Wall clock time and date at job start Tue Mar 9 2021 13:00:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34223 * 117.00037 * 2 1 4 4 O 1.20827 * 120.00103 * 0.02562 * 3 2 1 5 5 C 1.50702 * 120.00102 * 179.97438 * 3 2 1 6 6 N 1.46497 * 112.84892 * 324.14742 * 5 3 2 7 7 C 1.34775 * 120.00060 * 284.43983 * 6 5 3 8 8 O 1.21291 * 119.99723 * 5.04559 * 7 6 5 9 9 C 1.50702 * 120.00264 * 185.04554 * 7 6 5 10 10 O 1.42899 * 109.47125 * 180.02562 * 9 7 6 11 11 C 1.35912 * 117.00333 * 180.02562 * 10 9 7 12 12 C 1.38787 * 120.06309 * 179.71778 * 11 10 9 13 13 Br 1.89097 * 120.03543 * 0.02562 * 12 11 10 14 14 C 1.38240 * 119.92681 * 179.76569 * 12 11 10 15 15 C 1.38241 * 120.04451 * 0.48468 * 14 12 11 16 16 C 1.50708 * 119.94136 * 179.76840 * 15 14 12 17 17 O 1.42899 * 109.47190 * 245.02756 * 16 15 14 18 18 Si 1.86301 * 109.46811 * 5.02232 * 16 15 14 19 19 C 1.38280 * 120.12328 * 359.79447 * 15 14 12 20 20 C 1.38149 * 120.06730 * 359.95173 * 19 15 14 21 21 C 1.53784 * 113.61486 * 192.94605 * 5 3 2 22 22 C 1.53778 * 87.07994 * 270.80097 * 21 5 3 23 23 H 1.08998 * 113.61406 * 89.11998 * 22 21 5 24 24 O 1.42904 * 113.61193 * 220.01642 * 22 21 5 25 25 C 1.53778 * 87.08306 * 334.56861 * 22 21 5 26 26 H 1.09002 * 109.46874 * 179.97438 * 1 2 3 27 27 H 1.09003 * 109.47001 * 299.99955 * 1 2 3 28 28 H 1.09002 * 109.46835 * 59.99841 * 1 2 3 29 29 H 0.96998 * 119.99993 * 104.44683 * 6 5 3 30 30 H 1.09001 * 109.46543 * 300.00034 * 9 7 6 31 31 H 1.08993 * 109.47196 * 60.00378 * 9 7 6 32 32 H 1.08001 * 119.97561 * 180.23389 * 14 12 11 33 33 H 1.08994 * 109.47450 * 125.02493 * 16 15 14 34 34 H 0.96708 * 114.00252 * 59.99745 * 17 16 15 35 35 H 1.48503 * 109.99914 * 58.68427 * 18 16 15 36 36 H 1.48501 * 110.00046 * 180.02562 * 18 16 15 37 37 H 1.07993 * 119.96961 * 179.97438 * 19 15 14 38 38 H 1.07992 * 120.02140 * 180.02562 * 20 19 15 39 39 H 1.08996 * 113.61323 * 25.35430 * 21 5 3 40 40 H 1.08999 * 113.60927 * 156.16615 * 21 5 3 41 41 H 0.96697 * 114.00026 * 180.02562 * 24 22 21 42 42 H 1.09000 * 113.61432 * 270.87808 * 25 22 21 43 43 H 1.09003 * 113.61030 * 139.98819 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1914 0.2120 0.7918 7 6 4.1808 0.2790 2.1378 8 8 3.5756 1.1697 2.6959 9 6 4.9208 -0.7529 2.9494 10 8 4.7600 -0.4695 4.3408 11 6 5.3699 -1.3111 5.2165 12 6 5.2604 -1.0919 6.5825 13 35 4.2615 0.3782 7.2281 14 6 5.8778 -1.9525 7.4709 15 6 6.6120 -3.0246 6.9990 16 6 7.2885 -3.9584 7.9694 17 8 8.7057 -3.8617 7.8142 18 14 6.8211 -3.4894 9.7108 19 6 6.7272 -3.2416 5.6382 20 6 6.1078 -2.3876 4.7462 21 6 4.1095 2.6785 0.3162 22 6 4.0443 2.9576 -1.1946 23 1 3.0865 3.3610 -1.5232 24 8 5.1600 3.7020 -1.6878 25 6 4.1769 1.4395 -1.4011 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 4.6129 -0.5398 0.3468 30 1 4.5193 -1.7426 2.7318 31 1 5.9798 -0.7259 2.6929 32 1 5.7900 -1.7848 8.5342 33 1 6.9702 -4.9817 7.7709 34 1 9.0597 -2.9764 7.9761 35 1 5.3468 -3.5552 9.8762 36 1 7.4824 -4.4023 10.6775 37 1 7.3017 -4.0797 5.2723 38 1 6.1980 -2.5580 3.6837 39 1 3.4243 3.2900 0.9032 40 1 5.1229 2.6744 0.7175 41 1 5.1245 3.8811 -2.6374 42 1 5.2093 1.0969 -1.4708 43 1 3.5462 1.0510 -2.2007 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12808048_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:35 Heat of formation + Delta-G solvation = -160.107332 kcal Electronic energy + Delta-G solvation = -31466.869807 eV Core-core repulsion = 26720.499309 eV Total energy + Delta-G solvation = -4746.370498 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 416.044 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.65129 -41.61149 -40.66841 -39.78921 -38.99456 -37.65911 -37.21391 -36.52229 -34.29394 -33.48423 -32.12860 -30.56353 -29.80152 -29.08295 -27.19793 -26.56174 -26.02093 -24.10050 -23.22356 -22.44286 -21.76069 -20.78384 -19.71874 -19.30699 -18.66890 -18.34568 -18.15343 -17.89265 -17.54380 -17.45306 -17.15037 -16.81901 -16.49038 -15.98311 -15.74604 -15.64815 -15.54974 -15.37444 -14.77873 -14.71239 -14.46642 -14.30598 -14.08989 -13.97355 -13.83343 -13.67364 -13.44444 -13.41222 -13.20740 -12.61039 -12.41113 -12.28346 -12.19038 -12.03462 -11.98072 -11.89620 -11.86084 -11.81138 -11.20793 -11.11434 -11.02045 -10.50176 -10.45054 -9.99384 -9.32074 -5.03083 -0.03077 0.08664 0.63721 0.75222 1.19642 1.28315 1.29145 1.54394 1.59685 1.93256 2.34823 2.40303 2.92439 3.09631 3.28496 3.39038 3.43689 3.49591 3.57647 3.65363 3.79584 3.83230 4.02096 4.03750 4.06369 4.09337 4.15160 4.18377 4.34582 4.45837 4.47486 4.55290 4.57949 4.64031 4.66132 4.74809 4.79184 4.83168 5.03801 5.06876 5.19022 5.30874 5.46193 6.02360 6.29068 6.44261 6.77863 6.81396 6.98595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.351 6.351 3 C 0.471 3.529 4 O -0.524 6.524 5 C 0.156 3.844 6 N -0.687 5.687 7 C 0.513 3.487 8 O -0.555 6.555 9 C 0.037 3.963 10 O -0.305 6.305 11 C 0.150 3.850 12 C -0.141 4.141 13 Br -0.051 7.051 14 C -0.054 4.054 15 C -0.152 4.152 16 C -0.052 4.052 17 O -0.550 6.550 18 Si 0.741 3.259 19 C -0.033 4.033 20 C -0.193 4.193 21 C -0.112 4.112 22 C 0.082 3.918 23 H 0.087 0.913 24 O -0.566 6.566 25 C -0.129 4.129 26 H 0.134 0.866 27 H 0.050 0.950 28 H 0.070 0.930 29 H 0.433 0.567 30 H 0.133 0.867 31 H 0.138 0.862 32 H 0.147 0.853 33 H 0.119 0.881 34 H 0.396 0.604 35 H -0.290 1.290 36 H -0.293 1.293 37 H 0.157 0.843 38 H 0.176 0.824 39 H 0.061 0.939 40 H 0.108 0.892 41 H 0.402 0.598 42 H 0.144 0.856 43 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.931 -6.184 -7.537 10.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.266 6.266 3 C 0.313 3.687 4 O -0.412 6.412 5 C 0.067 3.933 6 N -0.345 5.345 7 C 0.300 3.700 8 O -0.431 6.431 9 C -0.040 4.040 10 O -0.218 6.218 11 C 0.102 3.898 12 C -0.221 4.221 13 Br 0.034 6.966 14 C -0.073 4.073 15 C -0.153 4.153 16 C -0.163 4.163 17 O -0.358 6.358 18 Si 0.648 3.352 19 C -0.052 4.052 20 C -0.212 4.212 21 C -0.150 4.150 22 C 0.022 3.978 23 H 0.105 0.895 24 O -0.374 6.374 25 C -0.166 4.166 26 H 0.152 0.848 27 H 0.068 0.932 28 H 0.088 0.912 29 H 0.273 0.727 30 H 0.150 0.850 31 H 0.156 0.844 32 H 0.164 0.836 33 H 0.136 0.864 34 H 0.246 0.754 35 H -0.217 1.217 36 H -0.220 1.220 37 H 0.174 0.826 38 H 0.193 0.807 39 H 0.080 0.920 40 H 0.127 0.873 41 H 0.253 0.747 42 H 0.162 0.838 43 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 3.500 -5.425 -5.631 8.567 hybrid contribution -0.735 -0.606 -0.936 1.336 sum 2.765 -6.031 -6.567 9.335 Atomic orbital electron populations 1.23578 0.74740 1.05903 1.02373 1.86472 1.24834 1.32125 1.83205 1.23785 0.91774 0.81669 0.71482 1.90691 1.67096 1.37502 1.45919 1.20996 0.84438 0.90523 0.97371 1.45369 1.58548 1.26035 1.04530 1.20718 0.80414 0.85980 0.82885 1.90839 1.43477 1.37195 1.71558 1.22799 1.03640 0.98942 0.78648 1.86235 1.69316 1.50041 1.16171 1.18788 0.92586 0.90211 0.88191 1.21147 1.08258 0.99791 0.92898 1.96782 1.71687 1.40895 1.87239 1.20905 0.94795 0.92620 0.98994 1.20301 1.01500 0.97393 0.96127 1.24810 0.84068 1.01016 1.06426 1.86479 1.18270 1.37536 1.93511 0.94013 0.78202 0.88386 0.74561 1.21228 0.94544 0.97924 0.91454 1.21625 1.01416 0.95314 1.02880 1.23263 1.02392 0.92320 0.97060 1.23104 0.90327 0.90692 0.93684 0.89474 1.86494 1.44120 1.75918 1.30899 1.24024 1.04616 0.96755 0.91219 0.84753 0.93155 0.91162 0.72669 0.84958 0.84444 0.83589 0.86372 0.75404 1.21678 1.22049 0.82586 0.80722 0.92001 0.87335 0.74735 0.83830 0.87612 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 113.37 1.20 1.19 16 2 O -0.35 -1.12 10.42 -51.35 -0.54 -1.66 16 3 C 0.47 2.95 6.77 71.24 0.48 3.44 16 4 O -0.52 -6.81 15.11 21.96 0.33 -6.48 16 5 C 0.16 -0.02 1.12 3.38 0.00 -0.02 16 6 N -0.69 3.56 5.09 -423.91 -2.16 1.40 16 7 C 0.51 0.68 7.57 87.66 0.66 1.34 16 8 O -0.55 -7.58 15.52 15.97 0.25 -7.34 16 9 C 0.04 -0.22 5.22 71.24 0.37 0.15 16 10 O -0.31 -1.16 9.00 -73.52 -0.66 -1.83 16 11 C 0.15 0.21 6.68 22.52 0.15 0.36 16 12 C -0.14 -0.58 6.24 22.40 0.14 -0.44 16 13 Br -0.05 -0.42 33.16 -20.37 -0.68 -1.09 16 14 C -0.05 -0.01 8.40 22.27 0.19 0.17 16 15 C -0.15 0.39 5.35 -19.85 -0.11 0.28 16 16 C -0.05 0.17 2.80 71.24 0.20 0.37 16 17 O -0.55 1.73 12.83 -148.98 -1.91 -0.18 16 18 Si 0.74 -1.33 29.80 68.60 2.04 0.72 16 19 C -0.03 0.17 9.68 22.26 0.22 0.38 16 20 C -0.19 1.06 9.04 22.37 0.20 1.26 16 21 C -0.11 -0.49 5.80 31.12 0.18 -0.31 16 22 C 0.08 -0.06 4.82 31.12 0.15 0.09 16 23 H 0.09 0.08 7.62 -2.39 -0.02 0.06 16 24 O -0.57 0.66 13.67 -148.98 -2.04 -1.38 16 25 C -0.13 0.92 7.25 31.12 0.23 1.15 16 26 H 0.13 -0.87 8.14 -2.39 -0.02 -0.89 16 27 H 0.05 0.17 8.13 -2.39 -0.02 0.15 16 28 H 0.07 -0.06 8.13 -2.39 -0.02 -0.08 16 29 H 0.43 -6.26 8.76 -92.71 -0.81 -7.07 16 30 H 0.13 -1.68 7.66 -2.39 -0.02 -1.70 16 31 H 0.14 -1.84 7.66 -2.39 -0.02 -1.86 16 32 H 0.15 -0.27 4.90 -2.91 -0.01 -0.29 16 33 H 0.12 -0.41 7.96 -2.39 -0.02 -0.42 16 34 H 0.40 -4.12 8.70 -74.05 -0.64 -4.76 16 35 H -0.29 -1.20 7.11 99.48 0.71 -0.50 16 36 H -0.29 -1.56 7.11 99.48 0.71 -0.85 16 37 H 0.16 -1.34 8.06 -2.91 -0.02 -1.36 16 38 H 0.18 -2.33 6.30 -2.91 -0.02 -2.35 16 39 H 0.06 0.72 7.64 -2.39 -0.02 0.70 16 40 H 0.11 0.42 8.14 -2.39 -0.02 0.40 16 41 H 0.40 -4.08 9.12 -74.06 -0.68 -4.76 16 42 H 0.14 -1.72 8.14 -2.39 -0.02 -1.74 16 43 H 0.11 -1.05 8.10 -2.39 -0.02 -1.07 16 Total: 0.00 -34.72 389.29 -2.07 -36.80 By element: Atomic # 1 Polarization: -27.42 SS G_CDS: -0.98 Total: -28.40 kcal Atomic # 6 Polarization: 5.17 SS G_CDS: 4.26 Total: 9.43 kcal Atomic # 7 Polarization: 3.56 SS G_CDS: -2.16 Total: 1.40 kcal Atomic # 8 Polarization: -14.29 SS G_CDS: -4.57 Total: -18.85 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: 2.04 Total: 0.72 kcal Atomic # 35 Polarization: -0.42 SS G_CDS: -0.68 Total: -1.09 kcal Total: -34.72 -2.07 -36.80 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.308 kcal (2) G-P(sol) polarization free energy of solvation -34.724 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.032 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.075 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds