Wall clock time and date at job start Tue Mar 9 2021 12:59:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34232 * 116.99777 * 2 1 4 4 O 1.20825 * 120.00552 * 0.02562 * 3 2 1 5 5 C 1.50704 * 119.99471 * 180.02562 * 3 2 1 6 6 N 1.46494 * 112.85170 * 35.51364 * 5 3 2 7 7 C 1.34781 * 119.99901 * 66.90345 * 6 5 3 8 8 O 1.21273 * 119.99923 * 354.94952 * 7 6 5 9 9 C 1.50700 * 119.99735 * 174.94901 * 7 6 5 10 10 C 1.52999 * 109.47086 * 299.99953 * 9 7 6 11 11 O 1.42901 * 109.46848 * 180.02562 * 9 7 6 12 12 C 1.36026 * 116.99708 * 209.99791 * 11 9 7 13 13 C 1.38621 * 120.07189 * 89.99947 * 12 11 9 14 14 Cl 1.73599 * 120.01638 * 359.95567 * 13 12 11 15 15 C 1.38375 * 119.97468 * 179.97438 * 13 12 11 16 16 C 1.38214 * 120.13375 * 0.02562 * 15 13 12 17 17 C 1.50698 * 119.92230 * 180.02562 * 16 15 13 18 18 O 1.42905 * 109.47378 * 120.00099 * 17 16 15 19 19 Si 1.86297 * 109.47259 * 359.97438 * 17 16 15 20 20 C 1.38274 * 120.15522 * 0.27060 * 16 15 13 21 21 C 1.38559 * 120.01463 * 359.46016 * 20 16 15 22 22 O 1.35993 * 120.06306 * 180.26989 * 21 20 16 23 23 C 1.42905 * 117.00260 * 0.27258 * 22 21 20 24 24 C 1.53778 * 113.69027 * 264.24277 * 5 3 2 25 25 C 1.53784 * 87.08157 * 220.01139 * 24 5 3 26 26 H 1.09007 * 113.61332 * 139.98180 * 25 24 5 27 27 O 1.42892 * 113.68952 * 270.87239 * 25 24 5 28 28 C 1.53781 * 87.07933 * 25.43438 * 25 24 5 29 29 H 1.09005 * 109.47123 * 59.99483 * 1 2 3 30 30 H 1.08998 * 109.47216 * 179.97438 * 1 2 3 31 31 H 1.08999 * 109.47097 * 299.99887 * 1 2 3 32 32 H 0.97003 * 120.00315 * 246.90191 * 6 5 3 33 33 H 1.08993 * 109.47255 * 59.99707 * 9 7 6 34 34 H 1.09004 * 109.47332 * 299.99825 * 10 9 7 35 35 H 1.08995 * 109.47707 * 59.99680 * 10 9 7 36 36 H 1.09003 * 109.47319 * 180.02562 * 10 9 7 37 37 H 1.08007 * 119.93693 * 179.97438 * 15 13 12 38 38 H 1.09008 * 109.47462 * 239.99847 * 17 16 15 39 39 H 0.96694 * 113.99973 * 179.97438 * 18 17 16 40 40 H 1.48499 * 110.00080 * 298.67773 * 19 17 16 41 41 H 1.48495 * 110.00152 * 60.00135 * 19 17 16 42 42 H 1.07996 * 119.99047 * 179.70038 * 20 16 15 43 43 H 1.09003 * 109.46554 * 299.99856 * 23 22 21 44 44 H 1.08998 * 109.47260 * 59.99482 * 23 22 21 45 45 H 1.08997 * 109.47116 * 179.97438 * 23 22 21 46 46 H 1.09001 * 113.61713 * 334.55868 * 24 5 3 47 47 H 1.08998 * 113.61661 * 105.46312 * 24 5 3 48 48 H 0.96702 * 114.00034 * 277.53217 * 27 25 24 49 49 H 1.09001 * 113.61249 * 220.01928 * 28 25 24 50 50 H 1.08997 * 113.69119 * 89.12680 * 28 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1916 0.2074 -0.7852 7 6 4.0324 0.1728 -2.1232 8 8 3.2981 0.9700 -2.6672 9 6 4.7670 -0.8565 -2.9430 10 6 6.2747 -0.6772 -2.7546 11 8 4.4367 -0.6901 -4.3233 12 6 4.4577 -1.8052 -5.1020 13 6 3.3125 -2.5728 -5.2470 14 17 1.8497 -2.1123 -4.4336 15 6 3.3360 -3.7065 -6.0401 16 6 4.4995 -4.0760 -6.6881 17 6 4.5195 -5.3113 -7.5511 18 8 4.8638 -4.9512 -8.8905 19 14 2.8354 -6.1076 -7.5348 20 6 5.6466 -3.3177 -6.5424 21 6 5.6287 -2.1783 -5.7543 22 8 6.7549 -1.4287 -5.6148 23 6 7.9198 -1.8715 -6.3141 24 6 4.1765 1.4479 1.4003 25 6 5.1721 2.4293 0.7595 26 1 5.3799 3.3047 1.3750 27 8 6.3582 1.8036 0.2662 28 6 4.1096 2.6766 -0.3244 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 4.7202 -0.4745 -0.3419 33 1 4.4764 -1.8552 -2.6173 34 1 6.5654 0.3216 -3.0803 35 1 6.5270 -0.8037 -1.7018 36 1 6.8060 -1.4214 -3.3479 37 1 2.4435 -4.3043 -6.1523 38 1 5.2570 -6.0139 -7.1629 39 1 4.8961 -5.6988 -9.5028 40 1 2.4799 -6.5158 -6.1520 41 1 1.8205 -5.1602 -8.0615 42 1 6.5556 -3.6116 -7.0461 43 1 8.1894 -2.8714 -5.9741 44 1 7.7142 -1.8948 -7.3843 45 1 8.7440 -1.1859 -6.1176 46 1 3.5010 1.9164 2.1160 47 1 4.6439 0.5427 1.7879 48 1 7.0303 1.6455 0.9433 49 1 4.5229 2.7632 -1.3293 50 1 3.4151 3.4808 -0.0816 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12808048_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:19 Heat of formation + Delta-G solvation = -202.176226 kcal Electronic energy + Delta-G solvation = -40222.911363 eV Core-core repulsion = 34824.977401 eV Total energy + Delta-G solvation = -5397.933962 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 416.125 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.60797 -42.01527 -40.90141 -39.99535 -39.27879 -38.87858 -37.91055 -37.69006 -37.03098 -36.20480 -34.51103 -32.88531 -31.54895 -31.46521 -29.39363 -28.59002 -27.19426 -26.95690 -26.65093 -25.35083 -23.77301 -22.96840 -22.63811 -21.91154 -20.59840 -19.77564 -19.26894 -18.95501 -18.69011 -18.39172 -18.35451 -18.06816 -17.74564 -17.48286 -17.16419 -16.90213 -16.77284 -16.36069 -16.19925 -15.90815 -15.70001 -15.50985 -15.20661 -14.99932 -14.68985 -14.62419 -14.48147 -14.30919 -14.25796 -13.92816 -13.89742 -13.54887 -13.39880 -13.35895 -13.24063 -13.20351 -13.01283 -12.86457 -12.63726 -12.51426 -12.46741 -12.31644 -12.15919 -12.08686 -12.00439 -11.86767 -11.58558 -11.48217 -11.07439 -10.85003 -10.40630 -10.33609 -9.95950 -9.53024 -4.99321 -0.46826 -0.19227 0.67176 0.81903 1.21926 1.23995 1.47080 1.61135 1.63553 1.95586 2.02346 2.11693 2.50998 2.91811 3.09346 3.18771 3.30766 3.39486 3.49579 3.54094 3.62308 3.68889 3.70557 3.77175 3.90095 3.92111 4.02123 4.07615 4.10767 4.23360 4.23975 4.35779 4.41964 4.48422 4.50074 4.50585 4.62729 4.65277 4.68227 4.70846 4.71724 4.73937 4.74335 4.80891 4.96176 5.09237 5.15149 5.18176 5.19444 5.82216 6.19137 6.32911 6.46960 6.89240 6.93876 6.98481 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.358 6.358 3 C 0.464 3.536 4 O -0.531 6.531 5 C 0.153 3.847 6 N -0.672 5.672 7 C 0.522 3.478 8 O -0.556 6.556 9 C 0.077 3.923 10 C -0.153 4.153 11 O -0.308 6.308 12 C 0.053 3.947 13 C -0.024 4.024 14 Cl -0.053 7.053 15 C -0.158 4.158 16 C -0.030 4.030 17 C -0.070 4.070 18 O -0.560 6.560 19 Si 0.763 3.237 20 C -0.158 4.158 21 C 0.134 3.866 22 O -0.309 6.309 23 C 0.011 3.989 24 C -0.137 4.137 25 C 0.105 3.895 26 H 0.108 0.892 27 O -0.556 6.556 28 C -0.131 4.131 29 H 0.045 0.955 30 H 0.129 0.871 31 H 0.072 0.928 32 H 0.425 0.575 33 H 0.101 0.899 34 H 0.056 0.944 35 H 0.104 0.896 36 H 0.082 0.918 37 H 0.131 0.869 38 H 0.117 0.883 39 H 0.409 0.591 40 H -0.283 1.283 41 H -0.303 1.303 42 H 0.173 0.827 43 H 0.079 0.921 44 H 0.064 0.936 45 H 0.121 0.879 46 H 0.119 0.881 47 H 0.125 0.875 48 H 0.404 0.596 49 H 0.063 0.937 50 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.076 -10.637 3.760 15.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.273 6.273 3 C 0.307 3.693 4 O -0.419 6.419 5 C 0.064 3.936 6 N -0.329 5.329 7 C 0.309 3.691 8 O -0.432 6.432 9 C 0.018 3.982 10 C -0.210 4.210 11 O -0.224 6.224 12 C 0.007 3.993 13 C -0.052 4.052 14 Cl -0.024 7.024 15 C -0.176 4.176 16 C -0.031 4.031 17 C -0.180 4.180 18 O -0.370 6.370 19 Si 0.670 3.330 20 C -0.176 4.176 21 C 0.087 3.913 22 O -0.222 6.222 23 C -0.083 4.083 24 C -0.175 4.175 25 C 0.045 3.955 26 H 0.125 0.875 27 O -0.365 6.365 28 C -0.169 4.169 29 H 0.063 0.937 30 H 0.147 0.853 31 H 0.091 0.909 32 H 0.265 0.735 33 H 0.119 0.881 34 H 0.075 0.925 35 H 0.122 0.878 36 H 0.100 0.900 37 H 0.149 0.851 38 H 0.134 0.866 39 H 0.261 0.739 40 H -0.210 1.210 41 H -0.231 1.231 42 H 0.191 0.809 43 H 0.098 0.902 44 H 0.083 0.917 45 H 0.139 0.861 46 H 0.138 0.862 47 H 0.144 0.856 48 H 0.256 0.744 49 H 0.082 0.918 50 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 8.105 -8.738 3.503 12.422 hybrid contribution -0.383 0.289 0.557 0.735 sum 7.721 -8.449 4.061 12.145 Atomic orbital electron populations 1.23493 0.75380 1.05462 1.02186 1.86506 1.24501 1.33035 1.83303 1.24470 0.92640 0.81339 0.70881 1.90645 1.67270 1.37431 1.46594 1.21379 0.82947 0.91195 0.98118 1.45108 1.53365 1.29326 1.05080 1.20657 0.80802 0.84911 0.82776 1.90763 1.38325 1.42053 1.72077 1.22310 0.97110 0.98101 0.80659 1.22190 0.90454 1.03764 1.04585 1.86253 1.89365 1.27795 1.18966 1.17723 0.90617 0.90994 0.99941 1.21050 0.88366 0.96092 0.99666 1.98405 1.34052 1.92146 1.77748 1.20705 0.99065 0.96870 1.00962 1.19483 0.91685 0.96623 0.95312 1.24660 1.12896 0.95735 0.84726 1.86435 1.93071 1.39814 1.17699 0.94553 0.73449 0.83688 0.81314 1.21373 1.01087 0.94490 1.00687 1.19188 0.86350 0.90690 0.95083 1.86230 1.18025 1.49751 1.68216 1.23529 0.84733 1.03023 0.97010 1.24037 0.98858 1.03600 0.91006 1.22439 0.84572 0.95255 0.93224 0.87457 1.86484 1.27426 1.82093 1.40464 1.23461 0.97889 0.94253 1.01308 0.93655 0.85335 0.90899 0.73477 0.88101 0.92451 0.87763 0.89963 0.85146 0.86569 0.73929 1.21005 1.23108 0.80946 0.90223 0.91692 0.86060 0.86239 0.85639 0.74412 0.91777 0.87208 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.16 10.56 113.37 1.20 1.36 16 2 O -0.36 -3.52 10.41 -51.44 -0.54 -4.06 16 3 C 0.46 5.44 6.42 71.24 0.46 5.90 16 4 O -0.53 -9.37 15.66 21.97 0.34 -9.02 16 5 C 0.15 0.68 1.00 3.39 0.00 0.69 16 6 N -0.67 -1.86 4.39 -423.93 -1.86 -3.72 16 7 C 0.52 5.55 6.71 87.66 0.59 6.14 16 8 O -0.56 -11.83 15.22 16.03 0.24 -11.59 16 9 C 0.08 0.52 3.20 29.85 0.10 0.62 16 10 C -0.15 -0.12 9.00 71.98 0.65 0.53 16 11 O -0.31 -4.29 8.48 -67.44 -0.57 -4.86 16 12 C 0.05 0.57 5.56 22.58 0.13 0.70 16 13 C -0.02 -0.27 6.33 22.39 0.14 -0.13 16 14 Cl -0.05 -0.69 28.50 -2.72 -0.08 -0.77 16 15 C -0.16 -1.24 8.45 22.30 0.19 -1.05 16 16 C -0.03 -0.10 5.42 -19.86 -0.11 -0.21 16 17 C -0.07 0.25 2.81 71.24 0.20 0.45 16 18 O -0.56 2.09 12.75 -148.98 -1.90 0.20 16 19 Si 0.76 -2.08 29.78 68.60 2.04 -0.03 16 20 C -0.16 -0.31 8.60 22.35 0.19 -0.12 16 21 C 0.13 0.80 6.54 22.56 0.15 0.95 16 22 O -0.31 -1.11 8.18 -79.61 -0.65 -1.77 16 23 C 0.01 -0.06 9.81 113.37 1.11 1.06 16 24 C -0.14 0.75 7.20 31.12 0.22 0.98 16 25 C 0.10 -0.45 5.27 31.12 0.16 -0.29 16 26 H 0.11 -0.90 8.14 -2.38 -0.02 -0.91 16 27 O -0.56 3.12 13.09 -148.98 -1.95 1.17 16 28 C -0.13 -0.76 6.67 31.12 0.21 -0.56 16 29 H 0.04 0.43 8.13 -2.38 -0.02 0.41 16 30 H 0.13 -0.04 8.14 -2.39 -0.02 -0.06 16 31 H 0.07 0.29 8.13 -2.39 -0.02 0.27 16 32 H 0.43 -2.11 8.25 -92.71 -0.76 -2.88 16 33 H 0.10 0.32 7.91 -2.39 -0.02 0.30 16 34 H 0.06 0.30 8.14 -2.38 -0.02 0.28 16 35 H 0.10 -0.59 7.68 -2.39 -0.02 -0.61 16 36 H 0.08 0.00 6.27 -2.39 -0.01 -0.02 16 37 H 0.13 0.99 4.87 -2.91 -0.01 0.97 16 38 H 0.12 -1.16 7.96 -2.38 -0.02 -1.18 16 39 H 0.41 -5.88 8.74 -74.06 -0.65 -6.53 16 40 H -0.28 -0.70 7.11 99.48 0.71 0.00 16 41 H -0.30 -2.04 7.11 99.48 0.71 -1.33 16 42 H 0.17 -0.66 6.30 -2.91 -0.02 -0.68 16 43 H 0.08 -0.73 7.65 -2.39 -0.02 -0.75 16 44 H 0.06 -0.37 7.67 -2.39 -0.02 -0.38 16 45 H 0.12 -1.00 8.14 -2.39 -0.02 -1.02 16 46 H 0.12 -0.76 8.10 -2.39 -0.02 -0.78 16 47 H 0.13 -1.41 8.09 -2.39 -0.02 -1.43 16 48 H 0.40 -6.15 9.12 -74.06 -0.68 -6.82 16 49 H 0.06 0.78 7.42 -2.39 -0.02 0.76 16 50 H 0.11 0.81 7.34 -2.39 -0.02 0.79 16 Total: 0.00 -38.68 432.45 -0.33 -39.02 By element: Atomic # 1 Polarization: -20.58 SS G_CDS: -1.00 Total: -21.58 kcal Atomic # 6 Polarization: 11.43 SS G_CDS: 5.59 Total: 17.01 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: -1.86 Total: -3.72 kcal Atomic # 8 Polarization: -24.91 SS G_CDS: -5.02 Total: -29.93 kcal Atomic # 14 Polarization: -2.08 SS G_CDS: 2.04 Total: -0.03 kcal Atomic # 17 Polarization: -0.69 SS G_CDS: -0.08 Total: -0.77 kcal Total: -38.68 -0.33 -39.02 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -163.160 kcal (2) G-P(sol) polarization free energy of solvation -38.683 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -201.843 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.016 kcal (6) G-S(sol) free energy of system = (1) + (5) -202.176 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds