Wall clock time and date at job start Tue Mar 9 2021 12:58:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34223 * 117.00439 * 2 1 4 4 O 1.20826 * 119.99630 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00102 * 180.02562 * 3 2 1 6 6 N 1.46497 * 112.85243 * 324.05660 * 5 3 2 7 7 C 1.34777 * 120.00376 * 293.64927 * 6 5 3 8 8 O 1.21699 * 119.99515 * 354.98049 * 7 6 5 9 9 C 1.46425 * 120.00211 * 174.98365 * 7 6 5 10 10 C 1.34813 * 119.99920 * 179.97438 * 9 7 6 11 11 C 1.47203 * 120.00107 * 179.97438 * 10 9 7 12 12 C 1.39835 * 120.17178 * 179.97438 * 11 10 9 13 13 C 1.37891 * 119.82392 * 180.25831 * 12 11 10 14 14 C 1.38399 * 120.17260 * 359.45159 * 13 12 11 15 15 C 1.50704 * 119.82909 * 180.25861 * 14 13 12 16 16 O 1.42903 * 109.47118 * 245.29711 * 15 14 13 17 17 Si 1.86300 * 109.46774 * 5.29498 * 15 14 13 18 18 C 1.38407 * 120.34503 * 0.55339 * 14 13 12 19 19 C 1.37892 * 120.16999 * 359.72716 * 18 14 13 20 20 C 1.53788 * 113.61410 * 192.86523 * 5 3 2 21 21 C 1.53782 * 87.07856 * 270.80176 * 20 5 3 22 22 H 1.08997 * 113.62157 * 89.11546 * 21 20 5 23 23 O 1.42900 * 113.61172 * 219.93691 * 21 20 5 24 24 C 1.53780 * 113.69058 * 95.32991 * 5 3 2 25 25 H 1.09001 * 109.47233 * 59.99483 * 1 2 3 26 26 H 1.08995 * 109.47300 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.46803 * 299.99551 * 1 2 3 28 28 H 0.96999 * 120.00061 * 113.64021 * 6 5 3 29 29 H 1.07999 * 119.99932 * 359.97438 * 9 7 6 30 30 H 1.08001 * 119.99638 * 0.02562 * 10 9 7 31 31 H 1.08000 * 120.08685 * 359.97438 * 12 11 10 32 32 H 1.07997 * 119.90995 * 179.72693 * 13 12 11 33 33 H 1.09001 * 109.47235 * 125.29317 * 15 14 13 34 34 H 0.96701 * 113.99856 * 59.99253 * 16 15 14 35 35 H 1.48499 * 109.99865 * 180.02562 * 17 15 14 36 36 H 1.48497 * 110.00373 * 301.31850 * 17 15 14 37 37 H 1.07998 * 119.91326 * 179.74400 * 18 14 13 38 38 H 1.07992 * 120.08634 * 179.97438 * 19 18 14 39 39 H 1.09004 * 113.61285 * 25.34611 * 20 5 3 40 40 H 1.08997 * 113.61622 * 156.16555 * 20 5 3 41 41 H 0.96706 * 114.00267 * 180.02562 * 23 21 20 42 42 H 1.09004 * 113.61211 * 203.67511 * 24 5 3 43 43 H 1.08996 * 113.61581 * 334.57866 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2092 -0.0005 5 6 3.5664 1.2747 -0.0006 6 7 4.1920 0.2128 0.7914 7 6 4.0242 0.1812 2.1283 8 8 3.4305 1.0839 2.6884 9 6 4.5563 -0.9390 2.9067 10 6 4.3889 -0.9702 4.2441 11 6 4.9234 -2.0966 5.0266 12 6 4.7523 -2.1324 6.4140 13 6 5.2605 -3.1884 7.1407 14 6 5.9286 -4.2167 6.4990 15 6 6.4758 -5.3699 7.3002 16 8 7.9027 -5.3701 7.2214 17 14 5.9522 -5.1938 9.0794 18 6 6.1021 -4.1885 5.1262 19 6 5.6047 -3.1366 4.3863 20 6 4.1099 2.6787 0.3132 21 6 4.0436 2.9562 -1.1979 22 1 3.0856 3.3592 -1.5263 23 8 5.1580 3.7016 -1.6923 24 6 4.1760 1.4379 -1.4029 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 4.7269 -0.4677 0.3536 29 1 5.0829 -1.7402 2.4095 30 1 3.8620 -0.1692 4.7411 31 1 4.2275 -1.3328 6.9156 32 1 5.1330 -3.2152 8.2127 33 1 6.0897 -6.3069 6.8988 34 1 8.3155 -4.5646 7.5619 35 1 6.4860 -6.3247 9.8802 36 1 6.4454 -3.9055 9.6290 37 1 6.6281 -4.9926 4.6332 38 1 5.7412 -3.1157 3.3152 39 1 3.4250 3.2909 0.9000 40 1 5.1235 2.6750 0.7139 41 1 5.1219 3.8798 -2.6421 42 1 5.2084 1.0951 -1.4728 43 1 3.5447 1.0485 -2.2015 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:11 Heat of formation + Delta-G solvation = -114.290113 kcal Electronic energy + Delta-G solvation = -28019.528299 eV Core-core repulsion = 23805.418639 eV Total energy + Delta-G solvation = -4214.109660 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.134 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.47477 -40.83953 -40.42538 -39.60328 -37.93947 -37.43100 -36.49868 -35.13890 -34.04074 -32.19197 -31.43327 -29.23947 -27.50045 -27.16926 -26.17946 -24.26473 -23.99941 -22.99914 -22.02123 -20.73308 -20.49659 -19.30045 -18.68751 -18.56116 -18.22863 -17.81770 -17.43840 -17.01980 -16.83823 -16.42027 -16.34112 -16.03684 -15.77624 -15.52166 -15.43752 -14.89811 -14.70166 -14.56114 -14.30390 -14.09917 -13.91304 -13.89002 -13.65255 -13.54361 -13.31156 -13.13218 -12.97647 -12.53735 -12.30175 -12.14525 -11.87935 -11.80494 -11.71006 -11.66315 -11.39591 -11.12265 -10.95470 -10.66683 -10.32938 -10.08329 -9.34653 -5.01693 -0.62723 0.29290 0.82136 0.99612 1.21428 1.52252 1.53382 1.89807 1.91032 2.21732 2.72068 2.96464 3.09315 3.28268 3.33171 3.44521 3.49097 3.57513 3.64996 3.68987 3.83250 4.01188 4.06318 4.13164 4.13938 4.22400 4.23377 4.34332 4.37656 4.46096 4.47917 4.56949 4.64495 4.78450 4.83352 4.86733 4.95777 4.99527 5.03541 5.18743 5.29121 5.33579 5.37104 5.52362 5.79202 6.31986 6.32093 6.56419 6.65293 7.10729 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.350 6.350 3 C 0.479 3.521 4 O -0.489 6.489 5 C 0.157 3.843 6 N -0.706 5.706 7 C 0.552 3.448 8 O -0.531 6.531 9 C -0.213 4.213 10 C -0.012 4.012 11 C -0.073 4.073 12 C -0.087 4.087 13 C -0.121 4.121 14 C -0.105 4.105 15 C -0.077 4.077 16 O -0.529 6.529 17 Si 0.686 3.314 18 C -0.095 4.095 19 C -0.099 4.099 20 C -0.103 4.103 21 C 0.080 3.920 22 H 0.096 0.904 23 O -0.551 6.551 24 C -0.156 4.156 25 H 0.065 0.935 26 H 0.104 0.896 27 H 0.065 0.935 28 H 0.410 0.590 29 H 0.133 0.867 30 H 0.138 0.862 31 H 0.134 0.866 32 H 0.131 0.869 33 H 0.120 0.880 34 H 0.377 0.623 35 H -0.257 1.257 36 H -0.260 1.260 37 H 0.130 0.870 38 H 0.130 0.870 39 H 0.096 0.904 40 H 0.109 0.891 41 H 0.383 0.617 42 H 0.117 0.883 43 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.409 -3.889 -2.680 4.741 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.266 6.266 3 C 0.319 3.681 4 O -0.375 6.375 5 C 0.068 3.932 6 N -0.360 5.360 7 C 0.342 3.658 8 O -0.409 6.409 9 C -0.234 4.234 10 C -0.031 4.031 11 C -0.073 4.073 12 C -0.105 4.105 13 C -0.138 4.138 14 C -0.105 4.105 15 C -0.187 4.187 16 O -0.335 6.335 17 Si 0.588 3.412 18 C -0.113 4.113 19 C -0.116 4.116 20 C -0.141 4.141 21 C 0.020 3.980 22 H 0.114 0.886 23 O -0.357 6.357 24 C -0.194 4.194 25 H 0.084 0.916 26 H 0.123 0.877 27 H 0.084 0.916 28 H 0.247 0.753 29 H 0.150 0.850 30 H 0.156 0.844 31 H 0.151 0.849 32 H 0.149 0.851 33 H 0.138 0.862 34 H 0.224 0.776 35 H -0.182 1.182 36 H -0.185 1.185 37 H 0.148 0.852 38 H 0.148 0.852 39 H 0.115 0.885 40 H 0.127 0.873 41 H 0.231 0.769 42 H 0.135 0.865 43 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -0.770 -3.479 -1.088 3.725 hybrid contribution 0.831 0.077 -1.147 1.418 sum 0.061 -3.402 -2.235 4.071 Atomic orbital electron populations 1.23359 0.75648 1.04106 1.02853 1.86493 1.23843 1.32715 1.83578 1.23129 0.90610 0.81882 0.72459 1.90698 1.66073 1.36351 1.44344 1.20980 0.85882 0.91009 0.95364 1.45633 1.53435 1.30180 1.06755 1.18434 0.79334 0.86360 0.81716 1.90874 1.41779 1.37900 1.70308 1.22795 1.06009 0.99463 0.95093 1.22424 0.92221 0.94995 0.93482 1.19056 0.99841 0.94915 0.93532 1.21355 0.98240 0.98125 0.92788 1.21032 0.98783 0.94126 0.99894 1.20466 0.98779 0.96344 0.94914 1.25074 0.83545 0.99758 1.10350 1.86615 1.17398 1.44253 1.85225 0.94924 0.91897 0.80108 0.74303 1.20983 0.98713 0.98437 0.93124 1.21472 0.96739 0.93254 1.00182 1.23306 1.03331 0.91752 0.95746 1.23240 0.90567 0.88863 0.95298 0.88604 1.86541 1.44509 1.75652 1.28978 1.24059 1.03140 0.99082 0.93072 0.91626 0.87720 0.91592 0.75345 0.84961 0.84392 0.84858 0.85146 0.86235 0.77575 1.18157 1.18460 0.85219 0.85187 0.88493 0.87311 0.76915 0.86483 0.89475 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.83 10.42 -39.24 -0.41 -1.24 16 3 C 0.48 1.61 6.44 36.00 0.23 1.84 16 4 O -0.49 -2.82 15.11 -18.75 -0.28 -3.10 16 5 C 0.16 0.14 1.11 -132.16 -0.15 0.00 16 6 N -0.71 0.32 5.12 -49.30 -0.25 0.06 16 7 C 0.55 1.04 7.39 -12.97 -0.10 0.95 16 8 O -0.53 -3.11 15.27 5.19 0.08 -3.03 16 9 C -0.21 0.11 9.41 -37.50 -0.35 -0.24 16 10 C -0.01 0.00 9.46 -37.16 -0.35 -0.35 16 11 C -0.07 0.03 5.87 -105.06 -0.62 -0.59 16 12 C -0.09 0.07 9.80 -39.11 -0.38 -0.31 16 13 C -0.12 0.13 8.65 -39.65 -0.34 -0.21 16 14 C -0.10 0.07 5.36 -104.50 -0.56 -0.49 16 15 C -0.08 0.07 2.80 36.01 0.10 0.17 16 16 O -0.53 -0.31 12.83 -35.23 -0.45 -0.77 16 17 Si 0.69 -1.01 29.88 -169.99 -5.08 -6.09 16 18 C -0.09 0.06 9.66 -39.65 -0.38 -0.32 16 19 C -0.10 0.10 9.41 -39.11 -0.37 -0.27 16 20 C -0.10 -0.21 6.15 -25.91 -0.16 -0.37 16 21 C 0.08 0.01 4.82 -25.92 -0.12 -0.11 16 22 H 0.10 0.03 7.62 -51.93 -0.40 -0.36 16 23 O -0.55 -0.10 13.67 -35.23 -0.48 -0.59 16 24 C -0.16 0.28 7.22 -25.92 -0.19 0.09 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 27 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 28 H 0.41 -1.53 8.69 -40.82 -0.35 -1.89 16 29 H 0.13 -0.44 6.07 -52.49 -0.32 -0.76 16 30 H 0.14 0.08 7.52 -52.49 -0.39 -0.32 16 31 H 0.13 -0.32 8.06 -52.49 -0.42 -0.74 16 32 H 0.13 -0.33 4.81 -52.49 -0.25 -0.58 16 33 H 0.12 -0.20 7.96 -51.93 -0.41 -0.62 16 34 H 0.38 -0.80 8.70 45.56 0.40 -0.40 16 35 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 36 H -0.26 -0.11 6.99 56.52 0.40 0.29 16 37 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 38 H 0.13 -0.39 6.17 -52.49 -0.32 -0.71 16 39 H 0.10 0.41 7.64 -51.93 -0.40 0.01 16 40 H 0.11 0.21 8.14 -51.93 -0.42 -0.21 16 41 H 0.38 -1.58 9.12 45.56 0.42 -1.17 16 42 H 0.12 -0.38 8.14 -51.93 -0.42 -0.80 16 43 H 0.09 -0.24 8.10 -51.93 -0.42 -0.66 16 LS Contribution 369.72 15.07 5.57 5.57 Total: 0.00 -10.81 369.72 -8.60 -19.41 By element: Atomic # 1 Polarization: -6.49 SS G_CDS: -4.62 Total: -11.11 kcal Atomic # 6 Polarization: 3.54 SS G_CDS: -2.67 Total: 0.87 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -0.25 Total: 0.06 kcal Atomic # 8 Polarization: -7.17 SS G_CDS: -1.55 Total: -8.72 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.08 Total: -6.09 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -10.81 -8.60 -19.41 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.877 kcal (2) G-P(sol) polarization free energy of solvation -10.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.690 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.600 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.413 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.290 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds