Wall clock time and date at job start Tue Mar 9 2021 12:59:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34224 * 116.99933 * 2 1 4 4 O 1.20830 * 120.00076 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00108 * 180.02562 * 3 2 1 6 6 N 1.46503 * 112.84847 * 324.06424 * 5 3 2 7 7 C 1.34774 * 120.00233 * 293.63930 * 6 5 3 8 8 O 1.21280 * 119.99630 * 354.98380 * 7 6 5 9 9 C 1.50700 * 119.99987 * 174.71350 * 7 6 5 10 10 C 1.52998 * 109.46921 * 180.02562 * 9 7 6 11 11 O 1.42900 * 109.47329 * 179.97438 * 10 9 7 12 12 C 1.35892 * 117.00600 * 179.97438 * 11 10 9 13 13 C 1.38734 * 120.05547 * 359.73015 * 12 11 10 14 14 C 1.38147 * 119.94855 * 179.69526 * 13 12 11 15 15 C 1.38266 * 120.04839 * 0.59744 * 14 13 12 16 16 C 1.50701 * 119.94126 * 179.69663 * 15 14 13 17 17 O 1.42900 * 109.47167 * 119.97890 * 16 15 14 18 18 Si 1.86305 * 109.47228 * 359.97438 * 16 15 14 19 19 C 1.38265 * 120.11867 * 359.68061 * 15 14 13 20 20 C 1.38151 * 120.04997 * 0.02562 * 19 15 14 21 21 C 1.53783 * 113.61653 * 192.86826 * 5 3 2 22 22 C 1.53777 * 87.07991 * 270.79824 * 21 5 3 23 23 H 1.09008 * 113.61232 * 89.11684 * 22 21 5 24 24 O 1.42901 * 113.61768 * 219.93155 * 22 21 5 25 25 C 1.53780 * 87.08567 * 334.56696 * 22 21 5 26 26 H 1.08999 * 109.47622 * 59.99618 * 1 2 3 27 27 H 1.08998 * 109.47175 * 179.97438 * 1 2 3 28 28 H 1.09005 * 109.46766 * 299.99515 * 1 2 3 29 29 H 0.97003 * 119.99739 * 113.64117 * 6 5 3 30 30 H 1.09001 * 109.46710 * 299.99560 * 9 7 6 31 31 H 1.08995 * 109.47181 * 60.00175 * 9 7 6 32 32 H 1.09007 * 109.47053 * 299.99694 * 10 9 7 33 33 H 1.09000 * 109.47305 * 59.99566 * 10 9 7 34 34 H 1.08007 * 120.02464 * 359.97438 * 13 12 11 35 35 H 1.07997 * 119.97632 * 180.27570 * 14 13 12 36 36 H 1.08998 * 109.47601 * 239.98211 * 16 15 14 37 37 H 0.96708 * 114.00061 * 300.00198 * 17 16 15 38 38 H 1.48493 * 110.00076 * 58.67385 * 18 16 15 39 39 H 1.48498 * 110.00166 * 179.97438 * 18 16 15 40 40 H 1.07988 * 119.97580 * 180.02562 * 19 15 14 41 41 H 1.08001 * 120.02578 * 180.02562 * 20 19 15 42 42 H 1.08998 * 113.61520 * 25.35134 * 21 5 3 43 43 H 1.09004 * 113.61294 * 156.25382 * 21 5 3 44 44 H 0.96700 * 114.00148 * 180.02562 * 24 22 21 45 45 H 1.08996 * 113.61465 * 270.88598 * 25 22 21 46 46 H 1.08998 * 113.61474 * 139.97229 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1919 0.2129 0.7913 7 6 4.0242 0.1813 2.1282 8 8 3.4326 1.0808 2.6865 9 6 4.5666 -0.9748 2.9285 10 6 4.2426 -0.7665 4.4092 11 8 4.7564 -1.8629 5.1681 12 6 4.5529 -1.8328 6.5113 13 6 3.8775 -0.7669 7.0880 14 6 3.6663 -0.7416 8.4530 15 6 4.1382 -1.7714 9.2458 16 6 3.9125 -1.7380 10.7354 17 8 3.1557 -2.8847 11.1284 18 14 2.9766 -0.1917 11.1872 19 6 4.8167 -2.8320 8.6743 20 6 5.0251 -2.8649 7.3090 21 6 4.1097 2.6788 0.3133 22 6 4.0435 2.9565 -1.1978 23 1 3.0853 3.3595 -1.5261 24 8 5.1578 3.7021 -1.6922 25 6 4.1759 1.4382 -1.4030 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8901 29 1 4.7269 -0.4676 0.3533 30 1 4.1087 -1.9019 2.5837 31 1 5.6471 -1.0324 2.7972 32 1 4.7002 0.1608 4.7543 33 1 3.1621 -0.7090 4.5401 34 1 3.5132 0.0402 6.4697 35 1 3.1367 0.0857 8.9019 36 1 4.8739 -1.7437 11.2490 37 1 2.2863 -2.9448 10.7093 38 1 1.6775 -0.1561 10.4688 39 1 2.7471 -0.1470 12.6536 40 1 5.1839 -3.6353 9.2957 41 1 5.5547 -3.6937 6.8630 42 1 3.4249 3.2909 0.9002 43 1 5.1240 2.6752 0.7125 44 1 5.1216 3.8801 -2.6420 45 1 5.2082 1.0954 -1.4729 46 1 3.5445 1.0488 -2.2015 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:48 Heat of formation + Delta-G solvation = -170.568408 kcal Electronic energy + Delta-G solvation = -30954.912255 eV Core-core repulsion = 26392.368514 eV Total energy + Delta-G solvation = -4562.543741 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.58386 -41.32155 -40.64859 -39.78170 -39.11363 -37.50911 -37.24772 -36.56785 -34.33062 -33.23450 -31.99830 -31.39351 -29.29777 -27.26196 -27.05903 -26.22284 -25.30507 -23.66036 -23.03439 -22.18515 -21.52868 -20.74719 -19.54941 -19.40476 -18.42504 -18.29947 -18.00255 -17.88925 -17.50851 -17.33360 -17.08374 -16.84653 -16.33201 -16.14749 -15.93125 -15.68488 -15.64230 -15.12401 -14.69708 -14.64927 -14.46897 -14.36678 -14.23189 -14.17545 -13.94602 -13.69254 -13.42231 -13.37165 -13.20454 -12.94113 -12.88217 -12.60003 -12.16887 -12.04316 -11.95224 -11.88217 -11.82018 -11.78784 -11.54836 -11.19565 -11.05147 -10.55497 -10.45419 -9.99296 -9.16783 -4.92792 0.33160 0.35480 0.88895 1.25810 1.32919 1.47851 1.60209 1.62816 1.99451 2.29611 2.70199 2.88299 3.01651 3.26437 3.38753 3.41352 3.42228 3.55770 3.71895 3.76960 3.81355 3.84253 3.96408 4.00473 4.07373 4.16821 4.23528 4.28405 4.30370 4.38852 4.41220 4.50671 4.52998 4.57591 4.57688 4.60367 4.75166 4.77680 4.88757 4.99514 5.06747 5.21796 5.25008 5.32723 5.53207 5.74582 6.11613 6.36200 6.44219 6.51315 6.56874 6.90987 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.351 6.351 3 C 0.478 3.522 4 O -0.488 6.488 5 C 0.156 3.844 6 N -0.708 5.708 7 C 0.524 3.476 8 O -0.525 6.525 9 C -0.139 4.139 10 C 0.073 3.927 11 O -0.316 6.316 12 C 0.138 3.862 13 C -0.203 4.203 14 C -0.075 4.075 15 C -0.157 4.157 16 C -0.069 4.069 17 O -0.531 6.531 18 Si 0.680 3.320 19 C -0.053 4.053 20 C -0.151 4.151 21 C -0.103 4.103 22 C 0.080 3.920 23 H 0.096 0.904 24 O -0.551 6.551 25 C -0.155 4.155 26 H 0.066 0.934 27 H 0.105 0.895 28 H 0.065 0.935 29 H 0.412 0.588 30 H 0.111 0.889 31 H 0.110 0.890 32 H 0.075 0.925 33 H 0.072 0.928 34 H 0.134 0.866 35 H 0.129 0.871 36 H 0.118 0.882 37 H 0.376 0.624 38 H -0.261 1.261 39 H -0.257 1.257 40 H 0.133 0.867 41 H 0.134 0.866 42 H 0.097 0.903 43 H 0.109 0.891 44 H 0.384 0.616 45 H 0.118 0.882 46 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.134 -1.813 -5.644 6.301 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.267 6.267 3 C 0.318 3.682 4 O -0.373 6.373 5 C 0.067 3.933 6 N -0.363 5.363 7 C 0.310 3.690 8 O -0.401 6.401 9 C -0.179 4.179 10 C -0.002 4.002 11 O -0.229 6.229 12 C 0.092 3.908 13 C -0.221 4.221 14 C -0.093 4.093 15 C -0.157 4.157 16 C -0.179 4.179 17 O -0.337 6.337 18 Si 0.582 3.418 19 C -0.071 4.071 20 C -0.169 4.169 21 C -0.142 4.142 22 C 0.020 3.980 23 H 0.114 0.886 24 O -0.357 6.357 25 C -0.193 4.193 26 H 0.084 0.916 27 H 0.123 0.877 28 H 0.084 0.916 29 H 0.248 0.752 30 H 0.129 0.871 31 H 0.129 0.871 32 H 0.093 0.907 33 H 0.091 0.909 34 H 0.152 0.848 35 H 0.146 0.854 36 H 0.135 0.865 37 H 0.223 0.777 38 H -0.186 1.186 39 H -0.182 1.182 40 H 0.151 0.849 41 H 0.152 0.848 42 H 0.115 0.885 43 H 0.127 0.873 44 H 0.232 0.768 45 H 0.136 0.864 46 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 1.508 -0.816 -4.014 4.365 hybrid contribution -1.038 -1.191 -1.129 1.942 sum 0.471 -2.007 -5.142 5.540 Atomic orbital electron populations 1.23369 0.75552 1.04156 1.02904 1.86487 1.23918 1.32710 1.83606 1.23120 0.90590 0.81913 0.72566 1.90708 1.66044 1.36337 1.44210 1.21019 0.85886 0.90942 0.95453 1.45720 1.53539 1.30349 1.06663 1.20436 0.79237 0.87207 0.82099 1.90791 1.41206 1.37950 1.70105 1.21443 1.04517 0.98284 0.93635 1.22423 0.99737 0.88756 0.89295 1.85968 1.75210 1.45643 1.16105 1.18984 0.94916 0.94514 0.82344 1.21269 1.04939 0.99826 0.96107 1.20806 0.97973 0.97381 0.93111 1.20183 1.02810 0.96671 0.96052 1.24932 1.01646 0.98410 0.92884 1.86591 1.32707 1.43898 1.70540 0.95055 0.83069 0.83123 0.80569 1.20832 0.95513 0.97274 0.93515 1.20505 1.04500 0.98978 0.92932 1.23312 1.03329 0.91649 0.95865 1.23231 0.90625 0.88861 0.95248 0.88604 1.86538 1.44461 1.75620 1.29042 1.24066 1.03178 0.99106 0.92986 0.91564 0.87683 0.91586 0.75152 0.87094 0.87135 0.90687 0.90943 0.84818 0.85354 0.86456 0.77686 1.18586 1.18241 0.84877 0.84849 0.88454 0.87253 0.76847 0.86412 0.89433 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.35 -0.50 10.42 -39.24 -0.41 -0.91 16 3 C 0.48 1.14 6.45 36.00 0.23 1.37 16 4 O -0.49 -2.40 15.11 -18.75 -0.28 -2.69 16 5 C 0.16 -0.03 1.11 -132.15 -0.15 -0.18 16 6 N -0.71 1.42 5.13 -47.92 -0.25 1.17 16 7 C 0.52 -0.04 7.48 -10.99 -0.08 -0.12 16 8 O -0.53 -2.04 15.02 5.56 0.08 -1.95 16 9 C -0.14 0.33 6.07 -27.88 -0.17 0.16 16 10 C 0.07 -0.02 4.03 37.16 0.15 0.13 16 11 O -0.32 -0.39 10.14 -19.40 -0.20 -0.58 16 12 C 0.14 0.24 6.69 -39.22 -0.26 -0.03 16 13 C -0.20 -0.23 9.04 -39.43 -0.36 -0.59 16 14 C -0.08 -0.05 8.66 -39.60 -0.34 -0.39 16 15 C -0.16 -0.13 5.39 -104.60 -0.56 -0.69 16 16 C -0.07 -0.02 2.82 36.01 0.10 0.08 16 17 O -0.53 -0.89 12.77 -35.23 -0.45 -1.34 16 18 Si 0.68 -0.17 29.78 -169.99 -5.06 -5.23 16 19 C -0.05 -0.05 9.60 -39.60 -0.38 -0.43 16 20 C -0.15 -0.19 9.99 -39.43 -0.39 -0.58 16 21 C -0.10 -0.10 6.15 -25.92 -0.16 -0.26 16 22 C 0.08 -0.05 4.82 -25.92 -0.12 -0.18 16 23 H 0.10 -0.03 7.63 -51.92 -0.40 -0.43 16 24 O -0.55 0.27 13.67 -35.23 -0.48 -0.21 16 25 C -0.16 0.42 7.22 -25.92 -0.19 0.23 16 26 H 0.07 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 28 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 29 H 0.41 -2.16 8.71 -40.82 -0.36 -2.51 16 30 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 31 H 0.11 -0.46 8.14 -51.93 -0.42 -0.89 16 32 H 0.07 0.00 7.61 -51.92 -0.40 -0.40 16 33 H 0.07 0.03 7.63 -51.93 -0.40 -0.37 16 34 H 0.13 0.02 6.30 -52.48 -0.33 -0.31 16 35 H 0.13 -0.13 4.87 -52.49 -0.26 -0.38 16 36 H 0.12 -0.05 7.96 -51.93 -0.41 -0.47 16 37 H 0.38 -0.38 8.70 45.56 0.40 0.02 16 38 H -0.26 -0.48 7.11 56.52 0.40 -0.07 16 39 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 40 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 41 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 42 H 0.10 0.31 7.64 -51.93 -0.40 -0.09 16 43 H 0.11 0.08 8.14 -51.93 -0.42 -0.34 16 44 H 0.38 -1.81 9.12 45.56 0.42 -1.39 16 45 H 0.12 -0.49 8.14 -51.93 -0.42 -0.91 16 46 H 0.09 -0.31 8.10 -51.93 -0.42 -0.73 16 LS Contribution 389.68 15.07 5.87 5.87 Total: 0.00 -10.87 389.68 -8.34 -19.21 By element: Atomic # 1 Polarization: -7.38 SS G_CDS: -5.55 Total: -12.93 kcal Atomic # 6 Polarization: 1.19 SS G_CDS: -1.62 Total: -0.42 kcal Atomic # 7 Polarization: 1.42 SS G_CDS: -0.25 Total: 1.17 kcal Atomic # 8 Polarization: -5.94 SS G_CDS: -1.74 Total: -7.67 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.06 Total: -5.23 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -10.87 -8.34 -19.21 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.356 kcal (2) G-P(sol) polarization free energy of solvation -10.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -162.226 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.342 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.213 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.568 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds