Wall clock time and date at job start Tue Mar 9 2021 13:00:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45208 * 1 3 3 C 1.34230 * 116.99839 * 2 1 4 4 O 1.20830 * 119.99810 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00175 * 180.02562 * 3 2 1 6 6 N 1.46508 * 112.84627 * 324.05749 * 5 3 2 7 7 C 1.34776 * 119.99657 * 293.64395 * 6 5 3 8 8 O 1.21280 * 120.00663 * 354.98442 * 7 6 5 9 9 C 1.50699 * 119.99629 * 174.99095 * 7 6 5 10 10 N 1.46908 * 109.47145 * 179.97438 * 9 7 6 11 11 C 1.46900 * 110.99485 * 293.95069 * 10 9 7 12 12 C 1.39672 * 110.99929 * 169.99384 * 10 9 7 13 13 C 1.38890 * 120.07825 * 239.99825 * 12 10 9 14 14 C 1.50697 * 120.03579 * 359.95657 * 13 12 10 15 15 O 1.42904 * 109.46969 * 75.00102 * 14 13 12 16 16 Si 1.86299 * 109.47247 * 195.00012 * 14 13 12 17 17 C 1.38128 * 119.92543 * 179.97438 * 13 12 10 18 18 C 1.38266 * 120.07554 * 359.97438 * 17 13 12 19 19 C 1.50697 * 119.92276 * 180.02562 * 18 17 13 20 20 F 1.39898 * 109.47015 * 90.00512 * 19 18 17 21 21 F 1.39894 * 109.47104 * 210.00246 * 19 18 17 22 22 F 1.39901 * 109.47363 * 330.00385 * 19 18 17 23 23 C 1.38306 * 120.15018 * 0.03050 * 18 17 13 24 24 C 1.38087 * 120.07642 * 359.73464 * 23 18 17 25 25 C 1.53780 * 113.61635 * 192.86425 * 5 3 2 26 26 C 1.53778 * 87.07996 * 270.79597 * 25 5 3 27 27 H 1.09000 * 113.61522 * 89.19700 * 26 25 5 28 28 O 1.42899 * 113.61691 * 220.01793 * 26 25 5 29 29 C 1.53773 * 113.69513 * 95.32478 * 5 3 2 30 30 H 1.08994 * 109.46767 * 299.99679 * 1 2 3 31 31 H 1.08994 * 109.47121 * 60.00408 * 1 2 3 32 32 H 1.09001 * 109.46572 * 179.97438 * 1 2 3 33 33 H 0.97000 * 120.00004 * 113.64151 * 6 5 3 34 34 H 1.08992 * 109.47592 * 59.99323 * 9 7 6 35 35 H 1.09004 * 109.46841 * 299.99502 * 9 7 6 36 36 H 1.08992 * 109.47077 * 60.00173 * 11 10 9 37 37 H 1.09008 * 109.46402 * 180.02562 * 11 10 9 38 38 H 1.08998 * 109.47013 * 299.99434 * 11 10 9 39 39 H 1.09001 * 109.46879 * 315.00356 * 14 13 12 40 40 H 0.96700 * 113.99934 * 299.99818 * 15 14 13 41 41 H 1.48496 * 109.99994 * 60.00325 * 16 14 13 42 42 H 1.48499 * 109.99808 * 181.31912 * 16 14 13 43 43 H 1.07998 * 119.96044 * 180.02562 * 17 13 12 44 44 H 1.08000 * 119.96372 * 180.02562 * 23 18 17 45 45 H 1.07996 * 120.04343 * 180.27683 * 24 23 18 46 46 H 1.09003 * 113.61339 * 25.34690 * 25 5 3 47 47 H 1.08997 * 113.61725 * 156.24907 * 25 5 3 48 48 H 0.96701 * 114.00321 * 179.97438 * 28 26 25 49 49 H 1.09000 * 113.61643 * 203.68173 * 29 5 3 50 50 H 1.09007 * 113.61354 * 334.57826 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 7 4.1920 0.2130 0.7914 7 6 4.0241 0.1816 2.1283 8 8 3.4324 1.0811 2.6866 9 6 4.5719 -0.9712 2.9296 10 7 4.2606 -0.7711 4.3513 11 6 4.9732 0.3966 4.8868 12 6 4.5505 -1.9183 5.0934 13 6 3.5439 -2.5623 5.8012 14 6 2.1368 -2.0236 5.7703 15 8 1.5362 -2.3321 4.5109 16 14 1.1432 -2.8034 7.1397 17 6 3.8340 -3.6969 6.5336 18 6 5.1247 -4.1919 6.5623 19 6 5.4373 -5.4303 7.3621 20 9 5.2710 -6.5609 6.5551 21 9 6.7595 -5.3713 7.8153 22 9 4.5716 -5.5084 8.4583 23 6 6.1296 -3.5530 5.8588 24 6 5.8455 -2.4211 5.1206 25 6 4.1097 2.6789 0.3132 26 6 4.0436 2.9564 -1.1979 27 1 3.0860 3.3607 -1.5261 28 8 5.1588 3.7003 -1.6927 29 6 4.1760 1.4381 -1.4028 30 1 -0.3632 0.5138 0.8900 31 1 -0.3633 0.5137 -0.8900 32 1 -0.3632 -1.0277 -0.0005 33 1 4.7269 -0.4674 0.3537 34 1 5.6526 -1.0238 2.7985 35 1 4.1185 -1.9008 2.5854 36 1 4.6758 1.2882 4.3351 37 1 4.7252 0.5214 5.9409 38 1 6.0477 0.2459 4.7822 39 1 2.1586 -0.9425 5.9074 40 1 2.0019 -1.9574 3.7507 41 1 1.7574 -2.4900 8.4549 42 1 -0.2549 -2.3043 7.1004 43 1 3.0516 -4.1984 7.0838 44 1 7.1366 -3.9425 5.8830 45 1 6.6297 -1.9252 4.5678 46 1 3.4248 3.2911 0.9000 47 1 5.1239 2.6755 0.7125 48 1 5.1231 3.8777 -2.6426 49 1 5.2084 1.0954 -1.4727 50 1 3.5447 1.0485 -2.2015 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:39 Heat of formation + Delta-G solvation = -258.834080 kcal Electronic energy + Delta-G solvation = -42780.566498 eV Core-core repulsion = 36748.014387 eV Total energy + Delta-G solvation = -6032.552111 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 419.148 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -51.14109 -48.65958 -48.59327 -42.60428 -41.79878 -40.57501 -39.76286 -37.80734 -37.55371 -37.47860 -36.50056 -34.25166 -33.07179 -32.23144 -29.89785 -29.07697 -27.73679 -27.26045 -26.98422 -26.26926 -25.06891 -23.63872 -23.10844 -22.15126 -21.58638 -20.73330 -19.55731 -19.46214 -19.44656 -19.39982 -18.69686 -18.29951 -18.14839 -17.96604 -17.66614 -17.36412 -17.07160 -16.86957 -16.48522 -16.34294 -16.06520 -15.65067 -15.55178 -15.51341 -15.39805 -15.09953 -15.06244 -14.97420 -14.77862 -14.74502 -14.64989 -14.63770 -14.36048 -14.23045 -14.14829 -13.96542 -13.77045 -13.66253 -13.43972 -13.28794 -13.17463 -13.04742 -13.01750 -12.69381 -12.56903 -12.03171 -11.94085 -11.84018 -11.77037 -11.42123 -11.19016 -11.12551 -10.99336 -10.44648 -10.35342 -10.17688 -9.86858 -4.89207 -0.47032 -0.09976 0.91374 1.27068 1.38271 1.51462 1.60060 1.63795 1.66071 2.03112 2.06951 2.44101 2.67733 2.87086 2.93932 3.00397 3.23403 3.35725 3.38704 3.40947 3.41738 3.53890 3.62701 3.76633 3.79239 3.84605 3.93107 3.98372 4.03828 4.07484 4.12797 4.22719 4.26409 4.27392 4.33109 4.38805 4.39173 4.51203 4.55549 4.57472 4.73109 4.80022 4.85694 4.86778 4.91668 5.01474 5.09307 5.24650 5.28473 5.35464 5.90217 6.14384 6.49427 6.57933 6.59941 6.95392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.350 6.350 3 C 0.478 3.522 4 O -0.489 6.489 5 C 0.159 3.841 6 N -0.710 5.710 7 C 0.518 3.482 8 O -0.503 6.503 9 C 0.037 3.963 10 N -0.493 5.493 11 C 0.020 3.980 12 C 0.127 3.873 13 C -0.087 4.087 14 C -0.064 4.064 15 O -0.530 6.530 16 Si 0.728 3.272 17 C -0.054 4.054 18 C -0.176 4.176 19 C 0.509 3.491 20 F -0.173 7.173 21 F -0.175 7.175 22 F -0.174 7.174 23 C -0.055 4.055 24 C -0.146 4.146 25 C -0.103 4.103 26 C 0.080 3.920 27 H 0.096 0.904 28 O -0.552 6.552 29 C -0.156 4.156 30 H 0.066 0.934 31 H 0.064 0.936 32 H 0.106 0.894 33 H 0.409 0.591 34 H 0.077 0.923 35 H 0.114 0.886 36 H 0.098 0.902 37 H 0.074 0.926 38 H 0.033 0.967 39 H 0.085 0.915 40 H 0.365 0.635 41 H -0.248 1.248 42 H -0.251 1.251 43 H 0.146 0.854 44 H 0.141 0.859 45 H 0.136 0.864 46 H 0.097 0.903 47 H 0.107 0.893 48 H 0.384 0.616 49 H 0.117 0.883 50 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.539 -2.597 -5.636 7.144 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.266 6.266 3 C 0.318 3.682 4 O -0.374 6.374 5 C 0.070 3.930 6 N -0.366 5.366 7 C 0.303 3.697 8 O -0.376 6.376 9 C -0.093 4.093 10 N -0.215 5.215 11 C -0.126 4.126 12 C 0.033 3.967 13 C -0.089 4.089 14 C -0.173 4.173 15 O -0.335 6.335 16 Si 0.626 3.374 17 C -0.072 4.072 18 C -0.178 4.178 19 C 0.454 3.546 20 F -0.154 7.154 21 F -0.157 7.157 22 F -0.155 7.155 23 C -0.074 4.074 24 C -0.166 4.166 25 C -0.141 4.141 26 C 0.020 3.980 27 H 0.114 0.886 28 O -0.357 6.357 29 C -0.194 4.194 30 H 0.085 0.915 31 H 0.083 0.917 32 H 0.124 0.876 33 H 0.246 0.754 34 H 0.094 0.906 35 H 0.132 0.868 36 H 0.117 0.883 37 H 0.092 0.908 38 H 0.052 0.948 39 H 0.103 0.897 40 H 0.212 0.788 41 H -0.172 1.172 42 H -0.175 1.175 43 H 0.163 0.837 44 H 0.159 0.841 45 H 0.154 0.846 46 H 0.115 0.885 47 H 0.126 0.874 48 H 0.232 0.768 49 H 0.135 0.865 50 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 1.613 -1.754 -3.430 4.177 hybrid contribution 1.641 0.590 -1.488 2.292 sum 3.254 -1.165 -4.918 6.011 Atomic orbital electron populations 1.23367 0.75463 1.04220 1.02838 1.86482 1.23963 1.32594 1.83548 1.23090 0.90541 0.81961 0.72590 1.90710 1.66044 1.36388 1.44233 1.20977 0.85948 0.90773 0.95279 1.45735 1.53735 1.30437 1.06695 1.20476 0.79847 0.87478 0.81894 1.90765 1.39978 1.37213 1.69679 1.22101 1.00984 0.98259 0.87946 1.59257 1.59234 1.02504 1.00468 1.22690 0.95235 0.92850 1.01808 1.18817 0.91632 0.91281 0.94974 1.20254 0.96649 0.94740 0.97214 1.25322 0.93341 1.03318 0.95363 1.86725 1.54291 1.78031 1.14484 0.93336 0.78886 0.91284 0.73868 1.20742 0.95080 0.94601 0.96823 1.19986 0.96345 0.97303 1.04136 1.18223 0.74440 0.83838 0.78050 1.93255 1.95137 1.54007 1.72986 1.93209 1.36198 1.96539 1.89728 1.93219 1.69826 1.96657 1.55799 1.20868 0.98904 0.94180 0.93462 1.21672 0.96978 0.97196 1.00767 1.23298 1.03180 0.91791 0.95859 1.23234 0.90608 0.88887 0.95249 0.88589 1.86533 1.44408 1.75757 1.29034 1.24063 1.03119 0.99080 0.93118 0.91538 0.91699 0.87608 0.75439 0.90551 0.86807 0.88327 0.90752 0.94836 0.89720 0.78759 1.17226 1.17498 0.83730 0.84112 0.84649 0.88491 0.87435 0.76836 0.86512 0.89432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.35 -0.43 10.42 -39.26 -0.41 -0.84 16 3 C 0.48 1.03 6.45 36.00 0.23 1.26 16 4 O -0.49 -2.40 15.12 -18.75 -0.28 -2.68 16 5 C 0.16 -0.11 1.11 -132.16 -0.15 -0.26 16 6 N -0.71 1.94 5.13 -47.93 -0.25 1.69 16 7 C 0.52 -0.46 7.20 -10.99 -0.08 -0.54 16 8 O -0.50 -1.59 13.35 5.56 0.07 -1.51 16 9 C 0.04 -0.12 4.91 -4.97 -0.02 -0.14 16 10 N -0.49 0.57 3.19 -180.32 -0.57 -0.01 16 11 C 0.02 -0.02 8.94 60.06 0.54 0.52 16 12 C 0.13 -0.13 4.61 -83.78 -0.39 -0.52 16 13 C -0.09 0.00 5.28 -104.42 -0.55 -0.55 16 14 C -0.06 -0.06 2.30 36.00 0.08 0.02 16 15 O -0.53 -0.85 12.65 -35.23 -0.45 -1.30 16 16 Si 0.73 0.38 30.17 -169.99 -5.13 -4.75 16 17 C -0.05 0.01 8.01 -39.61 -0.32 -0.30 16 18 C -0.18 0.05 5.46 -104.59 -0.57 -0.52 16 19 C 0.51 0.30 3.36 36.00 0.12 0.42 16 20 F -0.17 -0.21 17.30 2.25 0.04 -0.17 16 21 F -0.18 -0.19 16.46 2.25 0.04 -0.15 16 22 F -0.17 -0.21 16.46 2.25 0.04 -0.17 16 23 C -0.06 0.09 9.39 -39.61 -0.37 -0.28 16 24 C -0.15 0.33 8.71 -39.38 -0.34 -0.02 16 25 C -0.10 -0.06 6.15 -25.92 -0.16 -0.22 16 26 C 0.08 -0.07 4.82 -25.92 -0.13 -0.20 16 27 H 0.10 -0.04 7.63 -51.93 -0.40 -0.44 16 28 O -0.55 0.39 13.67 -35.23 -0.48 -0.10 16 29 C -0.16 0.46 7.21 -25.92 -0.19 0.27 16 30 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 31 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 32 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 33 H 0.41 -2.41 8.71 -40.82 -0.36 -2.76 16 34 H 0.08 -0.41 7.46 -51.93 -0.39 -0.79 16 35 H 0.11 -0.51 8.06 -51.93 -0.42 -0.93 16 36 H 0.10 0.09 5.88 -51.93 -0.31 -0.22 16 37 H 0.07 -0.02 8.12 -51.92 -0.42 -0.44 16 38 H 0.03 -0.07 7.49 -51.93 -0.39 -0.46 16 39 H 0.09 0.15 7.78 -51.93 -0.40 -0.25 16 40 H 0.36 0.11 8.38 45.56 0.38 0.49 16 41 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 42 H -0.25 -0.87 7.11 56.52 0.40 -0.47 16 43 H 0.15 -0.21 4.67 -52.49 -0.25 -0.46 16 44 H 0.14 -0.42 7.60 -52.49 -0.40 -0.82 16 45 H 0.14 -0.56 7.16 -52.49 -0.38 -0.94 16 46 H 0.10 0.28 7.64 -51.93 -0.40 -0.11 16 47 H 0.11 0.03 8.14 -51.93 -0.42 -0.39 16 48 H 0.38 -1.86 9.12 45.56 0.42 -1.45 16 49 H 0.12 -0.52 8.14 -51.93 -0.42 -0.94 16 50 H 0.09 -0.32 8.10 -51.92 -0.42 -0.74 16 LS Contribution 427.07 15.07 6.44 6.44 Total: 0.00 -9.66 427.07 -7.60 -17.26 By element: Atomic # 1 Polarization: -8.29 SS G_CDS: -5.43 Total: -13.72 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -1.22 Total: 0.01 kcal Atomic # 7 Polarization: 2.50 SS G_CDS: -0.82 Total: 1.68 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -1.55 Total: -6.42 kcal Atomic # 9 Polarization: -0.61 SS G_CDS: 0.11 Total: -0.50 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: -5.13 Total: -4.75 kcal Total LS contribution 6.44 Total: 6.44 kcal Total: -9.66 -7.60 -17.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -241.577 kcal (2) G-P(sol) polarization free energy of solvation -9.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -251.238 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.596 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.257 kcal (6) G-S(sol) free energy of system = (1) + (5) -258.834 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds