Wall clock time and date at job start Tue Mar 9 2021 12:59:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 N 1.46496 * 112.84401 * 23.80942 * 5 3 2 7 7 C 1.34786 * 120.00072 * 309.66254 * 6 5 3 8 8 O 1.21283 * 119.99722 * 0.02562 * 7 6 5 9 9 C 1.50702 * 120.00120 * 180.02562 * 7 6 5 10 10 O 1.42899 * 109.46942 * 179.97438 * 9 7 6 11 11 C 1.35900 * 116.99738 * 179.97438 * 10 9 7 12 12 C 1.38739 * 120.05611 * 359.73139 * 11 10 9 13 13 C 1.38147 * 119.94302 * 179.74202 * 12 11 10 14 14 C 1.38269 * 120.05251 * 0.50710 * 13 12 11 15 15 C 1.50699 * 119.94191 * 179.74750 * 14 13 12 16 16 O 1.42896 * 109.47498 * 120.01995 * 15 14 13 17 17 Si 1.86302 * 109.47261 * 0.02562 * 15 14 13 18 18 C 1.38261 * 120.11377 * 359.76594 * 14 13 12 19 19 C 1.38143 * 120.05743 * 359.97438 * 18 14 13 20 20 C 1.53774 * 113.61648 * 252.49913 * 5 3 2 21 21 C 1.53780 * 87.08081 * 220.01465 * 20 5 3 22 22 H 1.09002 * 113.61408 * 139.98196 * 21 20 5 23 23 O 1.42898 * 113.69284 * 270.87522 * 21 20 5 24 24 C 1.53776 * 113.61483 * 154.99796 * 5 3 2 25 25 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 26 26 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 28 28 H 0.97003 * 120.00554 * 129.66803 * 6 5 3 29 29 H 1.09001 * 109.46992 * 300.00458 * 9 7 6 30 30 H 1.08999 * 109.46891 * 60.00087 * 9 7 6 31 31 H 1.08001 * 120.02520 * 359.97438 * 12 11 10 32 32 H 1.07994 * 119.97496 * 180.27297 * 13 12 11 33 33 H 1.09004 * 109.46845 * 240.02068 * 15 14 13 34 34 H 0.96699 * 114.00606 * 179.97438 * 16 15 14 35 35 H 1.48500 * 110.00007 * 298.68336 * 17 15 14 36 36 H 1.48498 * 109.99938 * 59.99942 * 17 15 14 37 37 H 1.08006 * 119.97343 * 179.97438 * 18 14 13 38 38 H 1.08005 * 120.03157 * 179.97438 * 19 18 14 39 39 H 1.08999 * 113.61693 * 334.56682 * 20 5 3 40 40 H 1.09005 * 113.61024 * 105.47112 * 20 5 3 41 41 H 0.96698 * 113.99783 * 277.53222 * 23 21 20 42 42 H 1.08999 * 113.62182 * 254.53670 * 24 5 3 43 43 H 1.09000 * 113.61324 * 25.35588 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1992 0.0712 -0.5439 7 6 3.8374 -1.1449 -0.0892 8 8 2.9874 -1.2426 0.7704 9 6 4.4888 -2.3832 -0.6489 10 8 3.9412 -3.5391 -0.0117 11 6 4.4236 -4.7472 -0.4048 12 6 5.4000 -4.8190 -1.3879 13 6 5.8926 -6.0480 -1.7820 14 6 5.4059 -7.2064 -1.2051 15 6 5.9409 -8.5461 -1.6410 16 8 6.5240 -9.2138 -0.5202 17 14 7.2348 -8.2993 -2.9585 18 6 4.4288 -7.1379 -0.2292 19 6 3.9367 -5.9111 0.1722 20 6 4.1588 1.7306 1.3445 21 6 5.1632 2.5627 0.5299 22 1 5.3640 3.5454 0.9569 23 8 6.3551 1.8518 0.1892 24 6 4.1148 2.5823 -0.5950 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 -0.8900 28 1 4.8788 0.1493 -1.2317 29 1 4.3042 -2.4375 -1.7218 30 1 5.5627 -2.3428 -0.4666 31 1 5.7773 -3.9146 -1.8419 32 1 6.6558 -6.1042 -2.5440 33 1 5.1263 -9.1502 -2.0403 34 1 6.8894 -10.0848 -0.7275 35 1 6.6337 -7.6343 -4.1424 36 1 8.3511 -7.4770 -2.4263 37 1 4.0499 -8.0442 0.2196 38 1 3.1732 -5.8580 0.9342 39 1 3.4746 2.3338 1.9413 40 1 4.6205 0.9240 1.9140 41 1 7.0183 1.8360 0.8928 42 1 4.5409 2.4635 -1.5911 43 1 3.4180 3.4180 -0.5297 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:45 Heat of formation + Delta-G solvation = -151.455492 kcal Electronic energy + Delta-G solvation = -29691.430216 eV Core-core repulsion = 25285.252893 eV Total energy + Delta-G solvation = -4406.177323 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.134 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -42.44196 -41.37905 -40.36625 -39.78071 -38.76657 -37.29729 -37.18338 -36.20976 -34.08046 -32.44557 -31.82053 -29.96615 -28.81752 -27.26032 -26.58165 -26.04864 -24.09946 -22.78337 -22.30815 -21.71733 -20.48942 -19.53932 -19.07224 -18.80691 -18.39294 -18.02856 -17.75402 -17.40396 -17.21354 -16.93398 -16.76012 -16.62615 -15.69740 -15.62823 -15.52753 -15.35750 -15.06617 -14.76196 -14.47588 -14.35040 -14.06076 -13.92903 -13.81787 -13.71086 -13.48843 -13.39937 -13.30655 -12.86621 -12.58070 -12.44437 -12.14351 -12.04205 -11.97252 -11.82658 -11.62698 -11.55930 -11.06235 -10.74422 -10.32931 -10.23350 -10.04675 -9.19397 -4.99407 0.27244 0.29968 1.05287 1.27198 1.39408 1.56218 1.61135 1.82225 1.94607 2.44314 2.63015 2.72527 2.97347 3.24767 3.38858 3.40665 3.52829 3.68529 3.77052 3.79653 3.84660 3.91674 3.95048 4.12581 4.23297 4.31820 4.37455 4.39931 4.40751 4.43830 4.45916 4.54457 4.63778 4.65745 4.69725 4.75947 4.92249 5.14900 5.20976 5.23299 5.50060 5.51107 5.66522 6.20205 6.34467 6.40642 6.62414 6.80830 7.13262 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.315 6.315 3 C 0.467 3.533 4 O -0.508 6.508 5 C 0.163 3.837 6 N -0.700 5.700 7 C 0.512 3.488 8 O -0.472 6.472 9 C 0.044 3.956 10 O -0.286 6.286 11 C 0.135 3.865 12 C -0.204 4.204 13 C -0.083 4.083 14 C -0.113 4.113 15 C -0.067 4.067 16 O -0.546 6.546 17 Si 0.681 3.319 18 C -0.048 4.048 19 C -0.144 4.144 20 C -0.161 4.161 21 C 0.086 3.914 22 H 0.086 0.914 23 O -0.549 6.549 24 C -0.115 4.115 25 H 0.061 0.939 26 H 0.100 0.900 27 H 0.059 0.941 28 H 0.412 0.588 29 H 0.093 0.907 30 H 0.095 0.905 31 H 0.132 0.868 32 H 0.120 0.880 33 H 0.074 0.926 34 H 0.382 0.618 35 H -0.256 1.256 36 H -0.251 1.251 37 H 0.136 0.864 38 H 0.138 0.862 39 H 0.107 0.893 40 H 0.092 0.908 41 H 0.388 0.612 42 H 0.095 0.905 43 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.519 -1.621 -3.122 5.727 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.229 6.229 3 C 0.309 3.691 4 O -0.396 6.396 5 C 0.074 3.926 6 N -0.357 5.357 7 C 0.296 3.704 8 O -0.342 6.342 9 C -0.035 4.035 10 O -0.198 6.198 11 C 0.090 3.910 12 C -0.223 4.223 13 C -0.100 4.100 14 C -0.113 4.113 15 C -0.177 4.177 16 O -0.353 6.353 17 Si 0.583 3.417 18 C -0.066 4.066 19 C -0.162 4.162 20 C -0.200 4.200 21 C 0.026 3.974 22 H 0.104 0.896 23 O -0.355 6.355 24 C -0.153 4.153 25 H 0.080 0.920 26 H 0.119 0.881 27 H 0.077 0.923 28 H 0.249 0.751 29 H 0.111 0.889 30 H 0.113 0.887 31 H 0.149 0.851 32 H 0.138 0.862 33 H 0.092 0.908 34 H 0.229 0.771 35 H -0.181 1.181 36 H -0.176 1.176 37 H 0.154 0.846 38 H 0.156 0.844 39 H 0.126 0.874 40 H 0.110 0.890 41 H 0.237 0.763 42 H 0.114 0.886 43 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 3.417 -0.356 -3.084 4.617 hybrid contribution 0.057 0.419 0.253 0.493 sum 3.474 0.063 -2.831 4.482 Atomic orbital electron populations 1.23307 0.77327 1.03769 1.02087 1.86985 1.22509 1.31230 1.82223 1.23606 0.91007 0.82266 0.72269 1.90684 1.66218 1.36644 1.46021 1.21047 0.85481 0.87235 0.98849 1.45329 1.43465 1.03384 1.43542 1.19972 0.83119 0.83768 0.83519 1.90825 1.28763 1.85703 1.28937 1.22390 0.98852 0.84033 0.98177 1.86162 1.61250 1.11384 1.60980 1.19035 0.93157 0.85165 0.93689 1.21119 1.01168 0.98759 1.01269 1.20636 0.98418 0.92008 0.98971 1.19264 0.99143 0.93006 0.99889 1.24607 1.03510 0.93027 0.96581 1.86493 1.79092 1.35629 1.34040 0.95346 0.80089 0.88802 0.77467 1.20838 0.94195 0.97170 0.94363 1.20536 1.03208 0.89527 1.02943 1.24096 0.99366 1.01353 0.95192 1.22598 0.84785 0.94713 0.95281 0.89611 1.86388 1.27516 1.77000 1.44631 1.23447 0.96845 0.94922 1.00053 0.91974 0.88140 0.92263 0.75099 0.88881 0.88727 0.85060 0.86233 0.90826 0.77058 1.18086 1.17596 0.84570 0.84418 0.87443 0.88977 0.76338 0.88625 0.85413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 10.56 101.05 1.07 1.14 16 2 O -0.32 -1.52 6.35 -47.59 -0.30 -1.82 16 3 C 0.47 1.86 7.04 36.01 0.25 2.12 16 4 O -0.51 -2.88 15.81 -18.75 -0.30 -3.18 16 5 C 0.16 0.12 1.11 -132.16 -0.15 -0.03 16 6 N -0.70 0.31 4.77 -47.93 -0.23 0.08 16 7 C 0.51 0.99 7.24 -10.98 -0.08 0.91 16 8 O -0.47 -2.81 13.08 -26.06 -0.34 -3.15 16 9 C 0.04 0.00 5.22 36.01 0.19 0.19 16 10 O -0.29 -0.98 9.67 -39.34 -0.38 -1.36 16 11 C 0.14 0.40 6.69 -39.21 -0.26 0.13 16 12 C -0.20 -0.34 9.04 -39.43 -0.36 -0.70 16 13 C -0.08 -0.19 8.66 -39.60 -0.34 -0.54 16 14 C -0.11 -0.27 5.42 -104.60 -0.57 -0.84 16 15 C -0.07 0.00 2.81 36.01 0.10 0.10 16 16 O -0.55 -0.12 12.74 -35.23 -0.45 -0.57 16 17 Si 0.68 -0.76 29.78 -169.99 -5.06 -5.82 16 18 C -0.05 -0.11 9.60 -39.61 -0.38 -0.49 16 19 C -0.14 -0.40 9.99 -39.43 -0.39 -0.79 16 20 C -0.16 0.08 7.25 -25.92 -0.19 -0.11 16 21 C 0.09 -0.21 5.27 -25.92 -0.14 -0.35 16 22 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 23 O -0.55 1.52 12.97 -35.23 -0.46 1.07 16 24 C -0.12 0.17 7.07 -25.92 -0.18 -0.01 16 25 H 0.06 0.16 8.13 -51.93 -0.42 -0.26 16 26 H 0.10 0.10 8.14 -51.93 -0.42 -0.32 16 27 H 0.06 0.11 8.13 -51.93 -0.42 -0.31 16 28 H 0.41 -1.21 8.48 -40.82 -0.35 -1.56 16 29 H 0.09 -0.21 7.65 -51.93 -0.40 -0.61 16 30 H 0.09 -0.22 7.68 -51.93 -0.40 -0.62 16 31 H 0.13 -0.14 6.30 -52.49 -0.33 -0.47 16 32 H 0.12 0.18 4.87 -52.49 -0.26 -0.08 16 33 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 34 H 0.38 -1.84 8.74 45.56 0.40 -1.45 16 35 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 36 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 37 H 0.14 0.11 8.06 -52.48 -0.42 -0.31 16 38 H 0.14 0.25 8.06 -52.48 -0.42 -0.17 16 39 H 0.11 -0.04 8.09 -51.93 -0.42 -0.46 16 40 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 41 H 0.39 -2.32 9.12 45.56 0.42 -1.91 16 42 H 0.10 -0.23 8.11 -51.93 -0.42 -0.65 16 43 H 0.13 -0.16 7.39 -51.93 -0.38 -0.54 16 LS Contribution 363.55 15.07 5.48 5.48 Total: 0.00 -11.80 363.55 -8.18 -19.98 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -4.71 Total: -11.42 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -1.43 Total: 0.72 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.23 Total: 0.08 kcal Atomic # 8 Polarization: -6.80 SS G_CDS: -2.23 Total: -9.02 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.06 Total: -5.82 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -11.80 -8.18 -19.98 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.476 kcal (2) G-P(sol) polarization free energy of solvation -11.804 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.280 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.979 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds