15 C 0.008 3.992 16 O -0.410 6.410 17 C -0.155 4.155 18 C -0.177 4.177 19 C -0.127 4.127 20 C -0.120 4.120 21 C -0.186 4.186 22 O -0.366 6.366 23 Si 0.694 3.306 24 C -0.171 4.171 25 H 0.084 0.916 26 H 0.129 0.871 27 H 0.081 0.919 28 H 0.148 0.852 29 H 0.146 0.854 30 H 0.262 0.738 31 H 0.068 0.932 32 H 0.120 0.880 33 H 0.082 0.918 34 H 0.079 0.921 35 H 0.246 0.754 36 H 0.136 0.864 37 H 0.102 0.898 38 H 0.195 0.805 39 H 0.177 0.823 40 H 0.121 0.879 41 H 0.245 0.755 42 H -0.232 1.232 43 H -0.205 1.205 44 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 7.063 6.516 -0.127 9.611 hybrid contribution -0.234 -0.264 0.221 0.416 sum 6.830 6.252 0.095 9.260 Atomic orbital electron populations 1.23275 0.76852 1.05163 1.02074 1.86190 1.22966 1.26692 1.89106 1.18692 0.89972 0.85599 1.02751 1.18597 0.88168 0.86569 1.02777 1.86225 1.18305 1.29130 1.89308 1.22794 0.79288 0.95034 1.07140 1.20686 0.83252 0.90899 0.75476 1.90773 1.64232 1.40364 1.50139 1.45643 1.05025 1.09978 1.74401 1.22472 0.93448 0.85253 0.97745 0.89396 1.23544 0.96792 1.01145 0.96711 1.22328 0.93980 0.99908 0.97066 0.89827 1.22246 0.95215 0.90438 0.91319 1.86458 1.42601 1.52100 1.59879 1.23293 0.92859 1.00992 0.98325 1.21394 1.02321 0.89256 1.04724 1.21017 0.92264 0.99022 1.00429 1.20209 0.94521 0.94796 1.02430 1.25283 0.99830 1.02528 0.90992 1.86463 1.36798 1.96942 1.16381 0.93617 0.78261 0.72309 0.86389 1.20996 1.00473 0.90578 1.05057 0.91641 0.87140 0.91932 0.85177 0.85437 0.73775 0.93157 0.88008 0.91791 0.92136 0.75367 0.86365 0.89802 0.80541 0.82312 0.87901 0.75454 1.23228 1.20455 0.84229 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.07 9.81 113.37 1.11 1.18 16 2 O -0.34 -3.96 10.28 -79.62 -0.82 -4.78 16 3 C 0.08 0.64 6.70 22.57 0.15 0.79 16 4 C 0.08 0.48 6.70 22.57 0.15 0.64 16 5 O -0.32 -2.84 9.45 -67.02 -0.63 -3.48 16 6 C 0.04 -0.08 5.22 71.23 0.37 0.29 16 7 C 0.51 2.17 7.91 87.66 0.69 2.86 16 8 O -0.58 -10.05 16.10 16.00 0.26 -9.80 16 9 N -0.70 2.68 5.35 -440.04 -2.36 0.32 16 10 C 0.12 -0.08 4.24 45.52 0.19 0.12 16 11 H 0.09 0.52 7.46 -2.39 -0.02 0.51 16 12 C -0.14 0.06 7.43 31.12 0.23 0.30 16 13 C -0.11 0.24 4.01 -10.27 -0.04 0.20 16 14 H 0.08 0.14 8.14 -2.38 -0.02 0.12 16 15 C 0.09 -0.36 6.88 71.98 0.50 0.14 16 16 O -0.60 -0.35 13.66 -148.98 -2.04 -2.38 16 17 C -0.12 0.76 7.39 31.12 0.23 0.99 16 18 C -0.16 0.44 9.04 22.35 0.20 0.64 16 19 C -0.11 0.38 8.66 22.28 0.19 0.58 16 20 C -0.12 -0.02 5.39 -19.86 -0.11 -0.13 16 21 C -0.08 0.09 2.82 71.24 0.20 0.29 16 22 O -0.56 0.08 12.77 -148.98 -1.90 -1.82 16 23 Si 0.79 -3.44 29.78 68.60 2.04 -1.40 16 24 C -0.15 -0.64 8.60 22.35 0.19 -0.45 16 25 H 0.07 0.05 7.66 -2.39 -0.02 0.04 16 26 H 0.11 0.07 8.14 -2.38 -0.02 0.05 16 27 H 0.06 0.06 7.66 -2.39 -0.02 0.04 16 28 H 0.13 -1.30 7.66 -2.39 -0.02 -1.32 16 29 H 0.13 -1.22 7.66 -2.38 -0.02 -1.24 16 30 H 0.42 -5.42 8.73 -92.71 -0.81 -6.23 16 31 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 32 H 0.10 -0.38 7.90 -2.39 -0.02 -0.40 16 33 H 0.06 -0.49 7.84 -2.39 -0.02 -0.50 16 34 H 0.06 -0.40 8.14 -2.38 -0.02 -0.42 16 35 H 0.40 -3.22 9.12 -74.06 -0.68 -3.89 16 36 H 0.12 -1.42 8.08 -2.39 -0.02 -1.44 16 37 H 0.08 -0.53 8.14 -2.38 -0.02 -0.55 16 38 H 0.18 -2.00 6.30 -2.91 -0.02 -2.02 16 39 H 0.16 -1.49 4.87 -2.91 -0.01 -1.51 16 40 H 0.10 0.05 7.96 -2.39 -0.02 0.03 16 41 H 0.40 -3.25 8.70 -74.05 -0.64 -3.90 16 42 H -0.30 -1.17 7.11 99.48 0.71 -0.46 16 43 H -0.28 0.23 7.11 99.48 0.71 0.94 16 44 H 0.14 0.42 6.30 -2.91 -0.02 0.41 16 Total: 0.00 -34.23 367.03 -2.20 -36.44 By element: Atomic # 1 Polarization: -20.51 SS G_CDS: -1.03 Total: -21.54 kcal Atomic # 6 Polarization: 4.16 SS G_CDS: 4.27 Total: 8.43 kcal Atomic # 7 Polarization: 2.68 SS G_CDS: -2.36 Total: 0.32 kcal Atomic # 8 Polarization: -17.12 SS G_CDS: -5.13 Total: -22.26 kcal Atomic # 14 Polarization: -3.44 SS G_CDS: 2.04 Total: -1.40 kcal Total: -34.23 -2.20 -36.44 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.760 kcal (2) G-P(sol) polarization free energy of solvation -34.234 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.994 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.205 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.439 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.199 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds