Wall clock time and date at job start Tue Mar 9 2021 12:57:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34236 * 116.99797 * 2 1 4 4 O 1.20833 * 119.99729 * 359.97438 * 3 2 1 5 5 C 1.50693 * 120.00278 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.84942 * 324.06439 * 5 3 2 7 7 C 1.34774 * 120.00234 * 293.64580 * 6 5 3 8 8 O 1.21625 * 120.00060 * 354.96760 * 7 6 5 9 9 C 1.47298 * 120.00130 * 174.97094 * 7 6 5 10 10 C 1.39824 * 120.13759 * 0.27027 * 9 7 6 11 11 C 1.37581 * 119.96387 * 180.30326 * 10 9 7 12 12 C 1.50699 * 119.87787 * 179.70501 * 11 10 9 13 13 O 1.42901 * 109.47331 * 105.01987 * 12 11 10 14 14 Si 1.86297 * 109.47219 * 345.01589 * 12 11 10 15 15 C 1.39143 * 120.24200 * 359.72168 * 11 10 9 16 16 O 1.35710 * 119.86575 * 180.02562 * 15 11 10 17 17 C 1.42900 * 117.00132 * 179.97438 * 16 15 11 18 18 C 1.38736 * 120.27149 * 359.97438 * 15 11 10 19 19 C 1.38394 * 120.03135 * 0.02660 * 18 15 11 20 20 O 1.35660 * 120.11705 * 180.02562 * 19 18 15 21 21 C 1.42900 * 117.00230 * 359.97438 * 20 19 18 22 22 C 1.53787 * 113.61476 * 192.87316 * 5 3 2 23 23 C 1.53789 * 87.07660 * 270.79833 * 22 5 3 24 24 H 1.08992 * 113.61421 * 89.11738 * 23 22 5 25 25 O 1.42902 * 113.61041 * 220.01819 * 23 22 5 26 26 C 1.53775 * 87.08144 * 334.56685 * 23 22 5 27 27 H 1.08998 * 109.47584 * 60.00548 * 1 2 3 28 28 H 1.09004 * 109.46617 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47031 * 299.99699 * 1 2 3 30 30 H 0.97006 * 119.99832 * 113.64474 * 6 5 3 31 31 H 1.07996 * 120.01519 * 0.02562 * 10 9 7 32 32 H 1.09002 * 109.46712 * 225.02119 * 12 11 10 33 33 H 0.96703 * 113.99850 * 299.99565 * 13 12 11 34 34 H 1.48501 * 110.00034 * 58.68404 * 14 12 11 35 35 H 1.48503 * 110.00083 * 180.02562 * 14 12 11 36 36 H 1.09007 * 109.46829 * 179.97438 * 17 16 15 37 37 H 1.09002 * 109.46619 * 299.99294 * 17 16 15 38 38 H 1.08999 * 109.47268 * 59.99760 * 17 16 15 39 39 H 1.07996 * 119.97858 * 180.02562 * 18 15 11 40 40 H 1.09001 * 109.47226 * 180.02562 * 21 20 19 41 41 H 1.08998 * 109.46955 * 59.99744 * 21 20 19 42 42 H 1.08999 * 109.46773 * 300.00557 * 21 20 19 43 43 H 1.09001 * 113.61375 * 25.34193 * 22 5 3 44 44 H 1.08998 * 113.61843 * 156.16817 * 22 5 3 45 45 H 0.96698 * 113.99772 * 180.02562 * 25 23 22 46 46 H 1.08999 * 113.61678 * 270.88356 * 26 23 22 47 47 H 1.08999 * 113.61461 * 139.98517 * 26 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5662 1.2751 -0.0006 6 7 4.1919 0.2131 0.7913 7 6 4.0242 0.1814 2.1281 8 8 3.4310 1.0835 2.6882 9 6 4.5593 -0.9456 2.9111 10 6 5.2467 -1.9814 2.2710 11 6 5.7397 -3.0355 3.0049 12 6 6.4744 -4.1541 2.3122 13 8 7.8760 -4.0298 2.5618 14 14 6.1596 -4.0618 0.4783 15 6 5.5619 -3.0727 4.3845 16 8 6.0518 -4.1159 5.1011 17 6 5.8350 -4.0916 6.5133 18 6 4.8869 -2.0472 5.0306 19 6 4.3864 -0.9814 4.3033 20 8 3.7265 0.0225 4.9333 21 6 3.5835 -0.0845 6.3511 22 6 4.1095 2.6791 0.3134 23 6 4.0433 2.9568 -1.1977 24 1 3.0852 3.3597 -1.5260 25 8 5.1585 3.7008 -1.6924 26 6 4.1759 1.4385 -1.4029 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 4.7270 -0.4672 0.3533 31 1 5.3867 -1.9561 1.2004 32 1 6.1210 -5.1120 2.6937 33 1 8.2593 -3.1993 2.2479 34 1 6.6080 -2.7478 -0.0485 35 1 6.8784 -5.1601 -0.2163 36 1 6.2752 -4.9812 6.9638 37 1 6.2999 -3.2014 6.9369 38 1 4.7642 -4.0740 6.7163 39 1 4.7520 -2.0807 6.1015 40 1 3.0381 0.7808 6.7277 41 1 4.5696 -0.1226 6.8139 42 1 3.0333 -0.9939 6.5931 43 1 3.4246 3.2911 0.9002 44 1 5.1232 2.6755 0.7140 45 1 5.1224 3.8789 -2.6421 46 1 5.2082 1.0959 -1.4728 47 1 3.5446 1.0491 -2.2015 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12808048_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:40 Heat of formation + Delta-G solvation = -197.348028 kcal Electronic energy + Delta-G solvation = -35580.782566 eV Core-core repulsion = 30698.395382 eV Total energy + Delta-G solvation = -4882.387184 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.149 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.63436 -41.97476 -40.57062 -40.06576 -39.44908 -38.50330 -37.58237 -37.07529 -36.47526 -34.19632 -32.26872 -31.65691 -29.24179 -28.99366 -28.20679 -27.15214 -26.46821 -26.07926 -24.62682 -23.27313 -22.64587 -21.58584 -20.75408 -20.13511 -19.34394 -18.95270 -18.29743 -18.20226 -18.02742 -17.76881 -17.43168 -17.21339 -16.93397 -16.62011 -16.55362 -16.31250 -15.87183 -15.80050 -15.74759 -15.50243 -15.42351 -14.99718 -14.58379 -14.40197 -14.20595 -14.06353 -13.81036 -13.64532 -13.57963 -13.36400 -13.20496 -13.13914 -12.68943 -12.60932 -12.54725 -12.53258 -12.21158 -11.91757 -11.90451 -11.81987 -11.72117 -11.68085 -11.06874 -10.94786 -10.52121 -10.41398 -9.93820 -9.22087 -4.86536 -0.29140 0.07351 0.83544 1.33658 1.42698 1.58329 1.69487 1.85110 2.01749 2.11720 2.16018 2.55621 2.99527 3.14373 3.34964 3.43520 3.46646 3.48801 3.52373 3.68475 3.73485 3.80928 4.06283 4.11202 4.16212 4.22352 4.22825 4.25727 4.25809 4.27371 4.29995 4.50579 4.56666 4.57567 4.62273 4.64810 4.67502 4.69973 4.73901 4.79242 4.86524 4.91942 5.02617 5.14759 5.24583 5.29405 6.02211 6.25232 6.37417 6.51411 6.59242 6.83724 7.09891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.350 6.350 3 C 0.477 3.523 4 O -0.523 6.523 5 C 0.154 3.846 6 N -0.697 5.697 7 C 0.567 3.433 8 O -0.552 6.552 9 C -0.225 4.225 10 C 0.003 3.997 11 C -0.196 4.196 12 C -0.072 4.072 13 O -0.546 6.546 14 Si 0.758 3.242 15 C 0.218 3.782 16 O -0.311 6.311 17 C 0.012 3.988 18 C -0.311 4.311 19 C 0.220 3.780 20 O -0.305 6.305 21 C 0.011 3.989 22 C -0.113 4.113 23 C 0.085 3.915 24 H 0.091 0.909 25 O -0.566 6.566 26 C -0.134 4.134 27 H 0.070 0.930 28 H 0.135 0.865 29 H 0.049 0.951 30 H 0.420 0.580 31 H 0.164 0.836 32 H 0.113 0.887 33 H 0.384 0.616 34 H -0.249 1.249 35 H -0.300 1.300 36 H 0.119 0.881 37 H 0.066 0.934 38 H 0.072 0.928 39 H 0.163 0.837 40 H 0.111 0.889 41 H 0.071 0.929 42 H 0.073 0.927 43 H 0.064 0.936 44 H 0.104 0.896 45 H 0.401 0.599 46 H 0.138 0.862 47 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.209 -5.542 -1.634 5.782 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.265 6.265 3 C 0.319 3.681 4 O -0.411 6.411 5 C 0.065 3.935 6 N -0.354 5.354 7 C 0.357 3.643 8 O -0.430 6.430 9 C -0.229 4.229 10 C -0.015 4.015 11 C -0.197 4.197 12 C -0.180 4.180 13 O -0.354 6.354 14 Si 0.660 3.340 15 C 0.169 3.831 16 O -0.222 6.222 17 C -0.082 4.082 18 C -0.330 4.330 19 C 0.170 3.830 20 O -0.216 6.216 21 C -0.084 4.084 22 C -0.152 4.152 23 C 0.025 3.975 24 H 0.109 0.891 25 O -0.375 6.375 26 C -0.172 4.172 27 H 0.089 0.911 28 H 0.153 0.847 29 H 0.068 0.932 30 H 0.260 0.740 31 H 0.181 0.819 32 H 0.131 0.869 33 H 0.233 0.767 34 H -0.174 1.174 35 H -0.228 1.228 36 H 0.137 0.863 37 H 0.085 0.915 38 H 0.090 0.910 39 H 0.180 0.820 40 H 0.129 0.871 41 H 0.089 0.911 42 H 0.092 0.908 43 H 0.083 0.917 44 H 0.123 0.877 45 H 0.252 0.748 46 H 0.156 0.844 47 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -0.447 -5.130 -1.243 5.297 hybrid contribution 0.507 0.473 0.736 1.012 sum 0.061 -4.657 -0.507 4.684 Atomic orbital electron populations 1.23584 0.74675 1.05959 1.02334 1.86493 1.24891 1.32017 1.83132 1.23561 0.91430 0.81723 0.71432 1.90675 1.66951 1.37392 1.46036 1.20995 0.84933 0.90380 0.97157 1.45516 1.53512 1.30465 1.05905 1.18180 0.78745 0.85389 0.81989 1.90864 1.42767 1.38546 1.70840 1.18983 1.13117 0.99726 0.91042 1.21005 0.90843 0.89467 1.00167 1.19494 1.08716 1.00313 0.91170 1.25109 0.81601 0.98981 1.12272 1.86619 1.21410 1.44231 1.83150 0.94305 0.90215 0.78424 0.71009 1.18940 0.87780 0.85277 0.91064 1.86147 1.72714 1.40963 1.22404 1.23469 1.03015 1.05108 0.76632 1.21409 1.11970 0.97374 1.02280 1.18970 0.87072 0.86065 0.90862 1.86366 1.69494 1.41944 1.23823 1.23465 1.03052 1.04952 0.76889 1.23296 1.02303 0.92518 0.97053 1.23097 0.90377 0.90377 0.93635 0.89086 1.86495 1.44267 1.75914 1.30807 1.24044 1.04432 0.97173 0.91506 0.91105 0.84669 0.93188 0.73973 0.81901 0.86885 0.76700 1.17410 1.22816 0.86299 0.91527 0.90971 0.81999 0.87112 0.91052 0.90839 0.91686 0.87732 0.74783 0.84415 0.87218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 113.37 1.20 1.22 16 2 O -0.35 -1.81 10.42 -51.47 -0.54 -2.34 16 3 C 0.48 3.94 6.45 71.23 0.46 4.40 16 4 O -0.52 -7.31 15.11 21.94 0.33 -6.98 16 5 C 0.15 0.50 1.11 3.38 0.00 0.51 16 6 N -0.70 -0.87 5.07 -427.27 -2.17 -3.04 16 7 C 0.57 4.61 7.41 86.63 0.64 5.26 16 8 O -0.55 -9.38 14.19 16.85 0.24 -9.14 16 9 C -0.22 -1.04 5.89 -20.00 -0.12 -1.16 16 10 C 0.00 -0.01 8.13 22.50 0.18 0.18 16 11 C -0.20 0.03 5.27 -19.80 -0.10 -0.07 16 12 C -0.07 0.08 2.37 71.24 0.17 0.25 16 13 O -0.55 -1.18 12.88 -148.98 -1.92 -3.10 16 14 Si 0.76 -4.03 30.24 68.60 2.07 -1.95 16 15 C 0.22 0.38 6.67 22.61 0.15 0.53 16 16 O -0.31 -0.49 9.80 -90.31 -0.89 -1.38 16 17 C 0.01 -0.06 9.80 113.37 1.11 1.05 16 18 C -0.31 -0.38 8.01 22.43 0.18 -0.20 16 19 C 0.22 1.27 6.70 22.82 0.15 1.42 16 20 O -0.31 -2.61 8.56 -68.80 -0.59 -3.20 16 21 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 22 C -0.11 -0.76 6.15 31.13 0.19 -0.56 16 23 C 0.09 0.09 4.82 31.12 0.15 0.24 16 24 H 0.09 0.17 7.62 -2.39 -0.02 0.15 16 25 O -0.57 -0.25 13.67 -148.98 -2.04 -2.29 16 26 C -0.13 0.58 7.21 31.12 0.22 0.81 16 27 H 0.07 -0.03 8.13 -2.39 -0.02 -0.05 16 28 H 0.14 -0.79 8.14 -2.38 -0.02 -0.81 16 29 H 0.05 0.20 8.13 -2.39 -0.02 0.18 16 30 H 0.42 -2.60 6.74 -92.70 -0.62 -3.22 16 31 H 0.16 -1.23 3.17 -2.91 -0.01 -1.24 16 32 H 0.11 -0.04 7.82 -2.39 -0.02 -0.06 16 33 H 0.38 -1.66 8.70 -74.06 -0.64 -2.30 16 34 H -0.25 1.61 6.68 99.48 0.66 2.27 16 35 H -0.30 -0.88 7.11 99.48 0.71 -0.18 16 36 H 0.12 -0.96 8.14 -2.38 -0.02 -0.98 16 37 H 0.07 -0.46 7.65 -2.39 -0.02 -0.48 16 38 H 0.07 -0.57 7.65 -2.39 -0.02 -0.59 16 39 H 0.16 -0.58 4.50 -2.91 -0.01 -0.59 16 40 H 0.11 -0.26 8.14 -2.39 -0.02 -0.28 16 41 H 0.07 -0.29 7.66 -2.39 -0.02 -0.31 16 42 H 0.07 -0.33 7.66 -2.39 -0.02 -0.35 16 43 H 0.06 0.84 7.64 -2.39 -0.02 0.82 16 44 H 0.10 0.71 8.14 -2.39 -0.02 0.69 16 45 H 0.40 -3.52 9.12 -74.06 -0.68 -4.20 16 46 H 0.14 -1.16 8.14 -2.39 -0.02 -1.18 16 47 H 0.11 -0.87 8.10 -2.39 -0.02 -0.89 16 Total: 0.00 -31.38 391.07 -0.66 -32.04 By element: Atomic # 1 Polarization: -12.70 SS G_CDS: -0.88 Total: -13.58 kcal Atomic # 6 Polarization: 9.26 SS G_CDS: 5.70 Total: 14.96 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: -2.17 Total: -3.04 kcal Atomic # 8 Polarization: -23.03 SS G_CDS: -5.39 Total: -28.43 kcal Atomic # 14 Polarization: -4.03 SS G_CDS: 2.07 Total: -1.95 kcal Total: -31.38 -0.66 -32.04 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.304 kcal (2) G-P(sol) polarization free energy of solvation -31.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -196.685 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.663 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.044 kcal (6) G-S(sol) free energy of system = (1) + (5) -197.348 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds