Wall clock time and date at job start Tue Mar 9 2021 12:53:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47141 * 2 1 4 4 C 1.50696 * 109.47050 * 239.99954 * 2 1 3 5 5 C 1.38247 * 119.94295 * 300.00218 * 4 2 1 6 6 C 1.38165 * 120.05332 * 179.97438 * 5 4 2 7 7 N 1.48006 * 120.02841 * 180.02562 * 6 5 4 8 8 O 1.21794 * 119.99942 * 359.97438 * 7 6 5 9 9 O 1.21801 * 119.99880 * 179.97438 * 7 6 5 10 10 C 1.38715 * 119.94424 * 0.02562 * 6 5 4 11 11 O 1.35903 * 120.05514 * 179.72952 * 10 6 5 12 12 C 1.42895 * 117.00049 * 179.97438 * 11 10 6 13 13 C 1.50700 * 109.47241 * 179.97438 * 12 11 10 14 14 O 1.21275 * 120.00072 * 359.97438 * 13 12 11 15 15 N 1.34777 * 120.00079 * 180.02562 * 13 12 11 16 16 C 1.46500 * 119.99928 * 179.97438 * 15 13 12 17 17 H 1.08993 * 112.85075 * 23.80307 * 16 15 13 18 18 C 1.53782 * 113.61204 * 154.99407 * 16 15 13 19 19 C 1.53791 * 87.08064 * 89.11914 * 18 16 15 20 20 H 1.08997 * 113.61131 * 270.80355 * 19 18 16 21 21 C 1.50697 * 113.61761 * 139.97863 * 19 18 16 22 22 O 1.20822 * 119.99807 * 0.02562 * 21 19 18 23 23 O 1.34224 * 119.99923 * 179.97438 * 21 19 18 24 24 C 1.45199 * 116.99855 * 180.02562 * 23 21 19 25 25 C 1.50702 * 109.47151 * 180.02562 * 24 23 21 26 26 C 1.38233 * 119.99969 * 269.72838 * 25 24 23 27 27 C 1.38234 * 119.99812 * 179.74787 * 26 25 24 28 28 C 1.38232 * 120.00071 * 0.54338 * 27 26 25 29 29 C 1.38240 * 119.99964 * 359.70934 * 28 27 26 30 30 C 1.38232 * 119.99772 * 90.00273 * 25 24 23 31 31 C 1.53781 * 87.07928 * 25.43034 * 19 18 16 32 32 C 1.38748 * 119.88893 * 359.97438 * 10 6 5 33 33 C 1.38123 * 119.94318 * 359.96607 * 32 10 6 34 34 H 0.96695 * 114.00058 * 59.99810 * 1 2 3 35 35 H 1.09001 * 109.47008 * 119.99914 * 2 1 3 36 36 H 1.48495 * 110.00053 * 298.67950 * 3 2 1 37 37 H 1.48502 * 109.99998 * 60.00188 * 3 2 1 38 38 H 1.07992 * 119.97779 * 359.97438 * 5 4 2 39 39 H 1.09000 * 109.47202 * 299.99846 * 12 11 10 40 40 H 1.08999 * 109.47281 * 59.99918 * 12 11 10 41 41 H 0.96994 * 120.00005 * 359.97438 * 15 13 12 42 42 H 1.08997 * 113.61450 * 203.66043 * 18 16 15 43 43 H 1.08995 * 113.61734 * 334.57126 * 18 16 15 44 44 H 1.09005 * 109.47389 * 300.00310 * 24 23 21 45 45 H 1.09008 * 109.47409 * 59.99893 * 24 23 21 46 46 H 1.07999 * 120.00072 * 359.97438 * 26 25 24 47 47 H 1.08007 * 120.00061 * 180.27555 * 27 26 25 48 48 H 1.08004 * 120.00482 * 179.72651 * 28 27 26 49 49 H 1.08001 * 119.99869 * 179.97438 * 29 28 27 50 50 H 1.07998 * 120.00529 * 359.97438 * 30 25 24 51 51 H 1.09001 * 113.61591 * 220.01847 * 31 19 18 52 52 H 1.09004 * 113.61375 * 89.12108 * 31 19 18 53 53 H 1.08008 * 120.02910 * 179.97438 * 32 10 6 54 54 H 1.08004 * 119.96689 * 180.02562 * 33 32 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5965 -2.0340 -1.4480 6 6 2.0554 -2.6874 -2.5756 7 7 1.6962 -4.1042 -2.8084 8 8 0.9963 -4.6948 -2.0054 9 8 2.1006 -4.6795 -3.8028 10 6 2.8530 -2.0143 -3.4895 11 8 3.3101 -2.6564 -4.5966 12 6 4.1258 -1.9010 -5.4943 13 6 4.5362 -2.7717 -6.6538 14 8 4.1669 -3.9257 -6.7060 15 7 5.3145 -2.2683 -7.6322 16 6 5.7139 -3.1150 -8.7591 17 1 5.0302 -3.9473 -8.9263 18 6 6.0461 -2.3247 -10.0358 19 6 7.4911 -2.2440 -9.5155 20 1 7.6801 -1.3753 -8.8849 21 6 8.5311 -2.4240 -10.5911 22 8 8.1907 -2.6102 -11.7354 23 8 9.8354 -2.3763 -10.2782 24 6 10.7811 -2.5572 -11.3650 25 6 12.1864 -2.4736 -10.8273 26 6 12.8367 -1.2548 -10.7793 27 6 14.1239 -1.1773 -10.2812 28 6 14.7649 -2.3204 -9.8415 29 6 14.1164 -3.5401 -9.8944 30 6 12.8272 -3.6167 -10.3873 31 6 7.1945 -3.5289 -8.7243 32 6 3.1875 -0.6860 -3.2687 33 6 2.7252 -0.0369 -2.1405 34 1 -0.3933 0.4417 -0.7650 35 1 1.7923 -0.5138 0.8900 36 1 1.5879 2.4585 -1.2242 37 1 1.5615 2.4679 1.2085 38 1 0.9759 -2.5577 -0.7361 39 1 3.5621 -1.0446 -5.8642 40 1 5.0154 -1.5515 -4.9702 41 1 5.6102 -1.3455 -7.5903 42 1 5.9434 -2.9091 -10.9502 43 1 5.5478 -1.3570 -10.0925 44 1 10.6254 -3.5338 -11.8235 45 1 10.6303 -1.7773 -12.1115 46 1 12.3379 -0.3624 -11.1275 47 1 14.6304 -0.2243 -10.2395 48 1 15.7721 -2.2606 -9.4565 49 1 14.6174 -4.4333 -9.5513 50 1 12.3207 -4.5696 -10.4286 51 1 7.6232 -3.5333 -7.7221 52 1 7.4057 -4.4425 -9.2801 53 1 3.8087 -0.1599 -3.9786 54 1 2.9851 0.9972 -1.9685 There are 81 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 81 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12636046_4549638.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:11 Heat of formation + Delta-G solvation = -91.811113 kcal Electronic energy + Delta-G solvation = -41546.588566 eV Core-core repulsion = 35806.683573 eV Total energy + Delta-G solvation = -5739.904992 eV No. of doubly occupied orbitals = 81 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 443.160 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -43.27499 -42.12595 -41.70623 -40.92269 -40.16876 -39.65483 -38.88124 -37.60856 -37.50508 -37.41450 -34.52695 -33.45134 -33.18997 -32.24046 -31.87350 -30.10639 -28.41194 -27.80476 -26.87447 -26.81525 -26.41313 -24.17641 -23.56875 -22.98766 -22.70667 -22.20822 -21.96387 -20.56728 -20.41968 -19.75953 -19.13662 -19.06707 -18.61885 -18.43422 -18.27761 -18.08405 -17.61014 -17.53349 -17.39497 -17.04897 -16.86778 -16.35596 -16.19279 -16.07827 -16.02080 -15.74559 -15.66787 -15.40573 -14.97318 -14.76395 -14.64252 -14.37884 -14.17528 -14.02885 -13.95161 -13.88325 -13.69448 -13.62693 -13.44404 -13.34407 -13.20082 -12.94841 -12.69048 -12.37525 -12.34335 -12.25923 -12.19482 -12.15248 -12.10843 -11.84423 -11.80212 -11.75949 -11.70982 -11.40096 -11.04249 -10.81737 -10.74262 -10.21364 -9.89971 -9.86466 -9.77752 -4.90801 -1.29590 -0.22106 0.15923 0.17631 0.37416 0.42604 1.06840 1.20116 1.27816 1.45180 1.61660 1.71771 2.03673 2.06939 2.29565 2.84546 3.13118 3.22354 3.26103 3.32736 3.36242 3.46752 3.54222 3.60644 3.68841 3.73578 3.75313 3.78559 3.79434 3.96637 4.01871 4.06677 4.10413 4.18121 4.23295 4.31213 4.33105 4.41417 4.50094 4.55542 4.57488 4.64688 4.66140 4.66431 4.70466 4.81716 4.86346 4.89922 4.97097 5.00373 5.07822 5.09627 5.21197 5.32890 5.45491 5.48788 5.53062 5.55924 5.78325 6.00792 6.42972 6.44861 6.45877 6.64656 7.16368 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.092 4.092 3 Si 0.790 3.210 4 C -0.148 4.148 5 C -0.004 4.004 6 C -0.105 4.105 7 N 0.035 4.965 8 O -0.207 6.207 9 O -0.172 6.172 10 C 0.195 3.805 11 O -0.292 6.292 12 C 0.024 3.976 13 C 0.512 3.488 14 O -0.563 6.563 15 N -0.689 5.689 16 C 0.124 3.876 17 H 0.090 0.910 18 C -0.115 4.115 19 C -0.101 4.101 20 H 0.160 0.840 21 C 0.469 3.531 22 O -0.537 6.537 23 O -0.353 6.353 24 C 0.108 3.892 25 C -0.112 4.112 26 C -0.106 4.106 27 C -0.130 4.130 28 C -0.116 4.116 29 C -0.132 4.132 30 C -0.109 4.109 31 C -0.131 4.131 32 C -0.187 4.187 33 C -0.005 4.005 34 H 0.389 0.611 35 H 0.126 0.874 36 H -0.260 1.260 37 H -0.310 1.310 38 H 0.149 0.851 39 H 0.146 0.854 40 H 0.150 0.850 41 H 0.426 0.574 42 H 0.095 0.905 43 H 0.109 0.891 44 H 0.077 0.923 45 H 0.082 0.918 46 H 0.136 0.864 47 H 0.144 0.856 48 H 0.143 0.857 49 H 0.140 0.860 50 H 0.130 0.870 51 H 0.094 0.906 52 H 0.087 0.913 53 H 0.209 0.791 54 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.993 14.862 0.806 17.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.198 4.198 3 Si 0.693 3.307 4 C -0.149 4.149 5 C -0.023 4.023 6 C -0.191 4.191 7 N 0.544 4.456 8 O -0.413 6.413 9 O -0.387 6.387 10 C 0.145 3.855 11 O -0.202 6.202 12 C -0.053 4.053 13 C 0.298 3.702 14 O -0.440 6.440 15 N -0.344 5.344 16 C 0.018 3.982 17 H 0.108 0.892 18 C -0.153 4.153 19 C -0.119 4.119 20 H 0.178 0.822 21 C 0.313 3.687 22 O -0.426 6.426 23 O -0.269 6.269 24 C 0.035 3.965 25 C -0.113 4.113 26 C -0.124 4.124 27 C -0.147 4.147 28 C -0.134 4.134 29 C -0.150 4.150 30 C -0.127 4.127 31 C -0.170 4.170 32 C -0.206 4.206 33 C -0.022 4.022 34 H 0.238 0.762 35 H 0.144 0.856 36 H -0.186 1.186 37 H -0.239 1.239 38 H 0.166 0.834 39 H 0.164 0.836 40 H 0.167 0.833 41 H 0.265 0.735 42 H 0.114 0.886 43 H 0.128 0.872 44 H 0.095 0.905 45 H 0.101 0.899 46 H 0.154 0.846 47 H 0.162 0.838 48 H 0.161 0.839 49 H 0.158 0.842 50 H 0.148 0.852 51 H 0.112 0.888 52 H 0.106 0.894 53 H 0.226 0.774 54 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges 8.654 14.896 0.989 17.256 hybrid contribution -1.274 -1.134 -0.805 1.886 sum 7.379 13.762 0.184 15.617 Atomic orbital electron populations 1.86633 1.18550 1.80457 1.50336 1.25525 0.83578 1.13121 0.97617 0.94185 0.89235 0.69886 0.77425 1.20370 1.02171 0.92547 0.99840 1.20830 0.94196 0.94811 0.92507 1.20873 1.13544 0.81470 1.03174 1.43911 0.98192 1.04025 0.99430 1.94506 1.36211 1.68384 1.42206 1.94675 1.56292 1.69401 1.18286 1.18958 0.89538 0.92059 0.84904 1.86468 1.63614 1.39659 1.30502 1.23147 0.98405 0.94341 0.89373 1.20535 0.78128 0.87692 0.83845 1.90866 1.55174 1.20231 1.77721 1.45233 1.51430 1.16267 1.21477 1.21655 0.95601 0.94673 0.86276 0.89230 1.23288 0.91921 1.03059 0.97061 1.22831 0.90812 1.03086 0.95211 0.82243 1.24201 0.82912 0.71572 0.89966 1.90685 1.82209 1.46105 1.23647 1.86594 1.16848 1.82304 1.41199 1.21859 0.84153 1.03051 0.87449 1.19569 0.94005 0.94709 1.02970 1.21317 0.95488 0.97106 0.98448 1.21489 0.94899 0.99766 0.98584 1.21607 1.00924 0.92614 0.98244 1.21469 0.94837 0.99036 0.99621 1.21302 0.95610 0.98341 0.97486 1.23367 0.96001 0.96128 1.01458 1.21831 1.06049 0.90371 1.02311 1.21727 0.89349 1.01302 0.89811 0.76159 0.85578 1.18603 1.23881 0.83369 0.83644 0.83287 0.73505 0.88642 0.87235 0.90514 0.89933 0.84637 0.83807 0.83947 0.84185 0.85231 0.88771 0.89441 0.77411 0.79410 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.03 12.77 -148.98 -1.90 -0.87 16 2 C -0.09 0.64 2.82 71.23 0.20 0.84 16 3 Si 0.79 -8.54 29.78 68.60 2.04 -6.49 16 4 C -0.15 1.00 5.39 -19.85 -0.11 0.89 16 5 C 0.00 0.00 9.11 22.25 0.20 0.20 16 6 C -0.11 -0.63 6.87 36.47 0.25 -0.37 16 7 N 0.03 0.56 4.45 -46.24 -0.21 0.35 16 8 O -0.21 -3.79 18.45 18.89 0.35 -3.44 16 9 O -0.17 -3.59 17.24 25.61 0.44 -3.15 16 10 C 0.20 -0.22 6.67 22.51 0.15 -0.07 16 11 O -0.29 -0.71 7.68 -63.43 -0.49 -1.20 16 12 C 0.02 -0.24 5.22 71.24 0.37 0.13 16 13 C 0.51 -0.94 7.91 87.66 0.69 -0.24 16 14 O -0.56 -7.11 16.10 16.02 0.26 -6.85 16 15 N -0.69 6.56 5.26 -440.05 -2.32 4.24 16 16 C 0.12 -0.59 4.32 45.52 0.20 -0.39 16 17 H 0.09 0.14 7.46 -2.39 -0.02 0.12 16 18 C -0.12 0.78 7.15 31.12 0.22 1.00 16 19 C -0.10 0.70 4.14 -11.01 -0.05 0.65 16 20 H 0.16 -2.21 8.14 -2.39 -0.02 -2.23 16 21 C 0.47 0.52 7.48 71.23 0.53 1.05 16 22 O -0.54 -4.12 15.65 21.98 0.34 -3.77 16 23 O -0.35 -0.63 10.20 -51.36 -0.52 -1.15 16 24 C 0.11 0.16 5.59 71.24 0.40 0.55 16 25 C -0.11 -0.15 5.52 -19.87 -0.11 -0.26 16 26 C -0.11 0.04 9.70 22.27 0.22 0.25 16 27 C -0.13 0.21 10.05 22.27 0.22 0.44 16 28 C -0.12 0.18 10.05 22.27 0.22 0.41 16 29 C -0.13 0.08 10.05 22.27 0.22 0.31 16 30 C -0.11 -0.10 9.70 22.27 0.22 0.12 16 31 C -0.13 0.64 7.43 31.12 0.23 0.87 16 32 C -0.19 2.38 9.04 22.36 0.20 2.58 16 33 C 0.00 0.06 8.66 22.25 0.19 0.25 16 34 H 0.39 -3.20 8.70 -74.06 -0.64 -3.85 16 35 H 0.13 -0.94 7.96 -2.39 -0.02 -0.96 16 36 H -0.26 2.53 7.11 99.48 0.71 3.24 16 37 H -0.31 0.16 7.11 99.48 0.71 0.87 16 38 H 0.15 0.49 7.61 -2.91 -0.02 0.47 16 39 H 0.15 -2.76 7.67 -2.39 -0.02 -2.77 16 40 H 0.15 -2.90 7.65 -2.39 -0.02 -2.92 16 41 H 0.43 -8.02 8.70 -92.71 -0.81 -8.83 16 42 H 0.10 -0.20 7.43 -2.39 -0.02 -0.22 16 43 H 0.11 -1.22 8.14 -2.39 -0.02 -1.24 16 44 H 0.08 0.14 8.08 -2.38 -0.02 0.12 16 45 H 0.08 0.05 8.08 -2.38 -0.02 0.03 16 46 H 0.14 -0.48 8.06 -2.91 -0.02 -0.51 16 47 H 0.14 -0.84 8.06 -2.91 -0.02 -0.87 16 48 H 0.14 -0.81 8.06 -2.91 -0.02 -0.83 16 49 H 0.14 -0.59 8.06 -2.91 -0.02 -0.62 16 50 H 0.13 -0.16 8.06 -2.91 -0.02 -0.19 16 51 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 52 H 0.09 -0.18 8.09 -2.38 -0.02 -0.20 16 53 H 0.21 -4.85 6.30 -2.91 -0.02 -4.87 16 54 H 0.19 -3.90 4.88 -2.91 -0.01 -3.91 16 Total: 0.00 -46.13 468.00 2.27 -43.86 By element: Atomic # 1 Polarization: -30.31 SS G_CDS: -0.42 Total: -30.73 kcal Atomic # 6 Polarization: 4.52 SS G_CDS: 4.69 Total: 9.21 kcal Atomic # 7 Polarization: 7.11 SS G_CDS: -2.52 Total: 4.59 kcal Atomic # 8 Polarization: -18.92 SS G_CDS: -1.52 Total: -20.44 kcal Atomic # 14 Polarization: -8.54 SS G_CDS: 2.04 Total: -6.49 kcal Total: -46.13 2.27 -43.86 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12636046_4549638.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.951 kcal (2) G-P(sol) polarization free energy of solvation -46.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.082 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.860 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.811 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds