Wall clock time and date at job start Tue Mar 9 2021 12:59:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34235 * 117.00047 * 2 1 4 4 O 1.20824 * 119.99956 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00067 * 179.97438 * 3 2 1 6 6 N 1.46509 * 112.85004 * 35.51338 * 5 3 2 7 7 C 1.34769 * 119.99780 * 66.99133 * 6 5 3 8 8 O 1.21290 * 120.00193 * 354.95139 * 7 6 5 9 9 C 1.50701 * 120.00187 * 174.95448 * 7 6 5 10 10 C 1.53000 * 109.47500 * 179.97438 * 9 7 6 11 11 C 1.52996 * 109.46956 * 179.97438 * 10 9 7 12 12 O 1.42900 * 109.47183 * 180.02562 * 11 10 9 13 13 C 1.35896 * 117.00387 * 180.02562 * 12 11 10 14 14 C 1.38706 * 120.05864 * 180.02562 * 13 12 11 15 15 C 1.38166 * 119.94872 * 179.97438 * 14 13 12 16 16 C 1.50704 * 119.97657 * 180.02562 * 15 14 13 17 17 O 1.42899 * 109.46739 * 299.99998 * 16 15 14 18 18 Si 1.86304 * 109.47074 * 180.02562 * 16 15 14 19 19 C 1.38247 * 120.05306 * 0.02562 * 15 14 13 20 20 C 1.38285 * 120.11058 * 359.97438 * 19 15 14 21 21 C 1.38119 * 120.05872 * 0.02562 * 20 19 15 22 22 C 1.53780 * 113.69086 * 264.24584 * 5 3 2 23 23 C 1.53789 * 87.07948 * 220.00716 * 22 5 3 24 24 H 1.08999 * 113.69098 * 139.99021 * 23 22 5 25 25 O 1.42897 * 113.61376 * 270.88266 * 23 22 5 26 26 C 1.53777 * 113.61240 * 166.70742 * 5 3 2 27 27 H 1.08996 * 109.46959 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.46694 * 299.99985 * 1 2 3 29 29 H 1.08994 * 109.47241 * 59.99998 * 1 2 3 30 30 H 0.96993 * 119.99770 * 246.99174 * 6 5 3 31 31 H 1.09001 * 109.47312 * 59.99367 * 9 7 6 32 32 H 1.09000 * 109.46781 * 300.00196 * 9 7 6 33 33 H 1.09002 * 109.46841 * 60.00122 * 10 9 7 34 34 H 1.09000 * 109.47375 * 299.99969 * 10 9 7 35 35 H 1.09002 * 109.46939 * 60.00558 * 11 10 9 36 36 H 1.09000 * 109.47817 * 300.00079 * 11 10 9 37 37 H 1.08004 * 120.02894 * 359.95420 * 14 13 12 38 38 H 1.08996 * 109.46643 * 60.00001 * 16 15 14 39 39 H 0.96705 * 113.99921 * 179.97438 * 17 16 15 40 40 H 1.48503 * 109.99728 * 60.00195 * 18 16 15 41 41 H 1.48501 * 109.99650 * 181.31885 * 18 16 15 42 42 H 1.08002 * 119.94603 * 180.02562 * 19 15 14 43 43 H 1.08006 * 119.97093 * 180.02562 * 20 19 15 44 44 H 1.08004 * 120.03300 * 180.27443 * 21 20 19 45 45 H 1.08997 * 113.61602 * 334.55366 * 22 5 3 46 46 H 1.09000 * 113.61522 * 105.46452 * 22 5 3 47 47 H 0.96700 * 114.00214 * 277.49547 * 25 23 22 48 48 H 1.09000 * 113.61479 * 254.61183 * 26 5 3 49 49 H 1.08998 * 113.61375 * 25.52239 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5664 1.2749 0.0006 6 7 4.1923 0.2071 -0.7832 7 6 4.0357 0.1730 -2.1213 8 8 3.3029 0.9710 -2.6667 9 6 4.7708 -0.8567 -2.9401 10 6 4.4192 -0.6788 -4.4185 11 6 5.1661 -1.7238 -5.2497 12 8 4.8382 -1.5572 -6.6305 13 6 5.4214 -2.4127 -7.5107 14 6 5.1482 -2.3076 -8.8666 15 6 5.7428 -3.1782 -9.7595 16 6 5.4469 -3.0642 -11.2328 17 8 4.0468 -3.2462 -11.4529 18 14 6.3960 -4.3722 -12.1599 19 6 6.6090 -4.1540 -9.3026 20 6 6.8830 -4.2610 -7.9514 21 6 6.2911 -3.3930 -7.0547 22 6 4.1754 1.4485 1.4019 23 6 5.1715 2.4297 0.7614 24 1 5.3799 3.3057 1.3757 25 8 6.3573 1.8020 0.2696 26 6 4.1098 2.6765 -0.3235 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3632 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8899 30 1 4.7195 -0.4753 -0.3390 31 1 4.4788 -1.8554 -2.6152 32 1 5.8448 -0.7300 -2.8038 33 1 4.7111 0.3199 -4.7436 34 1 3.3452 -0.8058 -4.5544 35 1 4.8746 -2.7226 -4.9246 36 1 6.2401 -1.5964 -5.1137 37 1 4.4711 -1.5459 -9.2240 38 1 5.7454 -2.0778 -11.5879 39 1 3.7834 -3.1852 -12.3814 40 1 5.9975 -5.7215 -11.6846 41 1 6.1375 -4.2501 -13.6172 42 1 7.0731 -4.8335 -10.0022 43 1 7.5603 -5.0239 -7.5969 44 1 6.5088 -3.4741 -5.9999 45 1 3.4993 1.9173 2.1169 46 1 4.6426 0.5435 1.7902 47 1 7.0288 1.6442 0.9473 48 1 4.5240 2.7627 -1.3280 49 1 3.4157 3.4809 -0.0801 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:54 Heat of formation + Delta-G solvation = -173.802445 kcal Electronic energy + Delta-G solvation = -32705.384983 eV Core-core repulsion = 27987.163385 eV Total energy + Delta-G solvation = -4718.221598 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.40437 -41.17435 -40.57524 -39.71821 -39.01568 -37.39565 -37.39300 -36.28256 -34.88522 -33.90673 -32.51395 -31.17370 -29.36984 -28.39518 -27.22564 -26.85773 -26.33779 -23.72394 -23.49531 -22.60049 -21.75964 -21.50318 -20.46483 -19.17026 -18.92403 -18.52280 -18.42747 -18.12660 -17.79585 -17.43096 -17.25842 -17.19004 -16.85473 -16.80655 -16.22109 -15.79300 -15.59713 -15.57851 -15.25395 -14.82723 -14.55059 -14.48070 -14.29954 -14.12913 -13.92147 -13.78925 -13.68842 -13.46476 -13.30471 -13.22571 -13.20986 -13.04801 -12.63202 -12.52242 -12.39898 -12.18354 -12.02712 -11.88301 -11.71804 -11.61510 -11.57918 -11.52222 -11.22710 -10.86437 -10.52325 -10.16953 -9.79986 -9.13329 -4.93774 0.30240 0.51632 1.10987 1.29180 1.49416 1.62139 1.79669 1.82847 1.97894 2.29983 2.72222 2.78549 3.08956 3.19911 3.35972 3.44096 3.55101 3.75468 3.79028 3.83616 3.88268 3.94841 4.07731 4.10717 4.19619 4.20611 4.23497 4.29744 4.30441 4.32992 4.34333 4.36506 4.42347 4.46536 4.60420 4.60766 4.63823 4.70486 4.71908 4.90239 5.00417 5.06693 5.19170 5.30097 5.36433 5.41854 5.45942 5.55881 5.77723 6.35184 6.45239 6.46234 6.50029 6.76301 7.15924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.354 6.354 3 C 0.471 3.529 4 O -0.496 6.496 5 C 0.163 3.837 6 N -0.694 5.694 7 C 0.521 3.479 8 O -0.527 6.527 9 C -0.134 4.134 10 C -0.105 4.105 11 C 0.060 3.940 12 O -0.312 6.312 13 C 0.132 3.868 14 C -0.125 4.125 15 C -0.035 4.035 16 C -0.079 4.079 17 O -0.535 6.535 18 Si 0.687 3.313 19 C -0.154 4.154 20 C -0.073 4.073 21 C -0.205 4.205 22 C -0.157 4.157 23 C 0.085 3.915 24 H 0.085 0.915 25 O -0.544 6.544 26 C -0.115 4.115 27 H 0.102 0.898 28 H 0.063 0.937 29 H 0.064 0.936 30 H 0.410 0.590 31 H 0.099 0.901 32 H 0.102 0.898 33 H 0.084 0.916 34 H 0.083 0.917 35 H 0.064 0.936 36 H 0.065 0.935 37 H 0.132 0.868 38 H 0.079 0.921 39 H 0.380 0.620 40 H -0.255 1.255 41 H -0.261 1.261 42 H 0.129 0.871 43 H 0.131 0.869 44 H 0.130 0.870 45 H 0.111 0.889 46 H 0.095 0.905 47 H 0.384 0.616 48 H 0.095 0.905 49 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.764 -3.014 4.979 8.923 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.269 6.269 3 C 0.312 3.688 4 O -0.382 6.382 5 C 0.073 3.927 6 N -0.349 5.349 7 C 0.308 3.692 8 O -0.403 6.403 9 C -0.174 4.174 10 C -0.143 4.143 11 C -0.015 4.015 12 O -0.225 6.225 13 C 0.087 3.913 14 C -0.144 4.144 15 C -0.035 4.035 16 C -0.188 4.188 17 O -0.342 6.342 18 Si 0.588 3.412 19 C -0.172 4.172 20 C -0.091 4.091 21 C -0.224 4.224 22 C -0.195 4.195 23 C 0.026 3.974 24 H 0.103 0.897 25 O -0.350 6.350 26 C -0.153 4.153 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.083 0.917 30 H 0.246 0.754 31 H 0.117 0.883 32 H 0.121 0.879 33 H 0.102 0.898 34 H 0.101 0.899 35 H 0.082 0.918 36 H 0.083 0.917 37 H 0.150 0.850 38 H 0.097 0.903 39 H 0.228 0.772 40 H -0.180 1.180 41 H -0.187 1.187 42 H 0.146 0.854 43 H 0.149 0.851 44 H 0.148 0.852 45 H 0.129 0.871 46 H 0.113 0.887 47 H 0.232 0.768 48 H 0.113 0.887 49 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 5.487 -2.707 4.098 7.364 hybrid contribution -0.798 -0.241 0.479 0.962 sum 4.689 -2.949 4.577 7.185 Atomic orbital electron populations 1.23315 0.76067 1.03890 1.02723 1.86504 1.23610 1.33206 1.83629 1.23731 0.91328 0.81707 0.72046 1.90678 1.66259 1.36446 1.44815 1.21071 0.84702 0.91446 0.95460 1.45420 1.53903 1.28944 1.06605 1.20632 0.81411 0.85307 0.81825 1.90783 1.37326 1.41066 1.71086 1.21489 1.01962 0.99151 0.94760 1.21230 1.02077 0.99782 0.91228 1.22813 0.99799 0.99782 0.79114 1.86079 1.66026 1.53434 1.16987 1.18988 0.92736 0.89793 0.89795 1.20239 1.02575 1.01962 0.89590 1.19023 0.96255 0.94928 0.93277 1.24858 0.87652 1.08630 0.97649 1.86601 1.21538 1.94807 1.31253 0.94995 0.89968 0.78364 0.77893 1.20845 1.01009 0.99259 0.96050 1.20875 0.98051 0.97782 0.92409 1.21305 1.01819 0.98560 1.00735 1.24000 0.99587 1.02395 0.93534 1.22628 0.84991 0.94372 0.95451 0.89709 1.86511 1.27230 1.82094 1.39123 1.23414 0.96136 0.94286 1.01512 0.87946 0.91778 0.91708 0.75414 0.88264 0.87943 0.89756 0.89871 0.91776 0.91662 0.84963 0.90338 0.77183 1.17951 1.18680 0.85398 0.85116 0.85202 0.87058 0.88658 0.76813 0.88671 0.86163 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.10 16 2 O -0.35 -1.09 10.42 -39.27 -0.41 -1.50 16 3 C 0.47 1.82 6.42 36.01 0.23 2.05 16 4 O -0.50 -3.23 15.66 -18.75 -0.29 -3.53 16 5 C 0.16 0.12 1.00 -132.16 -0.13 -0.01 16 6 N -0.69 0.42 4.53 -47.92 -0.22 0.20 16 7 C 0.52 0.79 7.31 -10.99 -0.08 0.70 16 8 O -0.53 -3.19 14.70 5.55 0.08 -3.11 16 9 C -0.13 0.26 5.70 -27.88 -0.16 0.10 16 10 C -0.11 -0.04 4.87 -26.73 -0.13 -0.17 16 11 C 0.06 -0.02 4.74 37.16 0.18 0.16 16 12 O -0.31 -1.01 10.14 -19.41 -0.20 -1.21 16 13 C 0.13 0.41 6.69 -39.22 -0.26 0.15 16 14 C -0.12 -0.44 9.55 -39.43 -0.38 -0.82 16 15 C -0.03 -0.08 5.42 -104.64 -0.57 -0.65 16 16 C -0.08 -0.07 2.81 36.01 0.10 0.03 16 17 O -0.53 -1.18 12.74 -35.23 -0.45 -1.63 16 18 Si 0.69 -0.28 29.79 -169.99 -5.06 -5.34 16 19 C -0.15 -0.18 8.67 -39.56 -0.34 -0.52 16 20 C -0.07 -0.04 10.04 -39.61 -0.40 -0.43 16 21 C -0.21 -0.23 9.04 -39.43 -0.36 -0.59 16 22 C -0.16 0.42 7.20 -25.92 -0.19 0.23 16 23 C 0.09 -0.19 5.28 -25.91 -0.14 -0.33 16 24 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 25 O -0.54 1.38 13.09 -35.23 -0.46 0.92 16 26 C -0.12 -0.12 6.67 -25.92 -0.17 -0.30 16 27 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.06 0.03 8.13 -51.93 -0.42 -0.39 16 29 H 0.06 0.14 8.13 -51.93 -0.42 -0.29 16 30 H 0.41 -1.48 8.67 -40.82 -0.35 -1.83 16 31 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 33 H 0.08 0.16 8.10 -51.93 -0.42 -0.26 16 34 H 0.08 0.18 8.10 -51.93 -0.42 -0.24 16 35 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 36 H 0.07 -0.12 7.66 -51.93 -0.40 -0.52 16 37 H 0.13 0.48 8.06 -52.48 -0.42 0.06 16 38 H 0.08 -0.06 7.96 -51.93 -0.41 -0.47 16 39 H 0.38 -0.75 8.74 45.56 0.40 -0.35 16 40 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 41 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 42 H 0.13 -0.11 4.87 -52.49 -0.26 -0.36 16 43 H 0.13 -0.27 8.06 -52.48 -0.42 -0.69 16 44 H 0.13 -0.16 6.30 -52.48 -0.33 -0.49 16 45 H 0.11 -0.33 8.10 -51.93 -0.42 -0.75 16 46 H 0.09 -0.43 8.09 -51.93 -0.42 -0.85 16 47 H 0.38 -2.57 9.12 45.56 0.42 -2.16 16 48 H 0.09 0.30 7.41 -51.93 -0.38 -0.09 16 49 H 0.12 0.17 7.35 -51.93 -0.38 -0.21 16 LS Contribution 410.33 15.07 6.18 6.18 Total: 0.00 -13.00 410.33 -8.91 -21.91 By element: Atomic # 1 Polarization: -7.26 SS G_CDS: -6.36 Total: -13.62 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -1.73 Total: 0.72 kcal Atomic # 7 Polarization: 0.42 SS G_CDS: -0.22 Total: 0.20 kcal Atomic # 8 Polarization: -8.32 SS G_CDS: -1.73 Total: -10.05 kcal Atomic # 14 Polarization: -0.28 SS G_CDS: -5.06 Total: -5.34 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -13.00 -8.91 -21.91 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.891 kcal (2) G-P(sol) polarization free energy of solvation -12.999 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.913 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.912 kcal (6) G-S(sol) free energy of system = (1) + (5) -173.802 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds