Wall clock time and date at job start Tue Mar 9 2021 13:00:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45208 * 1 3 3 C 1.34226 * 116.99878 * 2 1 4 4 O 1.20834 * 120.00211 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00203 * 180.02562 * 3 2 1 6 6 N 1.46501 * 112.84672 * 35.51566 * 5 3 2 7 7 C 1.34772 * 119.99877 * 66.99688 * 6 5 3 8 8 O 1.21277 * 120.00448 * 354.94909 * 7 6 5 9 9 C 1.50702 * 119.99782 * 174.95174 * 7 6 5 10 10 O 1.42906 * 109.47123 * 179.97438 * 9 7 6 11 11 C 1.35898 * 116.99972 * 179.97438 * 10 9 7 12 12 C 1.38708 * 120.05498 * 180.25197 * 11 10 9 13 13 C 1.38164 * 119.94794 * 180.25366 * 12 11 10 14 14 C 1.50694 * 119.97841 * 179.74684 * 13 12 11 15 15 O 1.42905 * 109.46880 * 64.72456 * 14 13 12 16 16 Si 1.86301 * 109.47288 * 184.72499 * 14 13 12 17 17 C 1.38245 * 120.04817 * 359.47328 * 13 12 11 18 18 C 1.38285 * 120.11909 * 0.27579 * 17 13 12 19 19 C 1.38132 * 120.05039 * 359.97438 * 18 17 13 20 20 C 1.53783 * 113.69373 * 264.25017 * 5 3 2 21 21 C 1.53783 * 87.08185 * 220.00686 * 20 5 3 22 22 H 1.08996 * 113.69088 * 139.98791 * 21 20 5 23 23 O 1.42903 * 113.60989 * 270.88195 * 21 20 5 24 24 C 1.53780 * 87.08310 * 25.42848 * 21 20 5 25 25 H 1.08995 * 109.46781 * 59.99337 * 1 2 3 26 26 H 1.08997 * 109.46567 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.46570 * 299.99928 * 1 2 3 28 28 H 0.97003 * 119.99898 * 246.98637 * 6 5 3 29 29 H 1.08997 * 109.47590 * 59.99833 * 9 7 6 30 30 H 1.08999 * 109.47315 * 299.99488 * 9 7 6 31 31 H 1.08011 * 120.03055 * 359.97438 * 12 11 10 32 32 H 1.09000 * 109.47115 * 304.72535 * 14 13 12 33 33 H 0.96696 * 114.00064 * 60.00052 * 15 14 13 34 34 H 1.48498 * 109.99963 * 58.68118 * 16 14 13 35 35 H 1.48507 * 109.99928 * 180.02562 * 16 14 13 36 36 H 1.08005 * 119.94303 * 180.25060 * 17 13 12 37 37 H 1.07993 * 119.97806 * 179.97438 * 18 17 13 38 38 H 1.07994 * 120.02626 * 179.97438 * 19 18 17 39 39 H 1.09005 * 113.61150 * 334.55283 * 20 5 3 40 40 H 1.09001 * 113.61896 * 105.45649 * 20 5 3 41 41 H 0.96698 * 113.99887 * 277.49022 * 23 21 20 42 42 H 1.08994 * 113.61726 * 220.02235 * 24 21 20 43 43 H 1.09001 * 113.61190 * 89.11546 * 24 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1916 0.2075 -0.7853 7 6 4.0339 0.1740 -2.1234 8 8 3.3009 0.9722 -2.6678 9 6 4.7685 -0.8553 -2.9431 10 8 4.4391 -0.6884 -4.3236 11 6 5.0220 -1.5433 -5.2047 12 6 4.7510 -1.4348 -6.5607 13 6 5.3408 -2.3084 -7.4540 14 6 5.0424 -2.1948 -8.9268 15 8 5.5367 -0.9471 -9.4180 16 14 5.8706 -3.5929 -9.8379 17 6 6.2088 -3.2831 -6.9984 18 6 6.4847 -3.3901 -5.6476 19 6 5.8936 -2.5224 -4.7500 20 6 4.1766 1.4479 1.4003 21 6 5.1721 2.4294 0.7595 22 1 5.3809 3.3051 1.3741 23 8 6.3575 1.8019 0.2665 24 6 4.1097 2.6767 -0.3244 25 1 -0.3633 0.5139 -0.8899 26 1 -0.3632 -1.0277 0.0005 27 1 -0.3632 0.5138 0.8900 28 1 4.7193 -0.4751 -0.3419 29 1 4.4767 -1.8541 -2.6185 30 1 5.8426 -0.7287 -2.8077 31 1 4.0760 -0.6708 -6.9177 32 1 3.9651 -2.2461 -9.0843 33 1 6.4908 -0.8322 -9.3104 34 1 5.3887 -4.8963 -9.3143 35 1 5.5845 -3.4918 -11.2916 36 1 6.6720 -3.9625 -7.6986 37 1 7.1628 -4.1527 -5.2941 38 1 6.1090 -2.6066 -3.6951 39 1 3.5010 1.9164 2.1161 40 1 4.6441 0.5427 1.7879 41 1 7.0296 1.6438 0.9436 42 1 4.5229 2.7634 -1.3292 43 1 3.4157 3.4810 -0.0802 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:21 Heat of formation + Delta-G solvation = -158.817591 kcal Electronic energy + Delta-G solvation = -29588.821531 eV Core-core repulsion = 25182.324963 eV Total energy + Delta-G solvation = -4406.496568 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.134 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -42.47820 -41.39909 -40.52867 -39.76334 -38.77448 -37.42368 -37.19242 -36.28189 -34.15524 -32.48063 -31.65372 -29.72887 -28.90907 -27.26440 -26.87854 -26.37619 -23.68081 -23.04024 -22.53666 -21.68236 -20.54819 -19.39303 -19.11871 -18.79958 -18.26679 -17.88751 -17.59067 -17.38495 -17.27615 -17.17000 -16.86899 -16.66094 -16.11410 -15.73918 -15.48490 -15.23279 -15.10919 -14.88146 -14.63911 -14.33820 -14.14159 -13.97582 -13.90756 -13.69034 -13.45162 -13.29510 -13.09548 -12.96091 -12.56582 -12.55896 -12.17501 -12.06518 -11.95340 -11.74116 -11.66447 -11.56218 -11.27690 -10.91683 -10.45823 -10.27109 -9.93447 -9.26746 -5.01705 0.19858 0.39931 1.02199 1.25913 1.33878 1.43560 1.65869 1.75401 1.98857 2.44611 2.66578 2.74893 3.03852 3.14664 3.35658 3.45409 3.50421 3.64603 3.70894 3.77244 3.88021 3.90488 4.00983 4.08607 4.18244 4.18871 4.28535 4.33223 4.35796 4.39057 4.53712 4.55877 4.61587 4.62405 4.65097 4.87667 4.96389 5.17660 5.23260 5.34421 5.38741 5.43256 5.64178 6.16191 6.34592 6.42543 6.60093 6.72206 7.01955 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.354 6.354 3 C 0.471 3.529 4 O -0.494 6.494 5 C 0.165 3.835 6 N -0.691 5.691 7 C 0.522 3.478 8 O -0.504 6.504 9 C 0.045 3.955 10 O -0.288 6.288 11 C 0.130 3.870 12 C -0.121 4.121 13 C -0.080 4.080 14 C -0.071 4.071 15 O -0.538 6.538 16 Si 0.692 3.308 17 C -0.153 4.153 18 C -0.073 4.073 19 C -0.206 4.206 20 C -0.156 4.156 21 C 0.085 3.915 22 H 0.087 0.913 23 O -0.545 6.545 24 C -0.117 4.117 25 H 0.065 0.935 26 H 0.102 0.898 27 H 0.064 0.936 28 H 0.411 0.589 29 H 0.095 0.905 30 H 0.099 0.901 31 H 0.135 0.865 32 H 0.115 0.885 33 H 0.379 0.621 34 H -0.257 1.257 35 H -0.255 1.255 36 H 0.129 0.871 37 H 0.132 0.868 38 H 0.130 0.870 39 H 0.113 0.887 40 H 0.096 0.904 41 H 0.384 0.616 42 H 0.096 0.904 43 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.823 -4.488 6.493 10.434 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.270 6.270 3 C 0.311 3.689 4 O -0.380 6.380 5 C 0.076 3.924 6 N -0.347 5.347 7 C 0.307 3.693 8 O -0.377 6.377 9 C -0.034 4.034 10 O -0.201 6.201 11 C 0.085 3.915 12 C -0.139 4.139 13 C -0.080 4.080 14 C -0.182 4.182 15 O -0.343 6.343 16 Si 0.594 3.406 17 C -0.171 4.171 18 C -0.091 4.091 19 C -0.224 4.224 20 C -0.194 4.194 21 C 0.026 3.974 22 H 0.104 0.896 23 O -0.350 6.350 24 C -0.155 4.155 25 H 0.083 0.917 26 H 0.121 0.879 27 H 0.083 0.917 28 H 0.247 0.753 29 H 0.113 0.887 30 H 0.117 0.883 31 H 0.153 0.847 32 H 0.132 0.868 33 H 0.227 0.773 34 H -0.182 1.182 35 H -0.180 1.180 36 H 0.147 0.853 37 H 0.150 0.850 38 H 0.148 0.852 39 H 0.131 0.869 40 H 0.115 0.885 41 H 0.233 0.767 42 H 0.114 0.886 43 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 4.833 -4.030 4.805 7.917 hybrid contribution -0.203 -0.356 1.336 1.398 sum 4.630 -4.387 6.142 8.854 Atomic orbital electron populations 1.23328 0.75947 1.03936 1.02775 1.86498 1.23715 1.33138 1.83608 1.23685 0.91263 0.81783 0.72181 1.90687 1.66185 1.36410 1.44688 1.21084 0.84741 0.91146 0.95418 1.45170 1.54248 1.29370 1.05894 1.20057 0.81914 0.85212 0.82074 1.90818 1.36038 1.39935 1.70882 1.22387 1.00663 0.99071 0.81235 1.86169 1.65623 1.53294 1.14984 1.19037 0.92958 0.89771 0.89769 1.20279 1.02989 1.01417 0.89248 1.20153 0.96646 0.95283 0.95947 1.25140 1.03916 0.96404 0.92697 1.86529 1.28361 1.36174 1.83223 0.94692 0.90798 0.76030 0.79069 1.20921 1.00375 0.99669 0.96107 1.20908 0.97939 0.97673 0.92544 1.21300 1.01729 0.98656 1.00762 1.24011 0.99579 1.02456 0.93344 1.22633 0.84981 0.94421 0.95394 0.89564 1.86510 1.27246 1.82096 1.39179 1.23442 0.96195 0.94178 1.01651 0.91663 0.87913 0.91713 0.75288 0.88676 0.88278 0.84677 0.86751 0.77327 1.18223 1.17964 0.85329 0.85046 0.85184 0.86872 0.88547 0.76746 0.88591 0.85965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.10 16 2 O -0.35 -1.05 10.41 -39.25 -0.41 -1.46 16 3 C 0.47 1.77 6.42 36.00 0.23 2.00 16 4 O -0.49 -3.16 15.66 -18.76 -0.29 -3.46 16 5 C 0.17 0.10 1.00 -132.16 -0.13 -0.03 16 6 N -0.69 0.44 4.53 -47.92 -0.22 0.22 16 7 C 0.52 1.23 7.39 -10.99 -0.08 1.15 16 8 O -0.50 -3.72 15.22 -14.35 -0.22 -3.93 16 9 C 0.05 -0.01 5.22 36.01 0.19 0.18 16 10 O -0.29 -1.04 9.67 -39.33 -0.38 -1.42 16 11 C 0.13 0.30 6.69 -39.22 -0.26 0.04 16 12 C -0.12 -0.33 9.62 -39.43 -0.38 -0.71 16 13 C -0.08 -0.08 5.35 -104.65 -0.56 -0.64 16 14 C -0.07 -0.04 2.80 36.00 0.10 0.06 16 15 O -0.54 -0.64 12.83 -35.23 -0.45 -1.09 16 16 Si 0.69 -0.54 29.80 -169.99 -5.07 -5.60 16 17 C -0.15 0.06 8.67 -39.56 -0.34 -0.28 16 18 C -0.07 0.06 10.04 -39.60 -0.40 -0.34 16 19 C -0.21 0.04 9.04 -39.43 -0.36 -0.32 16 20 C -0.16 0.48 7.20 -25.92 -0.19 0.29 16 21 C 0.09 -0.22 5.28 -25.92 -0.14 -0.35 16 22 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 23 O -0.54 1.53 13.09 -35.23 -0.46 1.07 16 24 C -0.12 -0.11 6.67 -25.92 -0.17 -0.29 16 25 H 0.06 0.14 8.13 -51.93 -0.42 -0.28 16 26 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 27 H 0.06 0.03 8.13 -51.93 -0.42 -0.40 16 28 H 0.41 -1.68 8.67 -40.82 -0.35 -2.04 16 29 H 0.10 -0.28 7.66 -51.93 -0.40 -0.68 16 30 H 0.10 -0.28 7.66 -51.93 -0.40 -0.68 16 31 H 0.14 0.48 8.06 -52.48 -0.42 0.06 16 32 H 0.12 0.13 7.96 -51.93 -0.41 -0.28 16 33 H 0.38 -1.08 8.70 45.56 0.40 -0.69 16 34 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 35 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 36 H 0.13 -0.32 4.90 -52.48 -0.26 -0.58 16 37 H 0.13 -0.43 8.06 -52.49 -0.42 -0.86 16 38 H 0.13 -0.37 6.30 -52.49 -0.33 -0.70 16 39 H 0.11 -0.38 8.10 -51.93 -0.42 -0.81 16 40 H 0.10 -0.49 8.09 -51.93 -0.42 -0.91 16 41 H 0.38 -2.70 9.12 45.56 0.42 -2.29 16 42 H 0.10 0.31 7.41 -51.93 -0.38 -0.07 16 43 H 0.12 0.15 7.35 -51.93 -0.38 -0.23 16 LS Contribution 367.95 15.07 5.54 5.54 Total: 0.00 -13.21 367.95 -8.05 -21.26 By element: Atomic # 1 Polarization: -8.30 SS G_CDS: -4.68 Total: -12.98 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: -1.42 Total: 1.86 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.22 Total: 0.22 kcal Atomic # 8 Polarization: -8.08 SS G_CDS: -2.21 Total: -10.29 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.07 Total: -5.60 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -13.21 -8.05 -21.26 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.558 kcal (2) G-P(sol) polarization free energy of solvation -13.207 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.765 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.053 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds