Wall clock time and date at job start Tue Mar 9 2021 13:05:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47280 * 2 1 4 4 C 1.50700 * 109.47066 * 120.00550 * 2 1 3 5 5 C 1.38189 * 119.83671 * 255.01851 * 4 2 1 6 6 C 1.38317 * 120.14343 * 179.97438 * 5 4 2 7 7 F 1.35092 * 120.08447 * 180.02562 * 6 5 4 8 8 C 1.39808 * 119.82806 * 359.77459 * 6 5 4 9 9 C 1.47692 * 120.15446 * 180.26945 * 8 6 5 10 10 O 1.21571 * 120.00023 * 0.21238 * 9 8 6 11 11 N 1.34778 * 120.00049 * 180.20578 * 9 8 6 12 12 C 1.46503 * 119.99780 * 179.97438 * 11 9 8 13 13 H 1.09000 * 112.84902 * 23.81177 * 12 11 9 14 14 C 1.53789 * 113.61301 * 155.00301 * 12 11 9 15 15 C 1.53784 * 87.08099 * 89.11748 * 14 12 11 16 16 H 1.09004 * 113.61234 * 270.80322 * 15 14 12 17 17 S 1.81391 * 113.61460 * 139.98347 * 15 14 12 18 18 O 1.42100 * 110.54224 * 296.62250 * 17 15 14 19 19 O 1.42099 * 110.54523 * 73.37659 * 17 15 14 20 20 C 1.76207 * 104.45054 * 185.00185 * 17 15 14 21 21 C 1.38234 * 119.99483 * 269.72704 * 20 17 15 22 22 C 1.38241 * 119.99383 * 179.76429 * 21 20 17 23 23 C 1.38230 * 120.00187 * 0.48855 * 22 21 20 24 24 C 1.38236 * 119.99958 * 359.78153 * 23 22 21 25 25 C 1.38232 * 120.00147 * 89.99711 * 20 17 15 26 26 C 1.53780 * 113.61356 * 252.49921 * 12 11 9 27 27 C 1.39657 * 119.69339 * 0.48138 * 8 6 5 28 28 C 1.38072 * 119.84896 * 359.51146 * 27 8 6 29 29 F 1.35101 * 119.91643 * 180.25458 * 28 27 8 30 30 H 0.96698 * 113.99994 * 300.00195 * 1 2 3 31 31 H 1.09005 * 109.46933 * 240.00075 * 2 1 3 32 32 H 1.48495 * 110.00165 * 300.00219 * 3 2 1 33 33 H 1.48504 * 109.99427 * 61.31977 * 3 2 1 34 34 H 1.07993 * 119.92994 * 359.97438 * 5 4 2 35 35 H 0.96996 * 120.00067 * 0.02562 * 11 9 8 36 36 H 1.08997 * 113.61513 * 203.66736 * 14 12 11 37 37 H 1.08998 * 113.61043 * 334.56935 * 14 12 11 38 38 H 1.08001 * 120.00412 * 0.02562 * 21 20 17 39 39 H 1.07998 * 119.99798 * 180.25059 * 22 21 20 40 40 H 1.08002 * 119.99727 * 179.76983 * 23 22 21 41 41 H 1.08000 * 119.99908 * 179.97438 * 24 23 22 42 42 H 1.08001 * 120.00082 * 0.02562 * 25 20 17 43 43 H 1.08996 * 113.61956 * 25.43350 * 26 12 11 44 44 H 1.09003 * 113.61296 * 156.34337 * 26 12 11 45 45 H 1.08002 * 120.07918 * 179.79826 * 27 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4527 0.0197 2.2814 6 6 2.9150 -0.6258 3.4139 7 9 3.4239 0.0893 4.4408 8 6 2.8494 -2.0200 3.4952 9 6 3.3356 -2.7164 4.7035 10 8 3.7905 -2.0769 5.6320 11 7 3.2747 -4.0608 4.7770 12 6 3.7575 -4.7515 5.9754 13 1 3.7496 -4.1170 6.8616 14 6 3.1076 -6.1275 6.1971 15 6 4.2405 -6.7136 5.3381 16 1 4.0129 -6.7373 4.2724 17 16 4.8787 -8.2945 5.9575 18 8 5.4674 -8.1266 7.2398 19 8 3.9481 -9.3394 5.7097 20 6 6.2389 -8.6642 4.9001 21 6 6.0381 -9.4009 3.7478 22 6 7.1044 -9.6868 2.9157 23 6 8.3730 -9.2447 3.2411 24 6 8.5746 -8.5128 4.3963 25 6 7.5075 -8.2224 5.2257 26 6 5.0840 -5.4998 5.7627 27 6 2.3262 -2.7515 2.4268 28 6 1.8682 -2.0937 1.3025 29 9 1.3570 -2.7997 0.2702 30 1 -0.3933 0.4417 0.7650 31 1 1.7923 -0.5139 -0.8900 32 1 1.5616 2.4679 -1.2084 33 1 1.5879 2.4584 1.2243 34 1 2.4992 1.0968 2.2183 35 1 2.9120 -4.5710 4.0361 36 1 3.1305 -6.4591 7.2352 37 1 2.1213 -6.2228 5.7430 38 1 5.0475 -9.7495 3.4954 39 1 6.9469 -10.2589 2.0133 40 1 9.2066 -9.4713 2.5929 41 1 9.5659 -8.1677 4.6508 42 1 7.6652 -7.6509 6.1285 43 1 5.6933 -5.0885 4.9580 44 1 5.6473 -5.6598 6.6821 45 1 2.2756 -3.8289 2.4816 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12550010_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:50 Heat of formation + Delta-G solvation = -120.941541 kcal Electronic energy + Delta-G solvation = -36090.613982 eV Core-core repulsion = 30804.926341 eV Total energy + Delta-G solvation = -5285.687641 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.088 amu Computer time = 2.52 seconds Orbital eigenvalues (eV) -50.17919 -50.07848 -41.76603 -40.52485 -40.17067 -39.35541 -38.14892 -37.86106 -36.99613 -34.89101 -33.20715 -32.43074 -32.12772 -31.50662 -28.34557 -27.29839 -26.87889 -24.56940 -24.34939 -23.97633 -23.83443 -22.23711 -21.28631 -20.00967 -19.93327 -19.16679 -18.90359 -18.67324 -18.23012 -17.92998 -17.40865 -17.21217 -17.07989 -17.01936 -16.88110 -16.61102 -16.37759 -16.11301 -16.00341 -15.93360 -15.71054 -15.64569 -15.55020 -15.20950 -14.69267 -14.63836 -14.37601 -14.24723 -14.16948 -14.03351 -13.94425 -13.85408 -13.33278 -13.29862 -13.14050 -13.07505 -13.03264 -12.54200 -12.37020 -12.36385 -12.23617 -12.01568 -11.84882 -11.36586 -11.26808 -10.92889 -10.74348 -10.48898 -10.41760 -10.15140 -9.92228 -5.17496 -1.06749 -0.94305 -0.45023 -0.26591 0.18796 0.96589 1.27670 1.36036 1.59794 1.71736 1.75560 2.12036 2.31549 2.57897 2.66145 2.70207 2.73634 2.91984 2.94203 3.04009 3.22817 3.26790 3.30029 3.36257 3.51012 3.59526 3.73287 3.79648 3.89893 3.94966 4.15738 4.17344 4.19053 4.21359 4.21460 4.26824 4.34204 4.37248 4.44210 4.53229 4.55739 4.57135 4.59187 4.64934 4.80939 4.95819 5.12829 5.14423 5.25560 5.26423 5.71700 6.07691 6.12585 6.83961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.080 4.080 3 Si 0.696 3.304 4 C -0.096 4.096 5 C -0.139 4.139 6 C 0.162 3.838 7 F -0.104 7.104 8 C -0.142 4.142 9 C 0.564 3.436 10 O -0.507 6.507 11 N -0.708 5.708 12 C 0.135 3.865 13 H 0.122 0.878 14 C -0.118 4.118 15 C -0.606 4.606 16 H 0.155 0.845 17 S 2.500 3.500 18 O -0.929 6.929 19 O -0.934 6.934 20 C -0.659 4.659 21 C -0.026 4.026 22 C -0.140 4.140 23 C -0.064 4.064 24 C -0.140 4.140 25 C -0.023 4.023 26 C -0.123 4.123 27 C -0.094 4.094 28 C 0.112 3.888 29 F -0.120 7.120 30 H 0.378 0.622 31 H 0.128 0.872 32 H -0.248 1.248 33 H -0.254 1.254 34 H 0.159 0.841 35 H 0.402 0.598 36 H 0.113 0.887 37 H 0.099 0.901 38 H 0.141 0.859 39 H 0.134 0.866 40 H 0.132 0.868 41 H 0.134 0.866 42 H 0.142 0.858 43 H 0.094 0.906 44 H 0.117 0.883 45 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.163 1.264 -4.746 5.366 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.189 4.189 3 Si 0.596 3.404 4 C -0.097 4.097 5 C -0.157 4.157 6 C 0.141 3.859 7 F -0.081 7.081 8 C -0.146 4.146 9 C 0.351 3.649 10 O -0.381 6.381 11 N -0.360 5.360 12 C 0.029 3.971 13 H 0.139 0.861 14 C -0.157 4.157 15 C -0.715 4.715 16 H 0.173 0.827 17 S 2.681 3.319 18 O -0.926 6.926 19 O -0.931 6.931 20 C -0.745 4.745 21 C -0.045 4.045 22 C -0.159 4.159 23 C -0.082 4.082 24 C -0.158 4.158 25 C -0.041 4.041 26 C -0.163 4.163 27 C -0.114 4.114 28 C 0.092 3.908 29 F -0.098 7.098 30 H 0.226 0.774 31 H 0.145 0.855 32 H -0.173 1.173 33 H -0.178 1.178 34 H 0.176 0.824 35 H 0.238 0.762 36 H 0.131 0.869 37 H 0.118 0.882 38 H 0.159 0.841 39 H 0.152 0.848 40 H 0.150 0.850 41 H 0.152 0.848 42 H 0.160 0.840 43 H 0.112 0.888 44 H 0.136 0.864 45 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.078 1.737 -3.934 4.777 hybrid contribution -0.774 -0.434 -0.800 1.195 sum 1.303 1.303 -4.734 5.080 Atomic orbital electron populations 1.86694 1.16641 1.79930 1.49282 1.25122 0.84732 1.11788 0.97284 0.94752 0.91296 0.73383 0.80970 1.20446 0.99197 0.92618 0.97466 1.21090 1.00821 1.01875 0.91946 1.17479 0.95106 0.87908 0.85417 1.91661 1.83336 1.77107 1.56035 1.19814 1.05970 0.92565 0.96301 1.17813 0.78719 0.82090 0.86301 1.90911 1.43869 1.65624 1.37741 1.45494 1.64558 1.06156 1.19840 1.21706 0.93362 0.92771 0.89287 0.86055 1.23100 0.97284 0.94897 1.00432 1.31804 1.09220 1.18682 1.11787 0.82714 1.05386 0.74825 0.76507 0.75185 1.93594 1.76528 1.86462 1.36019 1.93587 1.62453 1.51448 1.85593 1.30498 1.15669 1.14174 1.14208 1.20992 1.00301 0.92178 0.91028 1.21363 0.92919 1.01140 1.00462 1.21579 0.97397 0.93475 0.95793 1.21374 0.99536 0.99761 0.95172 1.20991 0.90955 0.94338 0.97863 1.23250 0.97076 0.91896 1.04061 1.21171 0.97831 1.01042 0.91339 1.17211 0.98834 0.88850 0.85896 1.91591 1.84208 1.77996 1.56024 0.77370 0.85467 1.17259 1.17850 0.82356 0.76192 0.86878 0.88198 0.84127 0.84832 0.85017 0.84793 0.84042 0.88758 0.86444 0.83144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 33. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.23 12.88 -35.23 -0.45 -0.23 16 2 C -0.08 0.17 2.44 36.01 0.09 0.25 16 3 Si 0.70 -2.05 30.24 -169.99 -5.14 -7.19 16 4 C -0.10 0.19 5.27 -104.49 -0.55 -0.36 16 5 C -0.14 0.27 8.62 -39.57 -0.34 -0.07 16 6 C 0.16 0.00 7.28 -38.97 -0.28 -0.28 16 7 F -0.10 -0.26 15.55 2.25 0.04 -0.23 16 8 C -0.14 0.12 5.88 -104.92 -0.62 -0.50 16 9 C 0.56 0.22 7.77 -12.40 -0.10 0.12 16 10 O -0.51 -2.20 14.94 5.30 0.08 -2.12 16 11 N -0.71 1.96 5.21 -54.00 -0.28 1.68 16 12 C 0.14 -0.35 4.32 -67.11 -0.29 -0.64 16 13 H 0.12 -0.17 7.46 -51.93 -0.39 -0.55 16 14 C -0.12 0.45 7.42 -25.91 -0.19 0.25 16 15 C -0.61 2.26 4.19 -25.92 -0.11 2.15 16 16 H 0.15 -0.97 8.14 -51.93 -0.42 -1.39 16 17 S 2.50 -0.19 5.09 -107.50 -0.55 -0.73 16 18 O -0.93 -2.46 16.44 -57.54 -0.95 -3.40 16 19 O -0.93 -2.95 17.12 -57.54 -0.98 -3.94 16 20 C -0.66 -0.04 5.66 -39.58 -0.22 -0.26 16 21 C -0.03 0.01 9.47 -39.58 -0.37 -0.37 16 22 C -0.14 0.14 10.05 -39.58 -0.40 -0.26 16 23 C -0.06 0.08 10.05 -39.58 -0.40 -0.32 16 24 C -0.14 0.13 10.05 -39.58 -0.40 -0.26 16 25 C -0.02 0.01 9.47 -39.59 -0.37 -0.37 16 26 C -0.12 0.40 7.44 -25.92 -0.19 0.21 16 27 C -0.09 0.26 9.51 -39.11 -0.37 -0.11 16 28 C 0.11 -0.16 7.23 -39.49 -0.29 -0.45 16 29 F -0.12 -0.01 16.73 2.25 0.04 0.03 16 30 H 0.38 -1.36 8.70 45.56 0.40 -0.97 16 31 H 0.13 -0.32 7.89 -51.93 -0.41 -0.73 16 32 H -0.25 -0.11 7.11 56.52 0.40 0.30 16 33 H -0.25 0.37 6.68 56.52 0.38 0.75 16 34 H 0.16 -0.52 4.83 -52.49 -0.25 -0.78 16 35 H 0.40 -2.23 6.73 -40.82 -0.27 -2.51 16 36 H 0.11 -0.48 8.10 -51.93 -0.42 -0.90 16 37 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 38 H 0.14 -0.22 7.57 -52.49 -0.40 -0.62 16 39 H 0.13 -0.40 8.06 -52.49 -0.42 -0.83 16 40 H 0.13 -0.45 8.06 -52.49 -0.42 -0.88 16 41 H 0.13 -0.39 8.06 -52.49 -0.42 -0.82 16 42 H 0.14 -0.23 7.57 -52.49 -0.40 -0.63 16 43 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 44 H 0.12 -0.40 7.53 -51.93 -0.39 -0.79 16 45 H 0.15 -0.85 6.41 -52.49 -0.34 -1.19 16 LS Contribution 401.49 15.07 6.05 6.05 Total: 0.00 -13.39 401.49 -12.19 -25.58 By element: Atomic # 1 Polarization: -9.59 SS G_CDS: -4.63 Total: -14.22 kcal Atomic # 6 Polarization: 4.14 SS G_CDS: -5.41 Total: -1.27 kcal Atomic # 7 Polarization: 1.96 SS G_CDS: -0.28 Total: 1.68 kcal Atomic # 8 Polarization: -7.39 SS G_CDS: -2.31 Total: -9.69 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.07 Total: -0.20 kcal Atomic # 14 Polarization: -2.05 SS G_CDS: -5.14 Total: -7.19 kcal Atomic # 16 Polarization: -0.19 SS G_CDS: -0.55 Total: -0.73 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -13.39 -12.19 -25.58 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12550010_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.366 kcal (2) G-P(sol) polarization free energy of solvation -13.386 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.576 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.942 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.52 seconds