Wall clock time and date at job start Tue Mar 9 2021 12:58:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34232 * 116.99720 * 2 1 4 4 O 1.20827 * 120.00125 * 359.97438 * 3 2 1 5 5 C 1.50698 * 120.00075 * 179.97438 * 3 2 1 6 6 N 1.46502 * 112.84839 * 335.32786 * 5 3 2 7 7 C 1.34781 * 119.99873 * 293.45854 * 6 5 3 8 8 O 1.21286 * 119.99929 * 5.03472 * 7 6 5 9 9 C 1.50697 * 119.99922 * 185.03281 * 7 6 5 10 10 N 1.46506 * 109.46908 * 180.02562 * 9 7 6 11 11 C 1.35038 * 125.93071 * 124.99913 * 10 9 7 12 12 C 1.35082 * 107.97917 * 180.02562 * 11 10 9 13 13 C 1.50704 * 126.07867 * 180.02562 * 12 11 10 14 14 O 1.42895 * 109.47256 * 104.21470 * 13 12 11 15 15 Si 1.86303 * 109.46747 * 344.21831 * 13 12 11 16 16 C 1.40848 * 107.84884 * 359.97438 * 12 11 10 17 17 C 1.48417 * 126.03936 * 180.02562 * 16 12 11 18 18 C 1.39324 * 120.11837 * 319.53802 * 17 16 12 19 19 C 1.38032 * 119.87875 * 179.76742 * 18 17 16 20 20 C 1.38313 * 120.11707 * 0.48609 * 19 18 17 21 21 C 1.38319 * 120.24165 * 359.78579 * 20 19 18 22 22 C 1.38019 * 120.12217 * 359.95784 * 21 20 19 23 23 N 1.31622 * 107.92413 * 359.71959 * 16 12 11 24 24 C 1.53776 * 113.61503 * 204.13118 * 5 3 2 25 25 C 1.53793 * 87.07986 * 220.01943 * 24 5 3 26 26 H 1.08990 * 113.61333 * 139.98282 * 25 24 5 27 27 O 1.42904 * 113.61044 * 270.79815 * 25 24 5 28 28 C 1.53781 * 87.07998 * 25.43140 * 25 24 5 29 29 H 1.09007 * 109.47057 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47279 * 299.99979 * 1 2 3 31 31 H 1.08997 * 109.47287 * 60.00182 * 1 2 3 32 32 H 0.96993 * 120.00471 * 113.46004 * 6 5 3 33 33 H 1.08997 * 109.47217 * 299.99638 * 9 7 6 34 34 H 1.08993 * 109.47257 * 60.00331 * 9 7 6 35 35 H 1.08001 * 126.01194 * 0.02562 * 11 10 9 36 36 H 1.08995 * 109.47390 * 224.21855 * 13 12 11 37 37 H 0.96704 * 114.00373 * 180.02562 * 14 13 12 38 38 H 1.48498 * 110.00188 * 59.99726 * 15 13 12 39 39 H 1.48500 * 109.99778 * 181.32206 * 15 13 12 40 40 H 1.08003 * 120.06229 * 359.97438 * 18 17 16 41 41 H 1.08001 * 119.94074 * 180.27446 * 19 18 17 42 42 H 1.08002 * 119.87965 * 179.76450 * 20 19 18 43 43 H 1.08003 * 119.93534 * 179.97438 * 21 20 19 44 44 H 1.08003 * 120.05941 * 180.02562 * 22 21 20 45 45 H 1.08997 * 113.61750 * 105.46904 * 24 5 3 46 46 H 1.08997 * 113.61486 * 334.56596 * 24 5 3 47 47 H 0.96702 * 113.99806 * 178.46776 * 27 25 24 48 48 H 1.08991 * 113.61358 * 89.11840 * 28 25 24 49 49 H 1.09001 * 113.61448 * 220.02137 * 28 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1984 0.0798 0.5646 7 6 4.0463 -0.2096 1.8722 8 8 3.3129 0.4670 2.5617 9 6 4.7874 -1.3738 2.4774 10 7 4.4549 -1.4778 3.9004 11 6 3.9667 -2.5726 4.5222 12 6 3.7919 -2.2681 5.8266 13 6 3.2658 -3.1956 6.8916 14 8 4.3482 -3.6451 7.7090 15 14 2.4442 -4.6617 6.0877 16 6 4.1899 -0.9302 6.0148 17 6 4.1649 -0.1839 7.2974 18 6 3.0924 -0.3356 8.1737 19 6 3.0765 0.3573 9.3674 20 6 4.1178 1.2086 9.6897 21 6 5.1823 1.3672 8.8208 22 6 5.2110 0.6752 7.6269 23 7 4.5943 -0.4608 4.8535 24 6 4.1138 2.5915 0.5766 25 6 5.1640 2.5545 -0.5464 26 1 5.3653 3.5303 -0.9882 27 8 6.3554 1.8489 -0.1928 28 6 4.1608 1.7097 -1.3494 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8899 31 1 -0.3634 0.5138 -0.8900 32 1 4.7264 -0.5033 -0.0028 33 1 4.4973 -2.2932 1.9688 34 1 5.8605 -1.2195 2.3650 35 1 3.7534 -3.5242 4.0582 36 1 2.5402 -2.6657 7.5088 37 1 4.0825 -4.2476 8.4173 38 1 3.4230 -5.3926 5.2433 39 1 1.8930 -5.5680 7.1269 40 1 2.2765 -0.9966 7.9209 41 1 2.2477 0.2370 10.0494 42 1 4.0996 1.7517 10.6230 43 1 5.9927 2.0335 9.0773 44 1 6.0429 0.7995 6.9495 45 1 4.5384 2.4881 1.5751 46 1 3.4177 3.4263 0.4960 47 1 7.0101 1.8021 -0.9029 48 1 3.4776 2.3034 -1.9565 49 1 4.6234 0.8943 -1.9056 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:22 Heat of formation + Delta-G solvation = -34.432641 kcal Electronic energy + Delta-G solvation = -37019.685275 eV Core-core repulsion = 32110.659154 eV Total energy + Delta-G solvation = -4909.026121 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.53919 -42.20561 -40.53864 -39.77220 -39.43221 -37.68067 -37.40779 -36.27089 -34.76596 -33.97498 -32.25583 -31.77507 -31.27734 -29.41567 -28.61732 -27.25993 -26.61911 -25.78903 -24.05073 -23.26807 -22.68635 -22.06141 -21.41242 -20.71920 -20.49578 -19.20911 -18.75094 -18.44211 -18.22459 -18.14854 -17.75666 -17.40881 -17.23296 -16.74539 -16.52629 -16.04306 -15.94118 -15.67097 -15.50309 -15.43766 -15.10866 -14.96222 -14.66099 -14.34789 -14.31680 -14.14678 -14.10132 -13.91385 -13.74363 -13.60449 -13.44906 -13.33185 -13.26887 -13.06125 -12.62926 -12.52716 -12.24416 -12.05755 -12.01671 -11.81442 -11.72638 -11.55253 -11.41682 -11.25054 -11.11552 -10.50498 -10.22059 -10.16662 -9.66179 -9.60283 -9.11134 -4.93115 0.32236 0.67980 0.89005 1.10350 1.23614 1.35890 1.40634 1.59750 1.78417 1.87703 1.89614 1.98562 2.77427 3.05850 3.10683 3.17212 3.27836 3.43862 3.49806 3.64365 3.71563 3.75730 3.84824 3.94041 4.05787 4.10536 4.19430 4.23277 4.24463 4.29144 4.36471 4.37388 4.40683 4.43735 4.58304 4.62691 4.68050 4.68509 4.73235 4.90140 4.90381 4.98695 5.16566 5.21464 5.29522 5.40175 5.47079 5.75783 5.77930 5.81427 5.90404 6.21598 6.26364 6.45072 6.61540 6.73413 6.78136 7.06565 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.352 6.352 3 C 0.473 3.527 4 O -0.499 6.499 5 C 0.165 3.835 6 N -0.694 5.694 7 C 0.508 3.492 8 O -0.495 6.495 9 C 0.121 3.879 10 N -0.358 5.358 11 C 0.066 3.934 12 C -0.203 4.203 13 C -0.036 4.036 14 O -0.533 6.533 15 Si 0.676 3.324 16 C 0.131 3.869 17 C -0.004 4.004 18 C -0.097 4.097 19 C -0.121 4.121 20 C -0.115 4.115 21 C -0.121 4.121 22 C -0.091 4.091 23 N -0.246 5.246 24 C -0.116 4.116 25 C 0.086 3.914 26 H 0.085 0.915 27 O -0.544 6.544 28 C -0.155 4.155 29 H 0.102 0.898 30 H 0.064 0.936 31 H 0.063 0.937 32 H 0.409 0.591 33 H 0.129 0.871 34 H 0.121 0.879 35 H 0.178 0.822 36 H 0.073 0.927 37 H 0.375 0.625 38 H -0.254 1.254 39 H -0.259 1.259 40 H 0.126 0.874 41 H 0.125 0.875 42 H 0.123 0.877 43 H 0.125 0.875 44 H 0.123 0.877 45 H 0.096 0.904 46 H 0.120 0.880 47 H 0.384 0.616 48 H 0.113 0.887 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.634 -3.518 -5.927 6.921 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.268 6.268 3 C 0.314 3.686 4 O -0.385 6.385 5 C 0.076 3.924 6 N -0.349 5.349 7 C 0.292 3.708 8 O -0.367 6.367 9 C -0.005 4.005 10 N -0.139 5.139 11 C -0.078 4.078 12 C -0.214 4.214 13 C -0.147 4.147 14 O -0.339 6.339 15 Si 0.577 3.423 16 C -0.036 4.036 17 C -0.006 4.006 18 C -0.116 4.116 19 C -0.139 4.139 20 C -0.133 4.133 21 C -0.139 4.139 22 C -0.111 4.111 23 N -0.066 5.066 24 C -0.154 4.154 25 C 0.026 3.974 26 H 0.103 0.897 27 O -0.349 6.349 28 C -0.193 4.193 29 H 0.121 0.879 30 H 0.083 0.917 31 H 0.082 0.918 32 H 0.245 0.755 33 H 0.147 0.853 34 H 0.139 0.861 35 H 0.195 0.805 36 H 0.091 0.909 37 H 0.222 0.778 38 H -0.178 1.178 39 H -0.183 1.183 40 H 0.144 0.856 41 H 0.143 0.857 42 H 0.141 0.859 43 H 0.143 0.857 44 H 0.141 0.859 45 H 0.115 0.885 46 H 0.138 0.862 47 H 0.232 0.768 48 H 0.132 0.868 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 0.381 -2.293 -6.169 6.592 hybrid contribution 0.470 -1.257 0.497 1.431 sum 0.852 -3.550 -5.672 6.745 Atomic orbital electron populations 1.23308 0.76040 1.03879 1.02681 1.86493 1.23607 1.33152 1.83526 1.23684 0.91245 0.81756 0.71944 1.90686 1.66175 1.36450 1.45154 1.21059 0.84659 0.88396 0.98268 1.45271 1.54102 1.25991 1.09566 1.20520 0.82340 0.86147 0.81836 1.90850 1.35824 1.49961 1.60078 1.21448 1.02078 0.99680 0.77272 1.47771 1.50425 1.08941 1.06779 1.22201 0.99551 0.92856 0.93224 1.19237 1.14276 0.94750 0.93151 1.24079 0.92809 1.03467 0.94313 1.86649 1.33843 1.66908 1.46509 0.95322 0.84900 0.77771 0.84328 1.20589 0.98447 0.92387 0.92150 1.17709 0.95578 0.96674 0.90677 1.21148 0.97412 0.99318 0.93711 1.21065 0.98928 0.97185 0.96698 1.21244 0.94112 0.98369 0.99576 1.21101 0.98757 0.99786 0.94211 1.21191 0.97944 0.95210 0.96730 1.77799 1.22520 1.09966 0.96359 1.23433 0.96337 0.95052 1.00609 1.22618 0.84833 0.94526 0.95380 0.89689 1.86522 1.27927 1.77645 1.42840 1.24012 0.99698 1.01697 0.93925 0.87942 0.91726 0.91821 0.75455 0.85284 0.86095 0.80501 0.90877 0.77771 1.17847 1.18338 0.85637 0.85670 0.85902 0.85749 0.85861 0.88543 0.86177 0.76813 0.86846 0.88661 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 101.05 1.07 1.09 16 2 O -0.35 -0.90 10.26 -39.26 -0.40 -1.30 16 3 C 0.47 1.62 6.38 36.00 0.23 1.85 16 4 O -0.50 -3.00 15.80 -18.75 -0.30 -3.30 16 5 C 0.17 0.07 1.01 -132.16 -0.13 -0.07 16 6 N -0.69 0.83 4.43 -47.92 -0.21 0.62 16 7 C 0.51 0.77 7.32 -10.98 -0.08 0.68 16 8 O -0.50 -3.22 14.45 5.55 0.08 -3.13 16 9 C 0.12 -0.15 6.99 -5.19 -0.04 -0.19 16 10 N -0.36 -1.01 3.39 -62.58 -0.21 -1.22 16 11 C 0.07 0.12 9.96 -17.26 -0.17 -0.06 16 12 C -0.20 -0.70 5.37 -104.76 -0.56 -1.26 16 13 C -0.04 -0.05 2.48 36.01 0.09 0.04 16 14 O -0.53 -1.36 12.86 -35.23 -0.45 -1.81 16 15 Si 0.68 -0.41 30.80 -169.99 -5.24 -5.64 16 16 C 0.13 0.74 6.69 -82.78 -0.55 0.18 16 17 C 0.00 -0.02 5.76 -104.90 -0.60 -0.63 16 18 C -0.10 -0.32 8.90 -39.25 -0.35 -0.67 16 19 C -0.12 -0.27 10.03 -39.63 -0.40 -0.67 16 20 C -0.11 -0.26 10.04 -39.52 -0.40 -0.66 16 21 C -0.12 -0.37 10.03 -39.63 -0.40 -0.76 16 22 C -0.09 -0.43 9.77 -39.26 -0.38 -0.81 16 23 N -0.25 -1.53 11.68 33.43 0.39 -1.14 16 24 C -0.12 -0.14 6.73 -25.92 -0.17 -0.32 16 25 C 0.09 -0.19 5.27 -25.91 -0.14 -0.33 16 26 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 27 O -0.54 1.32 13.10 -35.23 -0.46 0.85 16 28 C -0.16 0.45 7.20 -25.92 -0.19 0.27 16 29 H 0.10 -0.21 8.14 -51.93 -0.42 -0.64 16 30 H 0.06 0.11 8.13 -51.93 -0.42 -0.31 16 31 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 32 H 0.41 -1.90 8.67 -40.82 -0.35 -2.25 16 33 H 0.13 -0.71 8.07 -51.93 -0.42 -1.12 16 34 H 0.12 -0.36 8.14 -51.93 -0.42 -0.79 16 35 H 0.18 -0.31 6.37 -52.49 -0.33 -0.64 16 36 H 0.07 0.02 5.37 -51.93 -0.28 -0.26 16 37 H 0.38 -0.57 8.74 45.56 0.40 -0.17 16 38 H -0.25 -0.36 7.03 56.52 0.40 0.04 16 39 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 40 H 0.13 0.20 5.97 -52.48 -0.31 -0.11 16 41 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 42 H 0.12 0.02 8.06 -52.49 -0.42 -0.41 16 43 H 0.12 0.13 8.06 -52.48 -0.42 -0.30 16 44 H 0.12 0.55 8.06 -52.48 -0.42 0.13 16 45 H 0.10 0.37 7.45 -51.93 -0.39 -0.02 16 46 H 0.12 0.20 7.38 -51.93 -0.38 -0.19 16 47 H 0.38 -2.54 9.12 45.56 0.42 -2.12 16 48 H 0.11 -0.34 8.09 -51.93 -0.42 -0.76 16 49 H 0.09 -0.48 8.10 -51.93 -0.42 -0.90 16 LS Contribution 417.65 15.07 6.29 6.29 Total: 0.00 -15.23 417.65 -9.19 -24.42 By element: Atomic # 1 Polarization: -6.83 SS G_CDS: -5.50 Total: -12.33 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -3.18 Total: -2.31 kcal Atomic # 7 Polarization: -1.71 SS G_CDS: -0.03 Total: -1.74 kcal Atomic # 8 Polarization: -7.15 SS G_CDS: -1.53 Total: -8.69 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.24 Total: -5.64 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -15.23 -9.19 -24.42 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.012 kcal (2) G-P(sol) polarization free energy of solvation -15.229 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.241 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.421 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.433 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds