Wall clock time and date at job start Tue Mar 9 2021 13:00:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34230 * 117.00529 * 2 1 4 4 O 1.20822 * 119.99648 * 0.02562 * 3 2 1 5 5 C 1.50692 * 119.99884 * 179.97438 * 3 2 1 6 6 N 1.46503 * 112.85380 * 326.27493 * 5 3 2 7 7 C 1.34776 * 119.99782 * 56.02944 * 6 5 3 8 8 O 1.21699 * 119.99818 * 5.29900 * 7 6 5 9 9 C 1.46674 * 120.00029 * 185.29554 * 7 6 5 10 10 C 1.37888 * 126.22275 * 358.39913 * 9 7 6 11 11 C 1.39883 * 107.08774 * 180.02562 * 10 9 7 12 12 Br 1.89095 * 126.06859 * 180.02562 * 11 10 9 13 13 C 1.35503 * 107.85453 * 0.02562 * 11 10 9 14 14 C 1.50696 * 125.56738 * 180.02562 * 13 11 10 15 15 O 1.42902 * 109.46825 * 210.02318 * 14 13 11 16 16 Si 1.86302 * 109.47397 * 330.02083 * 14 13 11 17 17 N 1.35595 * 108.85838 * 0.26205 * 13 11 10 18 18 C 1.46501 * 125.67689 * 179.73356 * 17 13 11 19 19 C 1.53785 * 113.61309 * 195.08126 * 5 3 2 20 20 C 1.53784 * 87.07890 * 270.79968 * 19 5 3 21 21 H 1.09005 * 113.61266 * 89.11345 * 20 19 5 22 22 O 1.42900 * 113.61704 * 219.93380 * 20 19 5 23 23 C 1.53779 * 113.68921 * 97.54591 * 5 3 2 24 24 H 1.09003 * 109.46897 * 59.99711 * 1 2 3 25 25 H 1.08997 * 109.47653 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.46826 * 300.00415 * 1 2 3 27 27 H 0.96998 * 120.00158 * 236.03667 * 6 5 3 28 28 H 1.07996 * 126.45382 * 359.96571 * 10 9 7 29 29 H 1.08998 * 109.47429 * 90.02837 * 14 13 11 30 30 H 0.96697 * 114.00224 * 60.00212 * 15 14 13 31 31 H 1.48499 * 109.99780 * 180.02562 * 16 14 13 32 32 H 1.48500 * 109.99802 * 301.32529 * 16 14 13 33 33 H 1.08998 * 109.46816 * 86.24539 * 18 17 13 34 34 H 1.09000 * 109.47003 * 206.24580 * 18 17 13 35 35 H 1.08993 * 109.47250 * 326.24702 * 18 17 13 36 36 H 1.08996 * 113.61645 * 25.34750 * 19 5 3 37 37 H 1.08997 * 113.61402 * 156.17107 * 19 5 3 38 38 H 0.96699 * 113.99960 * 180.02562 * 22 20 19 39 39 H 1.08998 * 113.61435 * 203.67319 * 23 5 3 40 40 H 1.09002 * 113.61545 * 334.57454 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4035 2.2093 0.0005 5 6 3.5664 1.2746 0.0006 6 7 4.1929 0.1832 0.7506 7 6 3.9203 -1.0974 0.4310 8 8 3.2309 -1.3487 -0.5399 9 6 4.4544 -2.1882 1.2534 10 6 5.2702 -2.0525 2.3567 11 6 5.5381 -3.3410 2.8308 12 35 6.6067 -3.7764 4.3288 13 6 4.8957 -4.2217 2.0259 14 6 4.9135 -5.7210 2.1765 15 8 4.7731 -6.3305 0.8916 16 14 6.5281 -6.2493 2.9412 17 7 4.2386 -3.5337 1.0597 18 6 3.4298 -4.1241 -0.0097 19 6 4.1103 2.6656 0.3671 20 6 4.0423 3.0007 -1.1322 21 1 3.0838 3.4160 -1.4437 22 8 5.1561 3.7645 -1.5992 23 6 4.1743 1.4913 -1.3952 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3633 0.5139 0.8900 27 1 4.8039 0.3822 1.4772 28 1 5.6346 -1.1261 2.7754 29 1 4.0888 -6.0316 2.8180 30 1 5.4740 -6.0981 0.2673 31 1 6.5583 -7.7260 3.0945 32 1 7.6620 -5.8038 2.0920 33 1 2.4128 -4.2819 0.3490 34 1 3.4126 -3.4502 -0.8663 35 1 3.8625 -5.0791 -0.3074 36 1 3.4263 3.2549 0.9777 37 1 5.1245 2.6466 0.7660 38 1 5.1187 3.9787 -2.5415 39 1 5.2065 1.1514 -1.4795 40 1 3.5419 1.1326 -2.2074 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12808048_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:30 Heat of formation + Delta-G solvation = -104.918319 kcal Electronic energy + Delta-G solvation = -29322.115630 eV Core-core repulsion = 24959.620728 eV Total energy + Delta-G solvation = -4362.494901 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.040 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.98288 -42.44094 -40.38312 -39.55789 -38.04122 -37.55363 -36.50776 -34.77341 -34.14167 -32.25730 -31.16367 -29.26124 -27.57262 -27.26859 -27.13476 -25.86887 -23.74897 -22.82305 -21.54864 -20.86170 -20.59472 -19.48001 -18.89116 -18.37809 -18.19302 -17.81247 -17.62395 -17.14734 -16.84888 -16.48207 -16.06524 -15.81014 -15.57185 -15.33157 -15.16702 -14.81338 -14.63879 -14.53827 -14.41691 -14.06841 -13.82941 -13.71312 -13.69089 -13.36195 -13.17707 -13.08435 -12.80340 -12.63693 -12.43836 -12.08228 -12.02959 -11.88703 -11.70090 -11.62574 -11.21238 -10.96509 -10.80478 -10.40063 -9.86215 -9.34130 -4.68308 0.16182 0.36816 0.77098 0.91178 1.20937 1.43700 1.49640 1.55438 1.90917 2.16544 2.19698 2.89207 3.03771 3.16442 3.26252 3.29200 3.46674 3.54855 3.69413 3.79637 4.05718 4.13436 4.13869 4.20138 4.30062 4.35636 4.43123 4.50617 4.56641 4.57589 4.64676 4.67231 4.70562 4.74218 4.89159 5.12917 5.22702 5.26745 5.58828 5.79375 6.21088 6.30162 6.48885 6.77715 7.02048 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.334 6.334 3 C 0.472 3.528 4 O -0.521 6.521 5 C 0.159 3.841 6 N -0.691 5.691 7 C 0.592 3.408 8 O -0.532 6.532 9 C -0.052 4.052 10 C -0.094 4.094 11 C -0.190 4.190 12 Br 0.089 6.911 13 C 0.056 3.944 14 C -0.039 4.039 15 O -0.540 6.540 16 Si 0.627 3.373 17 N -0.387 5.387 18 C 0.055 3.945 19 C -0.102 4.102 20 C 0.084 3.916 21 H 0.088 0.912 22 O -0.564 6.564 23 C -0.149 4.149 24 H 0.062 0.938 25 H 0.118 0.882 26 H 0.064 0.936 27 H 0.425 0.575 28 H 0.188 0.812 29 H 0.140 0.860 30 H 0.387 0.613 31 H -0.270 1.270 32 H -0.278 1.278 33 H 0.078 0.922 34 H 0.097 0.903 35 H 0.115 0.885 36 H 0.095 0.905 37 H 0.136 0.864 38 H 0.399 0.601 39 H 0.119 0.881 40 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.681 1.663 1.913 3.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.249 6.249 3 C 0.315 3.685 4 O -0.410 6.410 5 C 0.070 3.930 6 N -0.347 5.347 7 C 0.380 3.620 8 O -0.409 6.409 9 C -0.166 4.166 10 C -0.121 4.121 11 C -0.275 4.275 12 Br 0.172 6.828 13 C -0.067 4.067 14 C -0.149 4.149 15 O -0.348 6.348 16 Si 0.529 3.471 17 N -0.059 5.059 18 C -0.085 4.085 19 C -0.140 4.140 20 C 0.024 3.976 21 H 0.106 0.894 22 O -0.372 6.372 23 C -0.188 4.188 24 H 0.081 0.919 25 H 0.136 0.864 26 H 0.083 0.917 27 H 0.265 0.735 28 H 0.205 0.795 29 H 0.157 0.843 30 H 0.237 0.763 31 H -0.196 1.196 32 H -0.204 1.204 33 H 0.097 0.903 34 H 0.116 0.884 35 H 0.133 0.867 36 H 0.114 0.886 37 H 0.154 0.846 38 H 0.250 0.750 39 H 0.137 0.863 40 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 1.457 0.706 2.238 2.762 hybrid contribution -0.712 0.009 -1.955 2.081 sum 0.745 0.715 0.282 1.071 Atomic orbital electron populations 1.23490 0.75716 1.05031 1.02462 1.86806 1.23958 1.31723 1.82378 1.23572 0.91453 0.81767 0.71752 1.90689 1.66854 1.37044 1.46432 1.21006 0.84913 0.89601 0.97461 1.45283 1.48473 1.02954 1.38010 1.16926 0.79435 0.82251 0.83420 1.90836 1.38255 1.83638 1.28157 1.20058 1.10014 0.84008 1.02522 1.21533 0.98443 0.97614 0.94461 1.20680 1.10371 0.95841 1.00648 1.96318 1.66911 1.83526 1.36005 1.20953 0.98398 0.95235 0.92068 1.24684 1.14522 0.85537 0.90159 1.86541 1.53029 1.72323 1.22874 0.92708 0.73886 0.82848 0.97708 1.43905 1.35383 1.04574 1.22023 1.22707 0.95410 1.01427 0.88967 1.23371 1.04296 0.89329 0.96984 1.23077 0.90342 0.89117 0.95017 0.89387 1.86457 1.44438 1.74323 1.31984 1.24074 1.03096 0.97705 0.93937 0.91933 0.86415 0.91743 0.73465 0.79516 0.84289 0.76300 1.19579 1.20373 0.90313 0.88437 0.86738 0.88611 0.84617 0.74989 0.86282 0.90900 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 113.37 1.20 1.25 16 2 O -0.33 -2.22 7.00 -43.79 -0.31 -2.52 16 3 C 0.47 2.69 7.03 71.23 0.50 3.19 16 4 O -0.52 -4.87 15.08 21.98 0.33 -4.54 16 5 C 0.16 -0.05 1.14 3.38 0.00 -0.05 16 6 N -0.69 2.08 5.27 -427.84 -2.26 -0.18 16 7 C 0.59 1.23 7.00 86.45 0.60 1.83 16 8 O -0.53 -3.99 11.73 18.70 0.22 -3.77 16 9 C -0.05 -0.04 6.89 40.35 0.28 0.24 16 10 C -0.09 0.28 10.34 22.59 0.23 0.52 16 11 C -0.19 0.19 6.16 22.04 0.14 0.33 16 12 Br 0.09 -0.29 28.24 -20.37 -0.58 -0.86 16 13 C 0.06 0.03 6.15 41.34 0.25 0.28 16 14 C -0.04 0.01 2.99 71.23 0.21 0.22 16 15 O -0.54 -0.19 10.07 -148.98 -1.50 -1.69 16 16 Si 0.63 1.17 27.10 68.60 1.86 3.03 16 17 N -0.39 -0.58 3.16 -519.62 -1.64 -2.22 16 18 C 0.05 0.01 10.27 127.77 1.31 1.32 16 19 C -0.10 0.34 6.95 31.12 0.22 0.56 16 20 C 0.08 -0.13 4.82 31.12 0.15 0.02 16 21 H 0.09 0.01 7.56 -2.38 -0.02 -0.01 16 22 O -0.56 1.00 13.67 -148.98 -2.04 -1.04 16 23 C -0.15 0.16 7.03 31.12 0.22 0.38 16 24 H 0.06 0.13 8.13 -2.39 -0.02 0.11 16 25 H 0.12 -0.22 8.14 -2.39 -0.02 -0.24 16 26 H 0.06 0.09 8.13 -2.39 -0.02 0.07 16 27 H 0.43 -3.99 7.55 -92.71 -0.70 -4.69 16 28 H 0.19 -1.86 7.44 -2.91 -0.02 -1.88 16 29 H 0.14 -0.30 7.96 -2.39 -0.02 -0.32 16 30 H 0.39 -1.61 8.32 -74.06 -0.62 -2.23 16 31 H -0.27 -2.20 7.11 99.48 0.71 -1.49 16 32 H -0.28 -1.89 7.11 99.48 0.71 -1.19 16 33 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 34 H 0.10 0.25 6.09 -2.39 -0.01 0.23 16 35 H 0.11 -0.25 5.15 -2.39 -0.01 -0.26 16 36 H 0.10 -0.20 7.68 -2.39 -0.02 -0.22 16 37 H 0.14 -1.02 8.14 -2.39 -0.02 -1.04 16 38 H 0.40 -3.62 9.12 -74.06 -0.68 -4.30 16 39 H 0.12 -0.28 8.14 -2.39 -0.02 -0.30 16 40 H 0.07 0.10 8.10 -2.39 -0.02 0.08 16 Total: 0.00 -19.96 346.65 -1.41 -21.37 By element: Atomic # 1 Polarization: -16.85 SS G_CDS: -0.82 Total: -17.67 kcal Atomic # 6 Polarization: 4.76 SS G_CDS: 5.32 Total: 10.08 kcal Atomic # 7 Polarization: 1.50 SS G_CDS: -3.90 Total: -2.40 kcal Atomic # 8 Polarization: -10.26 SS G_CDS: -3.29 Total: -13.55 kcal Atomic # 14 Polarization: 1.17 SS G_CDS: 1.86 Total: 3.03 kcal Atomic # 35 Polarization: -0.29 SS G_CDS: -0.58 Total: -0.86 kcal Total: -19.96 -1.41 -21.37 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.547 kcal (2) G-P(sol) polarization free energy of solvation -19.961 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.508 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.371 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.918 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds