Wall clock time and date at job start Tue Mar 9 2021 12:58:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34232 * 116.99720 * 2 1 4 4 O 1.20827 * 120.00125 * 359.97438 * 3 2 1 5 5 C 1.50698 * 120.00075 * 179.97438 * 3 2 1 6 6 N 1.46502 * 112.84839 * 335.32786 * 5 3 2 7 7 C 1.34781 * 119.99873 * 293.45854 * 6 5 3 8 8 O 1.21286 * 119.99929 * 5.03472 * 7 6 5 9 9 C 1.50697 * 119.99922 * 185.03281 * 7 6 5 10 10 N 1.46506 * 109.46908 * 180.02562 * 9 7 6 11 11 C 1.35038 * 125.93071 * 124.99913 * 10 9 7 12 12 C 1.35082 * 107.97917 * 180.02562 * 11 10 9 13 13 C 1.50704 * 126.07867 * 180.02562 * 12 11 10 14 14 O 1.42895 * 109.47256 * 104.21470 * 13 12 11 15 15 Si 1.86303 * 109.46747 * 344.21831 * 13 12 11 16 16 C 1.40848 * 107.84884 * 359.97438 * 12 11 10 17 17 C 1.48417 * 126.03936 * 180.02562 * 16 12 11 18 18 C 1.39324 * 120.11837 * 319.53802 * 17 16 12 19 19 C 1.38032 * 119.87875 * 179.76742 * 18 17 16 20 20 C 1.38313 * 120.11707 * 0.48609 * 19 18 17 21 21 C 1.38319 * 120.24165 * 359.78579 * 20 19 18 22 22 C 1.38019 * 120.12217 * 359.95784 * 21 20 19 23 23 N 1.31622 * 107.92413 * 359.71959 * 16 12 11 24 24 C 1.53776 * 113.61503 * 204.13118 * 5 3 2 25 25 C 1.53793 * 87.07986 * 220.01943 * 24 5 3 26 26 H 1.08990 * 113.61333 * 139.98282 * 25 24 5 27 27 O 1.42904 * 113.61044 * 270.79815 * 25 24 5 28 28 C 1.53781 * 87.07998 * 25.43140 * 25 24 5 29 29 H 1.09007 * 109.47057 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47279 * 299.99979 * 1 2 3 31 31 H 1.08997 * 109.47287 * 60.00182 * 1 2 3 32 32 H 0.96993 * 120.00471 * 113.46004 * 6 5 3 33 33 H 1.08997 * 109.47217 * 299.99638 * 9 7 6 34 34 H 1.08993 * 109.47257 * 60.00331 * 9 7 6 35 35 H 1.08001 * 126.01194 * 0.02562 * 11 10 9 36 36 H 1.08995 * 109.47390 * 224.21855 * 13 12 11 37 37 H 0.96704 * 114.00373 * 180.02562 * 14 13 12 38 38 H 1.48498 * 110.00188 * 59.99726 * 15 13 12 39 39 H 1.48500 * 109.99778 * 181.32206 * 15 13 12 40 40 H 1.08003 * 120.06229 * 359.97438 * 18 17 16 41 41 H 1.08001 * 119.94074 * 180.27446 * 19 18 17 42 42 H 1.08002 * 119.87965 * 179.76450 * 20 19 18 43 43 H 1.08003 * 119.93534 * 179.97438 * 21 20 19 44 44 H 1.08003 * 120.05941 * 180.02562 * 22 21 20 45 45 H 1.08997 * 113.61750 * 105.46904 * 24 5 3 46 46 H 1.08997 * 113.61486 * 334.56596 * 24 5 3 47 47 H 0.96702 * 113.99806 * 178.46776 * 27 25 24 48 48 H 1.08991 * 113.61358 * 89.11840 * 28 25 24 49 49 H 1.09001 * 113.61448 * 220.02137 * 28 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1984 0.0798 0.5646 7 6 4.0463 -0.2096 1.8722 8 8 3.3129 0.4670 2.5617 9 6 4.7874 -1.3738 2.4774 10 7 4.4549 -1.4778 3.9004 11 6 3.9667 -2.5726 4.5222 12 6 3.7919 -2.2681 5.8266 13 6 3.2658 -3.1956 6.8916 14 8 4.3482 -3.6451 7.7090 15 14 2.4442 -4.6617 6.0877 16 6 4.1899 -0.9302 6.0148 17 6 4.1649 -0.1839 7.2974 18 6 3.0924 -0.3356 8.1737 19 6 3.0765 0.3573 9.3674 20 6 4.1178 1.2086 9.6897 21 6 5.1823 1.3672 8.8208 22 6 5.2110 0.6752 7.6269 23 7 4.5943 -0.4608 4.8535 24 6 4.1138 2.5915 0.5766 25 6 5.1640 2.5545 -0.5464 26 1 5.3653 3.5303 -0.9882 27 8 6.3554 1.8489 -0.1928 28 6 4.1608 1.7097 -1.3494 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8899 31 1 -0.3634 0.5138 -0.8900 32 1 4.7264 -0.5033 -0.0028 33 1 4.4973 -2.2932 1.9688 34 1 5.8605 -1.2195 2.3650 35 1 3.7534 -3.5242 4.0582 36 1 2.5402 -2.6657 7.5088 37 1 4.0825 -4.2476 8.4173 38 1 3.4230 -5.3926 5.2433 39 1 1.8930 -5.5680 7.1269 40 1 2.2765 -0.9966 7.9209 41 1 2.2477 0.2370 10.0494 42 1 4.0996 1.7517 10.6230 43 1 5.9927 2.0335 9.0773 44 1 6.0429 0.7995 6.9495 45 1 4.5384 2.4881 1.5751 46 1 3.4177 3.4263 0.4960 47 1 7.0101 1.8021 -0.9029 48 1 3.4776 2.3034 -1.9565 49 1 4.6234 0.8943 -1.9056 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12808048_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:21 Heat of formation + Delta-G solvation = -43.174656 kcal Electronic energy + Delta-G solvation = -37020.064357 eV Core-core repulsion = 32110.659154 eV Total energy + Delta-G solvation = -4909.405203 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.63809 -42.33684 -40.69598 -39.90087 -39.53493 -37.78144 -37.62169 -36.19673 -34.89240 -33.99371 -32.41435 -31.94737 -31.46458 -29.51157 -28.69298 -27.19803 -26.63742 -25.89544 -24.23486 -23.47435 -22.76971 -22.09659 -21.53469 -20.88782 -20.53412 -19.30475 -18.73478 -18.52202 -18.30665 -18.27471 -17.79058 -17.50489 -17.39979 -16.77131 -16.59019 -16.17849 -16.05839 -15.74934 -15.63826 -15.42116 -15.19619 -15.01353 -14.75941 -14.46882 -14.44961 -14.33520 -14.21317 -13.91116 -13.80030 -13.61877 -13.53893 -13.38190 -13.34613 -13.14721 -12.70390 -12.44504 -12.35050 -12.20016 -12.15861 -11.98854 -11.91803 -11.62313 -11.54695 -11.27742 -11.06394 -10.67196 -10.27243 -10.24106 -9.89311 -9.80643 -9.30665 -4.86084 0.08481 0.44282 0.77256 0.90583 1.21930 1.33044 1.37979 1.63705 1.66693 1.71366 1.89620 1.98211 2.87595 2.91918 3.12005 3.25580 3.32564 3.46758 3.51550 3.60215 3.76838 3.79592 3.89177 3.92785 4.03872 4.10933 4.13204 4.18096 4.20752 4.23712 4.25447 4.34153 4.49890 4.51156 4.55362 4.59847 4.63916 4.71420 4.74238 4.74852 4.80829 4.87327 4.96933 5.09517 5.21924 5.23839 5.27275 5.54522 5.55085 5.59118 5.87073 6.01806 6.35978 6.53238 6.57131 6.70656 6.90532 7.08457 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.354 6.354 3 C 0.467 3.533 4 O -0.536 6.536 5 C 0.158 3.842 6 N -0.674 5.674 7 C 0.504 3.496 8 O -0.554 6.554 9 C 0.114 3.886 10 N -0.359 5.359 11 C 0.074 3.926 12 C -0.225 4.225 13 C -0.054 4.054 14 O -0.558 6.558 15 Si 0.767 3.233 16 C 0.108 3.892 17 C -0.026 4.026 18 C -0.106 4.106 19 C -0.122 4.122 20 C -0.119 4.119 21 C -0.127 4.127 22 C -0.115 4.115 23 N -0.291 5.291 24 C -0.131 4.131 25 C 0.101 3.899 26 H 0.102 0.898 27 O -0.557 6.557 28 C -0.136 4.136 29 H 0.133 0.867 30 H 0.046 0.954 31 H 0.067 0.933 32 H 0.429 0.571 33 H 0.180 0.820 34 H 0.141 0.859 35 H 0.215 0.785 36 H 0.077 0.923 37 H 0.389 0.611 38 H -0.274 1.274 39 H -0.284 1.284 40 H 0.137 0.863 41 H 0.151 0.849 42 H 0.148 0.852 43 H 0.140 0.860 44 H 0.111 0.889 45 H 0.061 0.939 46 H 0.105 0.895 47 H 0.404 0.596 48 H 0.116 0.884 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.935 -5.520 -7.418 9.294 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.269 6.269 3 C 0.309 3.691 4 O -0.425 6.425 5 C 0.068 3.932 6 N -0.331 5.331 7 C 0.290 3.710 8 O -0.430 6.430 9 C -0.009 4.009 10 N -0.140 5.140 11 C -0.072 4.072 12 C -0.236 4.236 13 C -0.163 4.163 14 O -0.367 6.367 15 Si 0.669 3.331 16 C -0.058 4.058 17 C -0.028 4.028 18 C -0.126 4.126 19 C -0.139 4.139 20 C -0.137 4.137 21 C -0.145 4.145 22 C -0.135 4.135 23 N -0.113 5.113 24 C -0.170 4.170 25 C 0.042 3.958 26 H 0.120 0.880 27 O -0.366 6.366 28 C -0.174 4.174 29 H 0.152 0.848 30 H 0.064 0.936 31 H 0.086 0.914 32 H 0.269 0.731 33 H 0.197 0.803 34 H 0.159 0.841 35 H 0.232 0.768 36 H 0.095 0.905 37 H 0.239 0.761 38 H -0.200 1.200 39 H -0.211 1.211 40 H 0.155 0.845 41 H 0.169 0.831 42 H 0.166 0.834 43 H 0.158 0.842 44 H 0.129 0.871 45 H 0.080 0.920 46 H 0.124 0.876 47 H 0.256 0.744 48 H 0.134 0.866 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 0.733 -4.304 -7.700 8.851 hybrid contribution 0.384 -0.610 0.994 1.228 sum 1.118 -4.914 -6.706 8.388 Atomic orbital electron populations 1.23503 0.75237 1.05700 1.01984 1.86488 1.24541 1.32748 1.83144 1.24383 0.92488 0.81443 0.70741 1.90658 1.67237 1.37562 1.47023 1.21236 0.83079 0.88403 1.00457 1.45114 1.53311 1.25579 1.09060 1.21071 0.81591 0.86209 0.82170 1.90837 1.38562 1.52035 1.61546 1.21926 1.02828 1.00660 0.75495 1.48068 1.49794 1.08454 1.07695 1.22763 0.97939 0.93640 0.92810 1.19601 1.15091 0.94321 0.94577 1.24501 0.92576 1.04839 0.94352 1.86601 1.34987 1.67658 1.47439 0.94247 0.82636 0.74163 0.82082 1.20892 0.99053 0.93654 0.92184 1.18003 0.96310 0.97176 0.91332 1.21375 0.97340 0.99846 0.94002 1.21429 0.99591 0.96384 0.96541 1.21586 0.93609 0.98307 1.00242 1.21355 0.99703 0.99703 0.93760 1.21264 0.98117 0.96482 0.97593 1.77701 1.24052 1.12094 0.97435 1.23434 0.97923 0.95504 1.00114 1.22454 0.84536 0.95661 0.93165 0.88024 1.86478 1.28249 1.77535 1.44378 1.24000 0.98795 1.02272 0.92286 0.84848 0.93551 0.91440 0.73105 0.80252 0.84142 0.76849 0.90492 0.76146 1.19988 1.21056 0.84500 0.83091 0.83434 0.84170 0.87073 0.92012 0.87646 0.74411 0.86572 0.85425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 113.37 1.20 1.25 16 2 O -0.35 -2.00 10.26 -51.43 -0.53 -2.53 16 3 C 0.47 3.88 6.38 71.24 0.45 4.33 16 4 O -0.54 -7.84 15.80 21.96 0.35 -7.50 16 5 C 0.16 0.22 1.01 3.38 0.00 0.22 16 6 N -0.67 1.86 4.43 -423.92 -1.88 -0.02 16 7 C 0.50 1.84 7.32 87.66 0.64 2.48 16 8 O -0.55 -8.67 14.45 -3.05 -0.04 -8.72 16 9 C 0.11 -0.38 6.99 85.63 0.60 0.22 16 10 N -0.36 -2.21 3.39 -351.92 -1.19 -3.41 16 11 C 0.07 0.24 9.96 83.47 0.83 1.07 16 12 C -0.22 -1.79 5.37 -19.95 -0.11 -1.90 16 13 C -0.05 -0.18 2.48 71.24 0.18 0.00 16 14 O -0.56 -3.34 12.86 -148.98 -1.92 -5.25 16 15 Si 0.77 -1.67 30.80 68.60 2.11 0.44 16 16 C 0.11 1.49 6.69 42.53 0.28 1.78 16 17 C -0.03 -0.34 5.76 -20.04 -0.12 -0.46 16 18 C -0.11 -0.89 8.90 22.48 0.20 -0.69 16 19 C -0.12 -0.60 10.03 22.24 0.22 -0.38 16 20 C -0.12 -0.59 10.04 22.31 0.22 -0.37 16 21 C -0.13 -0.99 10.03 22.24 0.22 -0.77 16 22 C -0.12 -1.44 9.77 22.48 0.22 -1.22 16 23 N -0.29 -4.41 11.68 -48.16 -0.56 -4.98 16 24 C -0.13 -0.61 6.73 31.12 0.21 -0.40 16 25 C 0.10 -0.49 5.27 31.12 0.16 -0.33 16 26 H 0.10 -0.81 8.14 -2.39 -0.02 -0.83 16 27 O -0.56 3.30 13.10 -148.98 -1.95 1.35 16 28 C -0.14 0.96 7.20 31.12 0.22 1.18 16 29 H 0.13 -0.66 8.14 -2.38 -0.02 -0.68 16 30 H 0.05 0.26 8.13 -2.39 -0.02 0.24 16 31 H 0.07 0.07 8.13 -2.39 -0.02 0.05 16 32 H 0.43 -4.85 8.67 -92.71 -0.80 -5.66 16 33 H 0.18 -2.54 8.07 -2.39 -0.02 -2.56 16 34 H 0.14 -1.01 8.14 -2.39 -0.02 -1.03 16 35 H 0.22 -1.22 6.37 -2.91 -0.02 -1.23 16 36 H 0.08 0.10 5.37 -2.39 -0.01 0.09 16 37 H 0.39 -0.92 8.74 -74.05 -0.65 -1.57 16 38 H -0.27 -0.31 7.03 99.48 0.70 0.39 16 39 H -0.28 -0.55 7.11 99.48 0.71 0.16 16 40 H 0.14 0.65 5.97 -2.91 -0.02 0.63 16 41 H 0.15 -0.14 8.06 -2.91 -0.02 -0.17 16 42 H 0.15 -0.08 8.06 -2.91 -0.02 -0.10 16 43 H 0.14 0.47 8.06 -2.91 -0.02 0.45 16 44 H 0.11 1.49 8.06 -2.91 -0.02 1.46 16 45 H 0.06 0.71 7.45 -2.39 -0.02 0.69 16 46 H 0.11 0.72 7.38 -2.39 -0.02 0.70 16 47 H 0.40 -6.20 9.12 -74.06 -0.68 -6.87 16 48 H 0.12 -0.80 8.09 -2.39 -0.02 -0.82 16 49 H 0.13 -1.71 8.10 -2.39 -0.02 -1.72 16 Total: 0.00 -41.96 417.65 -1.02 -42.97 By element: Atomic # 1 Polarization: -17.33 SS G_CDS: -1.05 Total: -18.38 kcal Atomic # 6 Polarization: 0.36 SS G_CDS: 5.65 Total: 6.02 kcal Atomic # 7 Polarization: -4.77 SS G_CDS: -3.64 Total: -8.40 kcal Atomic # 8 Polarization: -18.56 SS G_CDS: -4.09 Total: -22.65 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: 2.11 Total: 0.44 kcal Total: -41.96 -1.02 -42.97 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.200 kcal (2) G-P(sol) polarization free energy of solvation -41.959 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.975 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds