Wall clock time and date at job start Tue Mar 9 2021 12:59:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81395 * 1 3 3 C 1.81399 * 103.00067 * 2 1 4 4 H 1.08998 * 112.85134 * 43.80774 * 3 2 1 5 5 C 1.53781 * 113.61755 * 175.00140 * 3 2 1 6 6 C 1.53779 * 87.08095 * 139.98138 * 5 3 2 7 7 H 1.09000 * 113.61869 * 219.93298 * 6 5 3 8 8 N 1.46500 * 113.61319 * 89.11770 * 6 5 3 9 9 C 1.34785 * 119.99956 * 154.99703 * 8 6 5 10 10 O 1.21272 * 120.00006 * 0.02562 * 9 8 6 11 11 C 1.50702 * 119.99678 * 179.97438 * 9 8 6 12 12 N 1.46507 * 109.46822 * 180.02562 * 11 9 8 13 13 C 1.36837 * 125.06008 * 265.31519 * 12 11 9 14 14 C 1.34238 * 109.93192 * 180.13684 * 13 12 11 15 15 C 1.50693 * 126.49597 * 179.87185 * 14 13 12 16 16 O 1.42907 * 109.47661 * 104.68666 * 15 14 13 17 17 Si 1.86298 * 109.47618 * 344.68356 * 15 14 13 18 18 C 1.46492 * 107.00223 * 359.60333 * 14 13 12 19 19 C 1.39582 * 134.03159 * 180.24199 * 18 14 13 20 20 C 1.36663 * 119.76275 * 179.97438 * 19 18 14 21 21 C 1.38785 * 120.52708 * 0.04289 * 20 19 18 22 22 C 1.37785 * 120.66816 * 359.97173 * 21 20 19 23 23 C 1.37687 * 125.05923 * 84.99883 * 12 11 9 24 24 C 1.53771 * 87.08423 * 334.56825 * 6 5 3 25 25 H 1.08994 * 109.47580 * 59.99735 * 1 2 3 26 26 H 1.08998 * 109.46834 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46718 * 299.99792 * 1 2 3 28 28 H 1.09000 * 113.61311 * 25.43291 * 5 3 2 29 29 H 1.08997 * 113.69255 * 254.54247 * 5 3 2 30 30 H 0.96997 * 120.00106 * 335.00531 * 8 6 5 31 31 H 1.08996 * 109.47378 * 60.00375 * 11 9 8 32 32 H 1.08996 * 109.47337 * 299.99903 * 11 9 8 33 33 H 1.07998 * 125.03148 * 359.97438 * 13 12 11 34 34 H 1.09000 * 109.46936 * 224.68289 * 15 14 13 35 35 H 0.96697 * 114.00527 * 179.97438 * 16 15 14 36 36 H 1.48506 * 109.99834 * 298.68714 * 17 15 14 37 37 H 1.48502 * 110.00011 * 59.99978 * 17 15 14 38 38 H 1.08004 * 120.11997 * 359.97438 * 19 18 14 39 39 H 1.08003 * 119.73695 * 179.97438 * 20 19 18 40 40 H 1.08001 * 119.66747 * 180.02562 * 21 20 19 41 41 H 1.07999 * 120.11267 * 179.97438 * 22 21 20 42 42 H 1.09004 * 113.61393 * 139.97719 * 24 6 5 43 43 H 1.08999 * 113.61643 * 270.88061 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 6 2.2220 1.7675 0.0000 4 1 1.6110 2.3430 0.6953 5 6 3.7283 2.0520 0.1228 6 6 3.5205 3.1738 -0.9084 7 1 4.3243 3.2481 -1.6408 8 7 3.1761 4.4654 -0.3089 9 6 3.4493 5.6087 -0.9684 10 8 3.9799 5.5682 -2.0581 11 6 3.0945 6.9373 -0.3520 12 7 3.4901 8.0177 -1.2590 13 6 4.6742 8.7009 -1.1985 14 6 4.7189 9.6261 -2.1700 15 6 5.8481 10.5862 -2.4421 16 8 6.5757 10.1521 -3.5929 17 14 6.9881 10.6376 -0.9696 18 6 3.4647 9.5210 -2.9196 19 6 2.9335 10.1939 -4.0212 20 6 1.6993 9.8493 -4.4961 21 6 0.9689 8.8360 -3.8914 22 6 1.4740 8.1590 -2.8028 23 6 2.7284 8.4926 -2.3031 24 6 2.3008 2.3816 -1.4077 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 4.3572 1.2382 -0.2382 29 1 4.0270 2.4133 1.1068 30 1 2.7514 4.4979 0.5626 31 1 3.6186 7.0491 0.5972 32 1 2.0190 6.9828 -0.1807 33 1 5.4558 8.5238 -0.4745 34 1 5.4428 11.5818 -2.6228 35 1 7.3188 10.7247 -3.8275 36 1 6.2511 11.1180 0.2268 37 1 7.5473 9.2861 -0.7127 38 1 3.4959 10.9840 -4.4965 39 1 1.2885 10.3705 -5.3483 40 1 -0.0050 8.5748 -4.2785 41 1 0.8978 7.3722 -2.3389 42 1 1.4455 3.0091 -1.6587 43 1 2.5393 1.6580 -2.1871 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525166_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:34 Heat of formation + Delta-G solvation = 38.303702 kcal Electronic energy + Delta-G solvation = -25924.807912 eV Core-core repulsion = 22257.786750 eV Total energy + Delta-G solvation = -3667.021162 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.119 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.52667 -41.25290 -39.34766 -37.95220 -37.48629 -34.63073 -34.01214 -31.39951 -30.20466 -30.01537 -29.12728 -26.98707 -26.57838 -25.42594 -23.69729 -22.79864 -21.86686 -20.85034 -20.45482 -18.87800 -18.22669 -18.16169 -17.69556 -17.65301 -16.97949 -16.42694 -16.36122 -15.99407 -15.68738 -15.46240 -15.34747 -14.95302 -14.79194 -14.68311 -14.58795 -14.39338 -14.23301 -14.06458 -13.94341 -13.74873 -13.50247 -13.36455 -12.67132 -12.64390 -12.47880 -12.37812 -12.01341 -11.91744 -11.74839 -11.66176 -11.17510 -10.96362 -10.45711 -10.33918 -10.10872 -9.05427 -8.73800 -8.56561 -4.97862 0.24118 0.62340 0.76230 1.30552 1.31686 1.35642 1.47840 1.64050 1.73661 1.99943 2.01286 3.06968 3.14613 3.17693 3.35746 3.41131 3.56412 3.63999 3.70274 3.72721 3.77872 3.83205 4.07845 4.09071 4.12262 4.29378 4.29522 4.34173 4.43377 4.50288 4.54604 4.59416 4.67343 4.68058 4.71554 4.75521 4.81515 4.87707 4.96508 5.22602 5.29895 5.61736 5.77178 5.82649 5.86614 6.07524 6.25025 6.33298 6.82428 6.93303 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.249 6.249 3 C -0.085 4.085 4 H 0.103 0.897 5 C -0.115 4.115 6 C 0.124 3.876 7 H 0.112 0.888 8 N -0.713 5.713 9 C 0.493 3.507 10 O -0.506 6.506 11 C 0.092 3.908 12 N -0.466 5.466 13 C 0.064 3.936 14 C -0.150 4.150 15 C -0.033 4.033 16 O -0.545 6.545 17 Si 0.683 3.317 18 C -0.085 4.085 19 C -0.063 4.063 20 C -0.145 4.145 21 C -0.095 4.095 22 C -0.128 4.128 23 C 0.109 3.891 24 C -0.137 4.137 25 H 0.077 0.923 26 H 0.102 0.898 27 H 0.076 0.924 28 H 0.107 0.893 29 H 0.085 0.915 30 H 0.402 0.598 31 H 0.122 0.878 32 H 0.119 0.881 33 H 0.162 0.838 34 H 0.070 0.930 35 H 0.378 0.622 36 H -0.256 1.256 37 H -0.254 1.254 38 H 0.124 0.876 39 H 0.124 0.876 40 H 0.126 0.874 41 H 0.115 0.885 42 H 0.075 0.925 43 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.247 2.034 4.463 5.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.021 6.021 3 C -0.214 4.214 4 H 0.122 0.878 5 C -0.154 4.154 6 C 0.016 3.984 7 H 0.130 0.870 8 N -0.366 5.366 9 C 0.277 3.723 10 O -0.379 6.379 11 C -0.034 4.034 12 N -0.150 5.150 13 C -0.060 4.060 14 C -0.157 4.157 15 C -0.144 4.144 16 O -0.351 6.351 17 Si 0.584 3.416 18 C -0.089 4.089 19 C -0.081 4.081 20 C -0.164 4.164 21 C -0.115 4.115 22 C -0.148 4.148 23 C 0.005 3.995 24 C -0.178 4.178 25 H 0.096 0.904 26 H 0.121 0.879 27 H 0.095 0.905 28 H 0.125 0.875 29 H 0.103 0.897 30 H 0.236 0.764 31 H 0.140 0.860 32 H 0.137 0.863 33 H 0.180 0.820 34 H 0.088 0.912 35 H 0.225 0.775 36 H -0.181 1.181 37 H -0.179 1.179 38 H 0.142 0.858 39 H 0.142 0.858 40 H 0.144 0.856 41 H 0.133 0.867 42 H 0.094 0.906 43 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -0.555 0.084 4.734 4.767 hybrid contribution -1.724 0.618 0.424 1.880 sum -2.279 0.702 5.158 5.683 Atomic orbital electron populations 1.23380 0.94027 1.06741 1.04952 1.86990 1.07656 1.09834 1.97613 1.24793 1.00740 0.94742 1.01151 0.87845 1.23169 0.93721 0.98109 1.00439 1.21823 0.98519 0.81532 0.96493 0.87013 1.45633 1.63395 1.05017 1.22584 1.21023 0.79204 0.85811 0.86265 1.90837 1.40396 1.86903 1.19744 1.21577 1.04036 0.84336 0.93453 1.43156 1.15361 1.29681 1.26786 1.21412 0.88792 0.94357 1.01480 1.19540 0.95505 1.01753 0.98939 1.23941 0.95514 0.96858 0.98114 1.86575 1.47156 1.54493 1.46844 0.95260 0.84933 0.84711 0.76717 1.18932 0.94037 0.98266 0.97699 1.20288 0.95044 0.98713 0.94101 1.20675 0.95202 0.99238 1.01296 1.20828 0.99753 0.95840 0.95045 1.19941 0.93401 1.02319 0.99148 1.18165 0.94115 0.96735 0.90481 1.23769 0.99040 0.99277 0.95737 0.90377 0.87947 0.90505 0.87478 0.89683 0.76361 0.86016 0.86261 0.82046 0.91226 0.77543 1.18067 1.17891 0.85838 0.85772 0.85628 0.86744 0.90600 0.87562 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.18 10.76 101.05 1.09 1.27 16 2 S -0.25 -0.11 22.17 -107.50 -2.38 -2.49 16 3 C -0.09 0.15 4.15 -25.92 -0.11 0.05 16 4 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 5 C -0.12 0.25 7.42 -25.92 -0.19 0.05 16 6 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 7 H 0.11 0.13 7.46 -51.93 -0.39 -0.25 16 8 N -0.71 1.52 5.26 -53.02 -0.28 1.24 16 9 C 0.49 0.48 7.90 -10.98 -0.09 0.39 16 10 O -0.51 -3.25 16.02 5.56 0.09 -3.16 16 11 C 0.09 -0.12 6.48 -5.19 -0.03 -0.15 16 12 N -0.47 -1.40 2.27 -115.71 -0.26 -1.66 16 13 C 0.06 0.23 9.89 -16.73 -0.17 0.07 16 14 C -0.15 -0.69 5.61 -102.71 -0.58 -1.26 16 15 C -0.03 -0.06 3.05 36.00 0.11 0.05 16 16 O -0.55 -1.29 12.86 -35.23 -0.45 -1.74 16 17 Si 0.68 -0.28 30.80 -169.99 -5.24 -5.52 16 18 C -0.09 -0.47 6.35 -105.14 -0.67 -1.13 16 19 C -0.06 -0.26 10.05 -39.65 -0.40 -0.66 16 20 C -0.15 -0.42 9.97 -39.95 -0.40 -0.82 16 21 C -0.10 -0.25 10.01 -39.55 -0.40 -0.64 16 22 C -0.13 -0.41 10.00 -39.43 -0.39 -0.81 16 23 C 0.11 0.51 6.80 -83.99 -0.57 -0.06 16 24 C -0.14 0.16 7.47 -25.92 -0.19 -0.04 16 25 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 26 H 0.10 -0.19 8.14 -51.92 -0.42 -0.61 16 27 H 0.08 -0.17 8.14 -51.92 -0.42 -0.60 16 28 H 0.11 -0.17 8.10 -51.93 -0.42 -0.59 16 29 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 30 H 0.40 -2.12 8.70 -40.82 -0.36 -2.47 16 31 H 0.12 -0.54 8.12 -51.93 -0.42 -0.96 16 32 H 0.12 -0.46 8.14 -51.93 -0.42 -0.88 16 33 H 0.16 0.28 6.30 -52.49 -0.33 -0.05 16 34 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 35 H 0.38 -1.18 8.74 45.56 0.40 -0.78 16 36 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 37 H -0.25 -0.63 7.04 56.52 0.40 -0.23 16 38 H 0.12 0.32 8.06 -52.48 -0.42 -0.10 16 39 H 0.12 0.09 8.06 -52.48 -0.42 -0.34 16 40 H 0.13 0.03 8.06 -52.49 -0.42 -0.40 16 41 H 0.11 0.13 8.06 -52.49 -0.42 -0.29 16 42 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 43 H 0.11 -0.05 8.10 -51.93 -0.42 -0.47 16 LS Contribution 376.47 15.07 5.67 5.67 Total: 0.00 -11.36 376.47 -12.33 -23.69 By element: Atomic # 1 Polarization: -5.72 SS G_CDS: -6.20 Total: -11.92 kcal Atomic # 6 Polarization: -0.84 SS G_CDS: -3.27 Total: -4.11 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -0.54 Total: -0.42 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: -0.36 Total: -4.90 kcal Atomic # 14 Polarization: -0.28 SS G_CDS: -5.24 Total: -5.52 kcal Atomic # 16 Polarization: -0.11 SS G_CDS: -2.38 Total: -2.49 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -11.36 -12.33 -23.69 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.996 kcal (2) G-P(sol) polarization free energy of solvation -11.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.692 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.304 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds