Wall clock time and date at job start Tue Mar 9 2021 13:03:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86294 * 109.47322 * 2 1 4 4 C 1.50699 * 109.46699 * 119.99868 * 2 1 3 5 5 C 1.34238 * 126.49866 * 255.02140 * 4 2 1 6 6 N 1.36842 * 109.93808 * 179.97438 * 5 4 2 7 7 C 1.46497 * 125.06274 * 179.97438 * 6 5 4 8 8 C 1.50694 * 109.47115 * 265.02689 * 7 6 5 9 9 O 1.21283 * 120.00363 * 359.97438 * 8 7 6 10 10 N 1.34784 * 119.99988 * 180.02562 * 8 7 6 11 11 C 1.46493 * 119.99864 * 179.72721 * 10 8 7 12 12 H 1.08998 * 112.85495 * 25.32884 * 11 10 8 13 13 C 1.53787 * 113.61479 * 156.52932 * 11 10 8 14 14 C 1.53784 * 87.08067 * 89.11450 * 13 11 10 15 15 H 1.09005 * 113.60905 * 270.88268 * 14 13 11 16 16 S 1.81397 * 113.61525 * 140.06697 * 14 13 11 17 17 C 1.76194 * 103.00228 * 174.99623 * 16 14 13 18 18 C 1.38976 * 120.07851 * 359.72767 * 17 16 14 19 19 C 1.38083 * 119.91968 * 179.71522 * 18 17 16 20 20 C 1.38308 * 120.07657 * 0.58158 * 19 18 17 21 21 C 1.38297 * 120.16023 * 359.67503 * 20 19 18 22 22 C 1.38078 * 120.08230 * 0.04227 * 21 20 19 23 23 C 1.53782 * 113.61314 * 254.13138 * 11 10 8 24 24 C 1.37691 * 109.87212 * 0.23184 * 6 5 4 25 25 C 1.39089 * 133.50881 * 180.39539 * 24 6 5 26 26 C 1.37783 * 119.77645 * 179.64676 * 25 24 6 27 27 C 1.38789 * 120.67005 * 359.75601 * 26 25 24 28 28 C 1.36661 * 120.52465 * 359.97438 * 27 26 25 29 29 C 1.39584 * 119.76678 * 359.97438 * 28 27 26 30 30 H 0.96696 * 113.99704 * 300.00655 * 1 2 3 31 31 H 1.08992 * 109.47222 * 239.99678 * 2 1 3 32 32 H 1.48504 * 110.00155 * 299.99921 * 3 2 1 33 33 H 1.48498 * 110.00059 * 61.31471 * 3 2 1 34 34 H 1.07994 * 125.03450 * 359.97438 * 5 4 2 35 35 H 1.08998 * 109.46734 * 145.02806 * 7 6 5 36 36 H 1.09002 * 109.47081 * 25.02577 * 7 6 5 37 37 H 0.97000 * 119.99339 * 0.02562 * 10 8 7 38 38 H 1.08997 * 113.61123 * 203.66007 * 13 11 10 39 39 H 1.09002 * 113.61306 * 334.48185 * 13 11 10 40 40 H 1.07999 * 120.04128 * 0.02562 * 18 17 16 41 41 H 1.07998 * 119.96266 * 180.27431 * 19 18 17 42 42 H 1.07997 * 119.91252 * 179.69444 * 20 19 18 43 43 H 1.08003 * 119.95738 * 180.02562 * 21 20 19 44 44 H 1.08004 * 120.04199 * 180.02562 * 22 21 20 45 45 H 1.08999 * 113.61160 * 25.43919 * 23 11 10 46 46 H 1.09006 * 113.61519 * 156.33488 * 23 11 10 47 47 H 1.08003 * 120.10720 * 359.40151 * 25 24 6 48 48 H 1.08002 * 119.66210 * 179.72923 * 26 25 24 49 49 H 1.08000 * 119.73747 * 180.02562 * 27 26 25 50 50 H 1.08001 * 120.11135 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4603 -0.1375 2.3232 6 7 2.8019 -1.0989 3.2351 7 6 3.4066 -0.8402 4.5441 8 6 4.9048 -0.9625 4.4384 9 8 5.4171 -1.2390 3.3744 10 7 5.6756 -0.7657 5.5264 11 6 7.1316 -0.8904 5.4249 12 1 7.5030 -0.7065 4.4168 13 6 7.8937 -0.1157 6.5131 14 6 7.7918 -1.3840 7.3767 15 1 6.8888 -1.4260 7.9859 16 16 9.2973 -1.7414 8.3234 17 6 8.8298 -3.1298 9.3023 18 6 7.5452 -3.6507 9.2036 19 6 7.1841 -4.7425 9.9681 20 6 8.0954 -5.3101 10.8400 21 6 9.3730 -4.7910 10.9447 22 6 9.7429 -3.7031 10.1792 23 6 7.6854 -2.1767 6.0602 24 6 2.4978 -2.3459 2.7367 25 6 2.6283 -3.6361 3.2397 26 6 2.2151 -4.7107 2.4827 27 6 1.6644 -4.5194 1.2232 28 6 1.5219 -3.2601 0.7119 29 6 1.9328 -2.1570 1.4620 30 1 -0.3933 0.4418 0.7650 31 1 1.7924 -0.5138 -0.8899 32 1 1.5616 2.4679 -1.2085 33 1 1.5879 2.4585 1.2242 34 1 2.5963 0.9248 2.4620 35 1 3.0329 -1.5658 5.2666 36 1 3.1464 0.1662 4.8721 37 1 5.2657 -0.5456 6.3776 38 1 8.9153 0.1404 6.2323 39 1 7.3394 0.7330 6.9140 40 1 6.8317 -3.2053 8.5262 41 1 6.1874 -5.1507 9.8887 42 1 7.8087 -6.1609 11.4402 43 1 10.0822 -5.2371 11.6263 44 1 10.7410 -3.2985 10.2612 45 1 6.9627 -2.9918 6.0968 46 1 8.6503 -2.4831 5.6559 47 1 3.0556 -3.7952 4.2187 48 1 2.3213 -5.7120 2.8733 49 1 1.3453 -5.3725 0.6429 50 1 1.0922 -3.1189 -0.2689 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525224_9818708.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:52 Heat of formation + Delta-G solvation = 66.110781 kcal Electronic energy + Delta-G solvation = -33040.520965 eV Core-core repulsion = 28706.263427 eV Total energy + Delta-G solvation = -4334.257538 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.134 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.53737 -41.31175 -39.91733 -39.39779 -38.05315 -37.59013 -34.66644 -33.95734 -32.12563 -31.95846 -31.39311 -30.15663 -29.12294 -27.11814 -26.76656 -25.58476 -23.81234 -23.70334 -23.48303 -22.77539 -21.95058 -20.89449 -20.60713 -18.93808 -18.76010 -18.53529 -17.80694 -17.70099 -17.32636 -16.88128 -16.61523 -16.32891 -16.29828 -16.10157 -15.91913 -15.79459 -15.46344 -15.30033 -14.95942 -14.76876 -14.64658 -14.51714 -14.37776 -14.28980 -14.02015 -13.96228 -13.82378 -13.56934 -13.33753 -13.27678 -12.62614 -12.49079 -12.35665 -12.30930 -12.22632 -12.07101 -11.91046 -11.81288 -11.65236 -11.21969 -11.14832 -10.80490 -10.46074 -10.37600 -10.35544 -10.01939 -9.05729 -8.56941 -8.43128 -4.88369 0.18395 0.24550 0.33598 0.44686 0.76126 1.27112 1.28734 1.35485 1.37456 1.59952 1.66347 1.99529 2.01040 2.69029 3.04594 3.06922 3.08108 3.32364 3.40064 3.51318 3.56481 3.57935 3.69407 3.74946 3.81581 3.82617 3.90221 4.03070 4.09923 4.22507 4.28816 4.33567 4.37291 4.42037 4.44954 4.48127 4.52440 4.57037 4.66132 4.69633 4.69774 4.76421 4.78325 4.87471 4.94645 4.96784 5.21772 5.22528 5.24580 5.35837 5.49270 5.61713 5.77657 5.83172 5.86773 5.87127 6.05517 6.25131 6.32684 6.57579 6.90087 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.192 4.192 5 C 0.065 3.935 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.494 3.506 9 O -0.506 6.506 10 N -0.714 5.714 11 C 0.126 3.874 12 H 0.114 0.886 13 C -0.114 4.114 14 C -0.108 4.108 15 H 0.110 0.890 16 S -0.103 6.103 17 C -0.083 4.083 18 C -0.133 4.133 19 C -0.101 4.101 20 C -0.124 4.124 21 C -0.100 4.100 22 C -0.102 4.102 23 C -0.136 4.136 24 C 0.109 3.891 25 C -0.128 4.128 26 C -0.096 4.096 27 C -0.145 4.145 28 C -0.064 4.064 29 C -0.086 4.086 30 H 0.372 0.628 31 H 0.115 0.885 32 H -0.255 1.255 33 H -0.260 1.260 34 H 0.169 0.831 35 H 0.118 0.882 36 H 0.123 0.877 37 H 0.402 0.598 38 H 0.108 0.892 39 H 0.088 0.912 40 H 0.121 0.879 41 H 0.125 0.875 42 H 0.126 0.874 43 H 0.129 0.871 44 H 0.128 0.872 45 H 0.078 0.922 46 H 0.107 0.893 47 H 0.114 0.886 48 H 0.125 0.875 49 H 0.123 0.877 50 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.843 1.435 5.566 5.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.584 3.416 4 C -0.199 4.199 5 C -0.059 4.059 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.278 3.722 9 O -0.379 6.379 10 N -0.367 5.367 11 C 0.019 3.981 12 H 0.132 0.868 13 C -0.153 4.153 14 C -0.237 4.237 15 H 0.128 0.872 16 S 0.144 5.856 17 C -0.196 4.196 18 C -0.156 4.156 19 C -0.121 4.121 20 C -0.145 4.145 21 C -0.120 4.120 22 C -0.125 4.125 23 C -0.177 4.177 24 C 0.005 3.995 25 C -0.149 4.149 26 C -0.115 4.115 27 C -0.164 4.164 28 C -0.083 4.083 29 C -0.090 4.090 30 H 0.220 0.780 31 H 0.132 0.868 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.186 0.814 35 H 0.135 0.865 36 H 0.141 0.859 37 H 0.236 0.764 38 H 0.126 0.874 39 H 0.106 0.894 40 H 0.139 0.861 41 H 0.143 0.857 42 H 0.144 0.856 43 H 0.147 0.853 44 H 0.146 0.854 45 H 0.097 0.903 46 H 0.125 0.875 47 H 0.132 0.868 48 H 0.143 0.857 49 H 0.141 0.859 50 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 2.284 2.548 4.394 5.569 hybrid contribution -2.299 -0.861 1.451 2.852 sum -0.015 1.687 5.844 6.083 Atomic orbital electron populations 1.86609 1.18140 1.79957 1.48964 1.24285 0.83290 1.09836 0.97359 0.95028 0.91772 0.74449 0.80393 1.20590 1.09685 0.92351 0.97304 1.21583 1.00970 0.94004 0.89363 1.43196 1.52698 1.04676 1.14387 1.21571 0.90612 1.05879 0.85375 1.21024 0.89472 0.77320 0.84347 1.90829 1.74453 1.44947 1.27637 1.45643 1.06372 1.72537 1.12151 1.21794 0.79545 0.96083 1.00662 0.86824 1.23161 1.02497 0.95408 0.94278 1.25132 0.99163 1.01571 0.97832 0.87155 1.85575 1.19421 1.34076 1.46501 1.21745 0.97084 0.99923 1.00856 1.21141 0.94926 0.98172 1.01380 1.21097 0.99710 0.95498 0.95777 1.21249 0.93816 1.00385 0.99038 1.21155 0.96578 0.95631 0.98615 1.20813 0.99008 0.96677 0.96048 1.23815 1.03177 0.97333 0.93350 1.18167 1.01229 0.85806 0.94326 1.19940 1.05104 0.89273 1.00569 1.20828 0.98269 0.97927 0.94481 1.20678 1.02405 0.96970 0.96397 1.20314 0.97900 0.90902 0.99166 1.18937 1.03307 0.92777 0.93984 0.78040 0.86762 1.17999 1.18541 0.81438 0.86450 0.85920 0.76353 0.87364 0.89370 0.86101 0.85697 0.85625 0.85323 0.85446 0.90345 0.87495 0.86834 0.85737 0.85894 0.85876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.29 12.88 -35.23 -0.45 -1.75 16 2 C -0.04 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.20 30.82 -169.99 -5.24 -5.44 16 4 C -0.19 -0.41 5.57 -102.71 -0.57 -0.98 16 5 C 0.07 0.04 9.89 -16.73 -0.17 -0.12 16 6 N -0.47 -0.35 2.27 -115.71 -0.26 -0.62 16 7 C 0.09 -0.29 6.48 -5.20 -0.03 -0.32 16 8 C 0.49 -0.53 7.90 -10.98 -0.09 -0.62 16 9 O -0.51 -1.99 16.03 5.56 0.09 -1.90 16 10 N -0.71 2.73 5.26 -53.02 -0.28 2.45 16 11 C 0.13 -0.34 4.30 -67.12 -0.29 -0.63 16 12 H 0.11 -0.09 7.50 -51.93 -0.39 -0.48 16 13 C -0.11 0.42 7.41 -25.91 -0.19 0.23 16 14 C -0.11 0.30 2.90 -25.78 -0.07 0.22 16 15 H 0.11 -0.40 6.85 -51.93 -0.36 -0.76 16 16 S -0.10 0.00 21.73 -107.50 -2.34 -2.34 16 17 C -0.08 -0.09 6.11 -39.04 -0.24 -0.33 16 18 C -0.13 -0.02 9.32 -39.36 -0.37 -0.39 16 19 C -0.10 0.02 10.04 -39.61 -0.40 -0.38 16 20 C -0.12 0.01 10.04 -39.53 -0.40 -0.38 16 21 C -0.10 -0.02 10.04 -39.62 -0.40 -0.41 16 22 C -0.10 -0.10 9.79 -39.37 -0.39 -0.49 16 23 C -0.14 0.30 7.40 -25.78 -0.19 0.11 16 24 C 0.11 0.33 6.80 -83.99 -0.57 -0.24 16 25 C -0.13 -0.28 10.00 -39.43 -0.39 -0.68 16 26 C -0.10 -0.19 10.01 -39.54 -0.40 -0.58 16 27 C -0.15 -0.35 9.97 -39.95 -0.40 -0.75 16 28 C -0.06 -0.22 10.05 -39.65 -0.40 -0.62 16 29 C -0.09 -0.33 6.35 -105.14 -0.67 -1.00 16 30 H 0.37 -0.23 8.70 45.56 0.40 0.17 16 31 H 0.11 0.14 7.96 -51.93 -0.41 -0.28 16 32 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 33 H -0.26 -0.14 7.00 56.52 0.40 0.25 16 34 H 0.17 -0.34 6.27 -52.49 -0.33 -0.67 16 35 H 0.12 -0.60 8.14 -51.93 -0.42 -1.03 16 36 H 0.12 -0.77 8.12 -51.93 -0.42 -1.19 16 37 H 0.40 -2.70 8.70 -40.82 -0.36 -3.06 16 38 H 0.11 -0.37 8.10 -51.93 -0.42 -0.79 16 39 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 40 H 0.12 -0.19 5.64 -52.49 -0.30 -0.49 16 41 H 0.13 -0.26 8.06 -52.49 -0.42 -0.68 16 42 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 43 H 0.13 -0.22 8.06 -52.48 -0.42 -0.65 16 44 H 0.13 0.01 8.06 -52.48 -0.42 -0.42 16 45 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.11 -0.16 8.11 -51.93 -0.42 -0.58 16 47 H 0.11 0.03 8.06 -52.48 -0.42 -0.40 16 48 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 49 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 50 H 0.12 0.30 8.06 -52.49 -0.42 -0.12 16 LS Contribution 431.37 15.07 6.50 6.50 Total: 0.00 -10.38 431.37 -15.34 -25.73 By element: Atomic # 1 Polarization: -7.49 SS G_CDS: -6.86 Total: -14.35 kcal Atomic # 6 Polarization: -1.79 SS G_CDS: -6.50 Total: -8.29 kcal Atomic # 7 Polarization: 2.38 SS G_CDS: -0.54 Total: 1.84 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: -0.36 Total: -3.64 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.24 Total: -5.44 kcal Atomic # 16 Polarization: 0.00 SS G_CDS: -2.34 Total: -2.34 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -10.38 -15.34 -25.73 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525224_9818708.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.836 kcal (2) G-P(sol) polarization free energy of solvation -10.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -15.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.726 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.111 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds