Wall clock time and date at job start Tue Mar 9 2021 12:57:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34236 * 116.99797 * 2 1 4 4 O 1.20833 * 119.99729 * 359.97438 * 3 2 1 5 5 C 1.50693 * 120.00278 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.84942 * 324.06439 * 5 3 2 7 7 C 1.34774 * 120.00234 * 293.64580 * 6 5 3 8 8 O 1.21625 * 120.00060 * 354.96760 * 7 6 5 9 9 C 1.47298 * 120.00130 * 174.97094 * 7 6 5 10 10 C 1.39824 * 120.13759 * 0.27027 * 9 7 6 11 11 C 1.37581 * 119.96387 * 180.30326 * 10 9 7 12 12 C 1.50699 * 119.87787 * 179.70501 * 11 10 9 13 13 O 1.42901 * 109.47331 * 105.01987 * 12 11 10 14 14 Si 1.86297 * 109.47219 * 345.01589 * 12 11 10 15 15 C 1.39143 * 120.24200 * 359.72168 * 11 10 9 16 16 O 1.35710 * 119.86575 * 180.02562 * 15 11 10 17 17 C 1.42900 * 117.00132 * 179.97438 * 16 15 11 18 18 C 1.38736 * 120.27149 * 359.97438 * 15 11 10 19 19 C 1.38394 * 120.03135 * 0.02660 * 18 15 11 20 20 O 1.35660 * 120.11705 * 180.02562 * 19 18 15 21 21 C 1.42900 * 117.00230 * 359.97438 * 20 19 18 22 22 C 1.53787 * 113.61476 * 192.87316 * 5 3 2 23 23 C 1.53789 * 87.07660 * 270.79833 * 22 5 3 24 24 H 1.08992 * 113.61421 * 89.11738 * 23 22 5 25 25 O 1.42902 * 113.61041 * 220.01819 * 23 22 5 26 26 C 1.53775 * 87.08144 * 334.56685 * 23 22 5 27 27 H 1.08998 * 109.47584 * 60.00548 * 1 2 3 28 28 H 1.09004 * 109.46617 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47031 * 299.99699 * 1 2 3 30 30 H 0.97006 * 119.99832 * 113.64474 * 6 5 3 31 31 H 1.07996 * 120.01519 * 0.02562 * 10 9 7 32 32 H 1.09002 * 109.46712 * 225.02119 * 12 11 10 33 33 H 0.96703 * 113.99850 * 299.99565 * 13 12 11 34 34 H 1.48501 * 110.00034 * 58.68404 * 14 12 11 35 35 H 1.48503 * 110.00083 * 180.02562 * 14 12 11 36 36 H 1.09007 * 109.46829 * 179.97438 * 17 16 15 37 37 H 1.09002 * 109.46619 * 299.99294 * 17 16 15 38 38 H 1.08999 * 109.47268 * 59.99760 * 17 16 15 39 39 H 1.07996 * 119.97858 * 180.02562 * 18 15 11 40 40 H 1.09001 * 109.47226 * 180.02562 * 21 20 19 41 41 H 1.08998 * 109.46955 * 59.99744 * 21 20 19 42 42 H 1.08999 * 109.46773 * 300.00557 * 21 20 19 43 43 H 1.09001 * 113.61375 * 25.34193 * 22 5 3 44 44 H 1.08998 * 113.61843 * 156.16817 * 22 5 3 45 45 H 0.96698 * 113.99772 * 180.02562 * 25 23 22 46 46 H 1.08999 * 113.61678 * 270.88356 * 26 23 22 47 47 H 1.08999 * 113.61461 * 139.98517 * 26 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5662 1.2751 -0.0006 6 7 4.1919 0.2131 0.7913 7 6 4.0242 0.1814 2.1281 8 8 3.4310 1.0835 2.6882 9 6 4.5593 -0.9456 2.9111 10 6 5.2467 -1.9814 2.2710 11 6 5.7397 -3.0355 3.0049 12 6 6.4744 -4.1541 2.3122 13 8 7.8760 -4.0298 2.5618 14 14 6.1596 -4.0618 0.4783 15 6 5.5619 -3.0727 4.3845 16 8 6.0518 -4.1159 5.1011 17 6 5.8350 -4.0916 6.5133 18 6 4.8869 -2.0472 5.0306 19 6 4.3864 -0.9814 4.3033 20 8 3.7265 0.0225 4.9333 21 6 3.5835 -0.0845 6.3511 22 6 4.1095 2.6791 0.3134 23 6 4.0433 2.9568 -1.1977 24 1 3.0852 3.3597 -1.5260 25 8 5.1585 3.7008 -1.6924 26 6 4.1759 1.4385 -1.4029 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 4.7270 -0.4672 0.3533 31 1 5.3867 -1.9561 1.2004 32 1 6.1210 -5.1120 2.6937 33 1 8.2593 -3.1993 2.2479 34 1 6.6080 -2.7478 -0.0485 35 1 6.8784 -5.1601 -0.2163 36 1 6.2752 -4.9812 6.9638 37 1 6.2999 -3.2014 6.9369 38 1 4.7642 -4.0740 6.7163 39 1 4.7520 -2.0807 6.1015 40 1 3.0381 0.7808 6.7277 41 1 4.5696 -0.1226 6.8139 42 1 3.0333 -0.9939 6.5931 43 1 3.4246 3.2911 0.9002 44 1 5.1232 2.6755 0.7140 45 1 5.1224 3.8789 -2.6421 46 1 5.2082 1.0959 -1.4728 47 1 3.5446 1.0491 -2.2015 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:41 Heat of formation + Delta-G solvation = -190.378033 kcal Electronic energy + Delta-G solvation = -35580.480324 eV Core-core repulsion = 30698.395382 eV Total energy + Delta-G solvation = -4882.084942 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.149 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.48989 -41.92419 -40.43028 -40.00090 -39.32744 -38.49317 -37.35864 -37.03388 -36.37678 -34.06271 -32.25009 -31.63416 -29.16399 -29.09317 -28.28658 -27.11373 -26.40637 -26.07759 -24.54784 -23.19458 -22.62692 -21.47570 -20.61310 -20.11402 -19.23191 -18.90184 -18.22870 -18.09466 -18.00423 -17.66007 -17.26170 -17.21780 -16.83299 -16.61919 -16.53132 -16.33934 -15.87616 -15.79062 -15.64788 -15.46435 -15.40759 -14.88835 -14.47767 -14.28038 -14.25458 -14.09525 -13.83255 -13.69186 -13.53175 -13.26400 -13.20565 -13.06416 -12.78178 -12.64683 -12.57400 -12.45686 -12.23525 -11.85351 -11.78122 -11.73349 -11.69765 -11.62091 -11.05891 -10.73949 -10.56521 -10.23135 -9.93280 -9.16733 -5.02944 -0.23430 0.09794 1.05801 1.21999 1.44912 1.55352 1.81720 1.89042 1.96353 2.03674 2.12620 2.64525 3.02283 3.14679 3.37080 3.40032 3.43081 3.53035 3.55513 3.68516 3.70712 3.81414 3.97065 4.04244 4.06452 4.11718 4.12152 4.12847 4.20181 4.22170 4.29629 4.39336 4.42161 4.50649 4.53416 4.55831 4.63110 4.70225 4.75718 4.89053 4.93404 5.01195 5.04041 5.25043 5.29186 5.40039 5.98709 6.25209 6.41438 6.44714 6.60684 6.72753 7.25309 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.349 6.349 3 C 0.480 3.520 4 O -0.490 6.490 5 C 0.159 3.841 6 N -0.713 5.713 7 C 0.570 3.430 8 O -0.506 6.506 9 C -0.207 4.207 10 C -0.011 4.011 11 C -0.194 4.194 12 C -0.058 4.058 13 O -0.524 6.524 14 Si 0.681 3.319 15 C 0.225 3.775 16 O -0.295 6.295 17 C 0.021 3.979 18 C -0.314 4.314 19 C 0.237 3.763 20 O -0.274 6.274 21 C 0.019 3.981 22 C -0.103 4.103 23 C 0.080 3.920 24 H 0.097 0.903 25 O -0.551 6.551 26 C -0.157 4.157 27 H 0.064 0.936 28 H 0.105 0.895 29 H 0.065 0.935 30 H 0.404 0.596 31 H 0.140 0.860 32 H 0.119 0.881 33 H 0.372 0.628 34 H -0.257 1.257 35 H -0.253 1.253 36 H 0.107 0.893 37 H 0.059 0.941 38 H 0.060 0.940 39 H 0.145 0.855 40 H 0.107 0.893 41 H 0.058 0.942 42 H 0.058 0.942 43 H 0.097 0.903 44 H 0.108 0.892 45 H 0.382 0.618 46 H 0.116 0.884 47 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.792 -4.231 -0.538 4.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.265 6.265 3 C 0.320 3.680 4 O -0.375 6.375 5 C 0.070 3.930 6 N -0.369 5.369 7 C 0.358 3.642 8 O -0.381 6.381 9 C -0.211 4.211 10 C -0.029 4.029 11 C -0.196 4.196 12 C -0.167 4.167 13 O -0.330 6.330 14 Si 0.582 3.418 15 C 0.177 3.823 16 O -0.206 6.206 17 C -0.074 4.074 18 C -0.334 4.334 19 C 0.187 3.813 20 O -0.184 6.184 21 C -0.076 4.076 22 C -0.141 4.141 23 C 0.021 3.979 24 H 0.114 0.886 25 O -0.357 6.357 26 C -0.195 4.195 27 H 0.083 0.917 28 H 0.123 0.877 29 H 0.083 0.917 30 H 0.241 0.759 31 H 0.157 0.843 32 H 0.137 0.863 33 H 0.220 0.780 34 H -0.182 1.182 35 H -0.177 1.177 36 H 0.125 0.875 37 H 0.078 0.922 38 H 0.078 0.922 39 H 0.163 0.837 40 H 0.125 0.875 41 H 0.076 0.924 42 H 0.077 0.923 43 H 0.116 0.884 44 H 0.127 0.873 45 H 0.230 0.770 46 H 0.134 0.866 47 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.044 -3.803 -0.137 3.946 hybrid contribution 0.676 0.133 0.295 0.750 sum -0.368 -3.670 0.158 3.692 Atomic orbital electron populations 1.23350 0.75743 1.04080 1.02774 1.86499 1.23750 1.32657 1.83556 1.23114 0.90568 0.81884 0.72401 1.90695 1.66067 1.36366 1.44411 1.20953 0.85904 0.90900 0.95197 1.45665 1.54091 1.30415 1.06721 1.17883 0.79421 0.85613 0.81268 1.90887 1.40554 1.36812 1.69802 1.18906 1.11934 0.99387 0.90919 1.20888 0.92156 0.90682 0.99211 1.19359 1.08882 1.00137 0.91192 1.24796 0.82244 0.99400 1.10309 1.86658 1.20626 1.43193 1.82492 0.95204 0.91734 0.80540 0.74330 1.18720 0.87849 0.85182 0.90529 1.86162 1.72645 1.40935 1.20839 1.23223 1.01907 1.04109 0.78120 1.21302 1.12526 0.98122 1.01447 1.18710 0.86542 0.85654 0.90398 1.86402 1.69065 1.41049 1.21901 1.23248 1.01935 1.03977 0.78484 1.23306 1.03362 0.91792 0.95655 1.23244 0.90521 0.88825 0.95355 0.88570 1.86543 1.44463 1.75763 1.28917 1.24068 1.03121 0.99132 0.93165 0.91685 0.87711 0.91667 0.75911 0.84254 0.86339 0.78044 1.18188 1.17726 0.87477 0.92245 0.92183 0.83726 0.87453 0.92364 0.92331 0.88441 0.87346 0.76983 0.86596 0.89367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.08 16 2 O -0.35 -0.88 10.42 -39.27 -0.41 -1.29 16 3 C 0.48 1.76 6.45 36.00 0.23 1.99 16 4 O -0.49 -2.93 15.11 -18.76 -0.28 -3.22 16 5 C 0.16 0.24 1.11 -132.16 -0.15 0.09 16 6 N -0.71 -0.53 5.07 -49.03 -0.25 -0.78 16 7 C 0.57 2.03 7.41 -12.58 -0.09 1.94 16 8 O -0.51 -3.67 14.19 -16.67 -0.24 -3.90 16 9 C -0.21 -0.43 5.89 -104.83 -0.62 -1.05 16 10 C -0.01 0.00 8.13 -39.23 -0.32 -0.31 16 11 C -0.19 -0.03 5.27 -104.53 -0.55 -0.59 16 12 C -0.06 0.02 2.37 36.01 0.09 0.10 16 13 O -0.52 -0.64 12.88 -35.23 -0.45 -1.10 16 14 Si 0.68 -1.33 30.24 -169.99 -5.14 -6.47 16 15 C 0.23 0.21 6.67 -39.06 -0.26 -0.05 16 16 O -0.29 -0.26 9.80 -18.84 -0.18 -0.44 16 17 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 18 C -0.31 -0.18 8.01 -39.34 -0.31 -0.49 16 19 C 0.24 0.58 6.70 -38.74 -0.26 0.32 16 20 O -0.27 -0.95 8.56 -40.60 -0.35 -1.29 16 21 C 0.02 -0.02 9.81 101.05 0.99 0.98 16 22 C -0.10 -0.26 6.15 -25.91 -0.16 -0.42 16 23 C 0.08 0.04 4.82 -25.92 -0.13 -0.09 16 24 H 0.10 0.05 7.62 -51.93 -0.40 -0.34 16 25 O -0.55 -0.26 13.67 -35.23 -0.48 -0.74 16 26 C -0.16 0.22 7.21 -25.92 -0.19 0.03 16 27 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 28 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.06 0.08 8.13 -51.93 -0.42 -0.34 16 30 H 0.40 -0.89 6.74 -40.82 -0.28 -1.17 16 31 H 0.14 -0.38 3.17 -52.49 -0.17 -0.55 16 32 H 0.12 -0.02 7.82 -51.93 -0.41 -0.43 16 33 H 0.37 -0.69 8.70 45.56 0.40 -0.30 16 34 H -0.26 0.42 6.68 56.52 0.38 0.80 16 35 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 36 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 37 H 0.06 -0.19 7.65 -51.93 -0.40 -0.58 16 38 H 0.06 -0.21 7.65 -51.93 -0.40 -0.61 16 39 H 0.15 -0.23 4.50 -52.49 -0.24 -0.47 16 40 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 41 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 42 H 0.06 -0.14 7.66 -51.93 -0.40 -0.53 16 43 H 0.10 0.45 7.64 -51.93 -0.40 0.05 16 44 H 0.11 0.28 8.14 -51.93 -0.42 -0.14 16 45 H 0.38 -1.48 9.12 45.56 0.42 -1.06 16 46 H 0.12 -0.31 8.14 -51.93 -0.42 -0.74 16 47 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 LS Contribution 391.07 15.07 5.89 5.89 Total: 0.00 -12.17 391.07 -6.81 -18.98 By element: Atomic # 1 Polarization: -4.85 SS G_CDS: -5.25 Total: -10.10 kcal Atomic # 6 Polarization: 4.13 SS G_CDS: 0.33 Total: 4.47 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.25 Total: -0.78 kcal Atomic # 8 Polarization: -9.59 SS G_CDS: -2.40 Total: -11.98 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.14 Total: -6.47 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -12.17 -6.81 -18.98 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -171.399 kcal (2) G-P(sol) polarization free energy of solvation -12.166 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.565 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.813 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.979 kcal (6) G-S(sol) free energy of system = (1) + (5) -190.378 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds