Wall clock time and date at job start Tue Mar 9 2021 13:08:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86303 * 109.47026 * 2 1 4 4 C 1.50701 * 109.47480 * 240.00245 * 2 1 3 5 5 C 1.34238 * 126.50414 * 105.03578 * 4 2 1 6 6 N 1.36831 * 109.93734 * 179.97438 * 5 4 2 7 7 C 1.46497 * 125.05946 * 180.27049 * 6 5 4 8 8 C 1.50706 * 109.46888 * 264.69854 * 7 6 5 9 9 O 1.21276 * 120.00049 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99784 * 180.02562 * 8 7 6 11 11 C 1.46500 * 119.99735 * 179.97438 * 10 8 7 12 12 H 1.09002 * 112.85366 * 23.80328 * 11 10 8 13 13 C 1.53783 * 113.61487 * 155.00006 * 11 10 8 14 14 C 1.53778 * 87.08408 * 139.98166 * 13 11 10 15 15 H 1.09004 * 113.61363 * 89.11669 * 14 13 11 16 16 C 1.53001 * 113.61791 * 219.93434 * 14 13 11 17 17 O 1.42898 * 109.47145 * 184.99786 * 16 14 13 18 18 C 1.53780 * 87.07925 * 334.56687 * 14 13 11 19 19 C 1.37695 * 109.87616 * 0.02562 * 6 5 4 20 20 C 1.39078 * 133.51168 * 180.02562 * 19 6 5 21 21 C 1.37791 * 119.77620 * 179.97438 * 20 19 6 22 22 C 1.38786 * 120.66938 * 0.02562 * 21 20 19 23 23 C 1.36658 * 120.52459 * 0.02562 * 22 21 20 24 24 C 1.39590 * 119.76715 * 359.95804 * 23 22 21 25 25 H 0.96701 * 113.99954 * 60.00079 * 1 2 3 26 26 H 1.09000 * 109.47195 * 119.99811 * 2 1 3 27 27 H 1.48500 * 109.99941 * 298.67847 * 3 2 1 28 28 H 1.48500 * 109.99810 * 59.99573 * 3 2 1 29 29 H 1.07994 * 125.02768 * 359.97438 * 5 4 2 30 30 H 1.09002 * 109.47359 * 24.69466 * 7 6 5 31 31 H 1.08997 * 109.47204 * 144.70083 * 7 6 5 32 32 H 0.96998 * 120.00549 * 0.02562 * 10 8 7 33 33 H 1.08998 * 113.61248 * 254.53181 * 13 11 10 34 34 H 1.08996 * 113.61399 * 25.34584 * 13 11 10 35 35 H 1.08998 * 109.47104 * 305.00058 * 16 14 13 36 36 H 1.09003 * 109.46702 * 64.99467 * 16 14 13 37 37 H 0.96705 * 113.99595 * 180.02562 * 17 16 14 38 38 H 1.08997 * 113.61502 * 270.88060 * 18 14 13 39 39 H 1.09004 * 113.61299 * 139.98089 * 18 14 13 40 40 H 1.08001 * 120.11450 * 359.97438 * 20 19 6 41 41 H 1.08001 * 119.66625 * 179.97438 * 21 20 19 42 42 H 1.08003 * 119.73668 * 179.97438 * 22 21 20 43 43 H 1.08005 * 120.11915 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.4615 -0.1376 -2.3227 6 7 2.8039 -1.0990 -3.2341 7 6 3.4145 -0.8408 -4.5405 8 6 2.3397 -0.7869 -5.5955 9 8 1.1782 -0.9488 -5.2866 10 7 2.6695 -0.5598 -6.8824 11 6 1.6247 -0.5080 -7.9081 12 1 0.6454 -0.2541 -7.5024 13 6 2.0141 0.3221 -9.1426 14 6 1.3254 -0.7604 -9.9903 15 1 0.2636 -0.5765 -10.1547 16 6 2.0761 -1.0992 -11.2797 17 8 1.3055 -2.0229 -12.0510 18 6 1.6102 -1.7348 -8.8352 19 6 2.4940 -2.3457 -2.7383 20 6 2.6293 -3.6361 -3.2391 21 6 2.2148 -4.7106 -2.4826 22 6 1.6620 -4.5192 -1.2241 23 6 1.5188 -3.2598 -0.7131 24 6 1.9323 -2.1569 -1.4621 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8900 27 1 1.5879 2.4585 -1.2243 28 1 1.5613 2.4679 1.2085 29 1 2.5976 0.9247 -2.4614 30 1 3.9439 0.1116 -4.5122 31 1 4.1167 -1.6400 -4.7777 32 1 3.5986 -0.4315 -7.1297 33 1 1.5206 1.2929 -9.1893 34 1 3.0901 0.3861 -9.3041 35 1 2.2361 -0.1885 -11.8569 36 1 3.0389 -1.5465 -11.0326 37 1 1.7219 -2.2829 -12.8841 38 1 2.5758 -2.2344 -8.9135 39 1 0.7907 -2.4247 -8.6338 40 1 3.0579 -3.7955 -4.2175 41 1 2.3203 -5.7119 -2.8734 42 1 1.3418 -5.3722 -0.6442 43 1 1.0874 -3.1184 0.2669 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:11 Heat of formation + Delta-G solvation = -19.395486 kcal Electronic energy + Delta-G solvation = -26175.074916 eV Core-core repulsion = 22381.481050 eV Total energy + Delta-G solvation = -3793.593866 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.48243 -41.23261 -39.68610 -38.01504 -37.61192 -37.29994 -34.73701 -33.95196 -31.39366 -30.11939 -29.48264 -28.38836 -26.89524 -25.79156 -23.93207 -23.36098 -22.41492 -21.74633 -20.85733 -20.53729 -18.65520 -18.49342 -18.29474 -17.77528 -17.44257 -17.01230 -16.48661 -16.35508 -16.29014 -15.98802 -15.61613 -15.53553 -15.20040 -14.80747 -14.63363 -14.57248 -14.28083 -13.99672 -13.82523 -13.68255 -13.43667 -13.20009 -12.84153 -12.60336 -12.43786 -12.41870 -12.26144 -11.88984 -11.87253 -11.62112 -11.61861 -11.09330 -10.96085 -10.41192 -10.33909 -10.20564 -9.01626 -8.52436 -4.90718 0.28686 0.80643 1.36795 1.37430 1.44404 1.63362 1.71995 2.03339 2.12317 3.01349 3.12219 3.26876 3.42400 3.48221 3.52274 3.60567 3.67067 3.74380 3.81167 3.85017 3.86830 4.08684 4.22773 4.28889 4.32476 4.38319 4.42338 4.46847 4.58198 4.59908 4.65327 4.73226 4.81533 4.85641 4.91499 4.93442 5.00445 5.12098 5.26590 5.38100 5.65730 5.81892 5.87389 5.90975 6.15502 6.31877 6.37520 6.57924 6.62129 6.99567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.037 4.037 3 Si 0.683 3.317 4 C -0.193 4.193 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.491 3.509 9 O -0.514 6.514 10 N -0.719 5.719 11 C 0.123 3.877 12 H 0.117 0.883 13 C -0.138 4.138 14 C -0.109 4.109 15 H 0.103 0.897 16 C 0.087 3.913 17 O -0.573 6.573 18 C -0.143 4.143 19 C 0.109 3.891 20 C -0.128 4.128 21 C -0.096 4.096 22 C -0.146 4.146 23 C -0.065 4.065 24 C -0.086 4.086 25 H 0.374 0.626 26 H 0.114 0.886 27 H -0.261 1.261 28 H -0.257 1.257 29 H 0.168 0.832 30 H 0.123 0.877 31 H 0.118 0.882 32 H 0.402 0.598 33 H 0.080 0.920 34 H 0.089 0.911 35 H 0.048 0.952 36 H 0.047 0.953 37 H 0.381 0.619 38 H 0.085 0.915 39 H 0.075 0.925 40 H 0.114 0.886 41 H 0.125 0.875 42 H 0.123 0.877 43 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.086 2.118 -4.815 9.646 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.147 4.147 3 Si 0.584 3.416 4 C -0.201 4.201 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.275 3.725 9 O -0.387 6.387 10 N -0.371 5.371 11 C 0.018 3.982 12 H 0.135 0.865 13 C -0.176 4.176 14 C -0.128 4.128 15 H 0.121 0.879 16 C 0.009 3.991 17 O -0.379 6.379 18 C -0.182 4.182 19 C 0.005 3.995 20 C -0.148 4.148 21 C -0.116 4.116 22 C -0.165 4.165 23 C -0.084 4.084 24 C -0.090 4.090 25 H 0.222 0.778 26 H 0.132 0.868 27 H -0.186 1.186 28 H -0.181 1.181 29 H 0.185 0.815 30 H 0.141 0.859 31 H 0.136 0.864 32 H 0.237 0.763 33 H 0.099 0.901 34 H 0.108 0.892 35 H 0.066 0.934 36 H 0.065 0.935 37 H 0.229 0.771 38 H 0.104 0.896 39 H 0.094 0.906 40 H 0.132 0.868 41 H 0.143 0.857 42 H 0.141 0.859 43 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 6.834 2.690 -3.788 8.263 hybrid contribution -0.190 -0.142 -1.449 1.469 sum 6.644 2.548 -5.237 8.835 Atomic orbital electron populations 1.86593 1.18086 1.79937 1.49036 1.24293 0.83394 1.09755 0.97299 0.95358 0.91431 0.74515 0.80325 1.20584 1.09453 0.92357 0.97689 1.21578 1.01193 0.93938 0.89179 1.43197 1.53694 1.04654 1.13362 1.21603 0.94530 1.06012 0.81377 1.21078 0.90796 0.76971 0.83667 1.90812 1.19818 1.47076 1.81037 1.45949 1.10772 1.73531 1.06848 1.22542 0.93022 0.96929 0.85720 0.86521 1.23359 1.01557 0.98433 0.94230 1.22336 1.01255 0.96658 0.92520 0.87921 1.22134 0.93235 0.91979 0.91718 1.86502 1.49405 1.65051 1.36898 1.23518 1.02899 0.97085 0.94695 1.18166 1.01375 0.85826 0.94157 1.19951 1.05321 0.89286 1.00266 1.20826 0.98328 0.97947 0.94449 1.20672 1.02398 0.96959 0.96443 1.20309 0.97847 0.90914 0.99281 1.18939 1.03187 0.92784 0.94131 0.77833 0.86826 1.18618 1.18128 0.81453 0.85878 0.86376 0.76320 0.90100 0.89228 0.93360 0.93510 0.77150 0.89603 0.90610 0.86782 0.85737 0.85918 0.85904 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.86 12.88 -35.23 -0.45 -2.31 16 2 C -0.04 -0.06 3.06 36.01 0.11 0.05 16 3 Si 0.68 -0.23 30.82 -169.99 -5.24 -5.47 16 4 C -0.19 -0.50 5.58 -102.71 -0.57 -1.07 16 5 C 0.07 0.07 9.89 -16.73 -0.17 -0.09 16 6 N -0.47 -0.64 2.27 -115.71 -0.26 -0.91 16 7 C 0.09 -0.22 6.48 -5.19 -0.03 -0.25 16 8 C 0.49 0.13 7.90 -10.98 -0.09 0.05 16 9 O -0.51 -2.90 16.02 5.56 0.09 -2.81 16 10 N -0.72 1.83 5.35 -53.01 -0.28 1.55 16 11 C 0.12 -0.15 4.24 -67.12 -0.28 -0.43 16 12 H 0.12 0.13 7.46 -51.93 -0.39 -0.25 16 13 C -0.14 0.42 7.39 -25.92 -0.19 0.23 16 14 C -0.11 0.15 4.01 -89.81 -0.36 -0.21 16 15 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 16 C 0.09 -0.15 6.89 37.16 0.26 0.11 16 17 O -0.57 -0.11 13.66 -35.23 -0.48 -0.59 16 18 C -0.14 0.12 7.43 -25.92 -0.19 -0.07 16 19 C 0.11 0.39 6.80 -83.99 -0.57 -0.18 16 20 C -0.13 -0.35 10.00 -39.43 -0.39 -0.75 16 21 C -0.10 -0.23 10.01 -39.54 -0.40 -0.63 16 22 C -0.15 -0.41 9.97 -39.95 -0.40 -0.81 16 23 C -0.06 -0.25 10.05 -39.65 -0.40 -0.65 16 24 C -0.09 -0.37 6.35 -105.14 -0.67 -1.04 16 25 H 0.37 0.42 8.70 45.56 0.40 0.81 16 26 H 0.11 0.11 7.96 -51.93 -0.41 -0.30 16 27 H -0.26 -0.32 7.00 56.52 0.40 0.07 16 28 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 29 H 0.17 -0.27 6.27 -52.49 -0.33 -0.59 16 30 H 0.12 -0.72 8.12 -51.93 -0.42 -1.14 16 31 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 32 H 0.40 -2.37 8.73 -40.82 -0.36 -2.72 16 33 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 34 H 0.09 -0.42 8.08 -51.93 -0.42 -0.84 16 35 H 0.05 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.05 -0.13 7.85 -51.93 -0.41 -0.54 16 37 H 0.38 -1.53 9.12 45.56 0.42 -1.11 16 38 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 39 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 40 H 0.11 0.10 8.06 -52.49 -0.42 -0.32 16 41 H 0.12 0.03 8.06 -52.49 -0.42 -0.39 16 42 H 0.12 0.10 8.06 -52.48 -0.42 -0.32 16 43 H 0.12 0.35 8.06 -52.48 -0.42 -0.07 16 LS Contribution 364.28 15.07 5.49 5.49 Total: 0.00 -11.58 364.28 -10.83 -22.41 By element: Atomic # 1 Polarization: -6.27 SS G_CDS: -5.34 Total: -11.62 kcal Atomic # 6 Polarization: -1.39 SS G_CDS: -4.35 Total: -5.74 kcal Atomic # 7 Polarization: 1.19 SS G_CDS: -0.55 Total: 0.64 kcal Atomic # 8 Polarization: -4.87 SS G_CDS: -0.85 Total: -5.72 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: -5.24 Total: -5.47 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -11.58 -10.83 -22.41 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.018 kcal (2) G-P(sol) polarization free energy of solvation -11.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.565 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.414 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds