Wall clock time and date at job start Tue Mar 9 2021 13:00:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45208 * 1 3 3 C 1.34230 * 116.99839 * 2 1 4 4 O 1.20830 * 119.99810 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00175 * 180.02562 * 3 2 1 6 6 N 1.46508 * 112.84627 * 324.05749 * 5 3 2 7 7 C 1.34776 * 119.99657 * 293.64395 * 6 5 3 8 8 O 1.21280 * 120.00663 * 354.98442 * 7 6 5 9 9 C 1.50699 * 119.99629 * 174.99095 * 7 6 5 10 10 N 1.46908 * 109.47145 * 179.97438 * 9 7 6 11 11 C 1.46900 * 110.99485 * 293.95069 * 10 9 7 12 12 C 1.39672 * 110.99929 * 169.99384 * 10 9 7 13 13 C 1.38890 * 120.07825 * 239.99825 * 12 10 9 14 14 C 1.50697 * 120.03579 * 359.95657 * 13 12 10 15 15 O 1.42904 * 109.46969 * 75.00102 * 14 13 12 16 16 Si 1.86299 * 109.47247 * 195.00012 * 14 13 12 17 17 C 1.38128 * 119.92543 * 179.97438 * 13 12 10 18 18 C 1.38266 * 120.07554 * 359.97438 * 17 13 12 19 19 C 1.50697 * 119.92276 * 180.02562 * 18 17 13 20 20 F 1.39898 * 109.47015 * 90.00512 * 19 18 17 21 21 F 1.39894 * 109.47104 * 210.00246 * 19 18 17 22 22 F 1.39901 * 109.47363 * 330.00385 * 19 18 17 23 23 C 1.38306 * 120.15018 * 0.03050 * 18 17 13 24 24 C 1.38087 * 120.07642 * 359.73464 * 23 18 17 25 25 C 1.53780 * 113.61635 * 192.86425 * 5 3 2 26 26 C 1.53778 * 87.07996 * 270.79597 * 25 5 3 27 27 H 1.09000 * 113.61522 * 89.19700 * 26 25 5 28 28 O 1.42899 * 113.61691 * 220.01793 * 26 25 5 29 29 C 1.53773 * 113.69513 * 95.32478 * 5 3 2 30 30 H 1.08994 * 109.46767 * 299.99679 * 1 2 3 31 31 H 1.08994 * 109.47121 * 60.00408 * 1 2 3 32 32 H 1.09001 * 109.46572 * 179.97438 * 1 2 3 33 33 H 0.97000 * 120.00004 * 113.64151 * 6 5 3 34 34 H 1.08992 * 109.47592 * 59.99323 * 9 7 6 35 35 H 1.09004 * 109.46841 * 299.99502 * 9 7 6 36 36 H 1.08992 * 109.47077 * 60.00173 * 11 10 9 37 37 H 1.09008 * 109.46402 * 180.02562 * 11 10 9 38 38 H 1.08998 * 109.47013 * 299.99434 * 11 10 9 39 39 H 1.09001 * 109.46879 * 315.00356 * 14 13 12 40 40 H 0.96700 * 113.99934 * 299.99818 * 15 14 13 41 41 H 1.48496 * 109.99994 * 60.00325 * 16 14 13 42 42 H 1.48499 * 109.99808 * 181.31912 * 16 14 13 43 43 H 1.07998 * 119.96044 * 180.02562 * 17 13 12 44 44 H 1.08000 * 119.96372 * 180.02562 * 23 18 17 45 45 H 1.07996 * 120.04343 * 180.27683 * 24 23 18 46 46 H 1.09003 * 113.61339 * 25.34690 * 25 5 3 47 47 H 1.08997 * 113.61725 * 156.24907 * 25 5 3 48 48 H 0.96701 * 114.00321 * 179.97438 * 28 26 25 49 49 H 1.09000 * 113.61643 * 203.68173 * 29 5 3 50 50 H 1.09007 * 113.61354 * 334.57826 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 7 4.1920 0.2130 0.7914 7 6 4.0241 0.1816 2.1283 8 8 3.4324 1.0811 2.6866 9 6 4.5719 -0.9712 2.9296 10 7 4.2606 -0.7711 4.3513 11 6 4.9732 0.3966 4.8868 12 6 4.5505 -1.9183 5.0934 13 6 3.5439 -2.5623 5.8012 14 6 2.1368 -2.0236 5.7703 15 8 1.5362 -2.3321 4.5109 16 14 1.1432 -2.8034 7.1397 17 6 3.8340 -3.6969 6.5336 18 6 5.1247 -4.1919 6.5623 19 6 5.4373 -5.4303 7.3621 20 9 5.2710 -6.5609 6.5551 21 9 6.7595 -5.3713 7.8153 22 9 4.5716 -5.5084 8.4583 23 6 6.1296 -3.5530 5.8588 24 6 5.8455 -2.4211 5.1206 25 6 4.1097 2.6789 0.3132 26 6 4.0436 2.9564 -1.1979 27 1 3.0860 3.3607 -1.5261 28 8 5.1588 3.7003 -1.6927 29 6 4.1760 1.4381 -1.4028 30 1 -0.3632 0.5138 0.8900 31 1 -0.3633 0.5137 -0.8900 32 1 -0.3632 -1.0277 -0.0005 33 1 4.7269 -0.4674 0.3537 34 1 5.6526 -1.0238 2.7985 35 1 4.1185 -1.9008 2.5854 36 1 4.6758 1.2882 4.3351 37 1 4.7252 0.5214 5.9409 38 1 6.0477 0.2459 4.7822 39 1 2.1586 -0.9425 5.9074 40 1 2.0019 -1.9574 3.7507 41 1 1.7574 -2.4900 8.4549 42 1 -0.2549 -2.3043 7.1004 43 1 3.0516 -4.1984 7.0838 44 1 7.1366 -3.9425 5.8830 45 1 6.6297 -1.9252 4.5678 46 1 3.4248 3.2911 0.9000 47 1 5.1239 2.6755 0.7125 48 1 5.1231 3.8777 -2.6426 49 1 5.2084 1.0954 -1.4727 50 1 3.5447 1.0485 -2.2015 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12808048_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:38 Heat of formation + Delta-G solvation = -261.778640 kcal Electronic energy + Delta-G solvation = -42780.694184 eV Core-core repulsion = 36748.014387 eV Total energy + Delta-G solvation = -6032.679797 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 419.148 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -51.18107 -48.70687 -48.64049 -42.61284 -41.70928 -40.58543 -39.71793 -37.71608 -37.62229 -37.60274 -36.44933 -34.17227 -33.01064 -32.11081 -29.78715 -29.05121 -27.66743 -27.16555 -27.00047 -26.23027 -24.99225 -23.58592 -23.07696 -22.09494 -21.47233 -20.75792 -19.54321 -19.49045 -19.44608 -19.37925 -18.56562 -18.32278 -18.18909 -17.98846 -17.63814 -17.37782 -17.01108 -16.80308 -16.35974 -16.31850 -15.99325 -15.59018 -15.55928 -15.53783 -15.38690 -15.12297 -15.08889 -14.93039 -14.79918 -14.77917 -14.62358 -14.60983 -14.43676 -14.24578 -14.11907 -13.83217 -13.65267 -13.63184 -13.44152 -13.20256 -13.18316 -12.99841 -12.85751 -12.66154 -12.54077 -12.23670 -11.95576 -11.92186 -11.80441 -11.46304 -11.22562 -11.08045 -10.94988 -10.38904 -10.22132 -10.09343 -9.68736 -4.99263 -0.36470 0.02119 0.81110 1.28710 1.31684 1.54114 1.58005 1.61311 1.75262 1.89938 2.17632 2.57550 2.70861 2.95119 2.97900 3.11937 3.33954 3.37674 3.44324 3.49273 3.50318 3.67016 3.73747 3.83150 3.99684 4.03349 4.05624 4.09681 4.17223 4.17881 4.20835 4.27955 4.33498 4.42750 4.48505 4.49482 4.56163 4.61143 4.63162 4.67459 4.76305 4.85592 4.87744 4.98280 4.98562 5.11871 5.16870 5.24546 5.38665 5.53243 6.05876 6.37998 6.49296 6.54342 6.79961 7.12470 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.349 6.349 3 C 0.473 3.527 4 O -0.526 6.526 5 C 0.159 3.841 6 N -0.694 5.694 7 C 0.515 3.485 8 O -0.550 6.550 9 C 0.041 3.959 10 N -0.508 5.508 11 C 0.026 3.974 12 C 0.130 3.870 13 C -0.100 4.100 14 C -0.065 4.065 15 O -0.539 6.539 16 Si 0.787 3.213 17 C -0.062 4.062 18 C -0.184 4.184 19 C 0.509 3.491 20 F -0.177 7.177 21 F -0.178 7.178 22 F -0.180 7.180 23 C -0.052 4.052 24 C -0.136 4.136 25 C -0.109 4.109 26 C 0.080 3.920 27 H 0.085 0.915 28 O -0.566 6.566 29 C -0.132 4.132 30 H 0.049 0.951 31 H 0.067 0.933 32 H 0.133 0.867 33 H 0.428 0.572 34 H 0.109 0.891 35 H 0.132 0.868 36 H 0.078 0.922 37 H 0.062 0.938 38 H 0.053 0.947 39 H 0.071 0.929 40 H 0.370 0.630 41 H -0.265 1.265 42 H -0.295 1.295 43 H 0.150 0.850 44 H 0.158 0.842 45 H 0.162 0.838 46 H 0.061 0.939 47 H 0.110 0.890 48 H 0.401 0.599 49 H 0.142 0.858 50 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.801 -4.225 -7.109 10.101 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.264 6.264 3 C 0.315 3.685 4 O -0.414 6.414 5 C 0.069 3.931 6 N -0.351 5.351 7 C 0.302 3.698 8 O -0.426 6.426 9 C -0.088 4.088 10 N -0.230 5.230 11 C -0.120 4.120 12 C 0.036 3.964 13 C -0.101 4.101 14 C -0.174 4.174 15 O -0.346 6.346 16 Si 0.690 3.310 17 C -0.080 4.080 18 C -0.186 4.186 19 C 0.455 3.545 20 F -0.159 7.159 21 F -0.160 7.160 22 F -0.161 7.161 23 C -0.071 4.071 24 C -0.156 4.156 25 C -0.148 4.148 26 C 0.020 3.980 27 H 0.103 0.897 28 O -0.375 6.375 29 C -0.170 4.170 30 H 0.068 0.932 31 H 0.086 0.914 32 H 0.151 0.849 33 H 0.268 0.732 34 H 0.126 0.874 35 H 0.150 0.850 36 H 0.097 0.903 37 H 0.081 0.919 38 H 0.071 0.929 39 H 0.089 0.911 40 H 0.218 0.782 41 H -0.191 1.191 42 H -0.222 1.222 43 H 0.167 0.833 44 H 0.175 0.825 45 H 0.180 0.820 46 H 0.080 0.920 47 H 0.128 0.872 48 H 0.252 0.748 49 H 0.160 0.840 50 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 3.917 -3.428 -4.951 7.184 hybrid contribution 0.889 1.151 -1.017 1.775 sum 4.806 -2.278 -5.968 7.994 Atomic orbital electron populations 1.23536 0.74854 1.05792 1.02193 1.86482 1.24671 1.32124 1.83170 1.23723 0.91716 0.81624 0.71407 1.90689 1.67121 1.37552 1.46031 1.20881 0.84438 0.90659 0.97083 1.45591 1.53155 1.30218 1.06138 1.20977 0.79009 0.87442 0.82324 1.90768 1.42132 1.39093 1.70654 1.22197 1.02859 0.97546 0.86225 1.59129 1.59967 1.02325 1.01589 1.22564 0.96310 0.92404 1.00747 1.18829 0.91967 0.91001 0.94614 1.20153 0.96255 0.95362 0.98337 1.25279 0.94458 1.02489 0.95206 1.86690 1.54833 1.78128 1.14900 0.92663 0.75363 0.90379 0.72642 1.20800 0.95493 0.94683 0.97020 1.19978 0.96690 0.97188 1.04702 1.18339 0.74167 0.84089 0.77923 1.93243 1.95149 1.54417 1.73061 1.93199 1.36425 1.96563 1.89796 1.93204 1.70031 1.96707 1.56205 1.21116 0.99281 0.94021 0.92663 1.21881 0.96848 0.96647 1.00242 1.23269 1.02391 0.92486 0.96636 1.23126 0.90188 0.90566 0.94137 0.89745 1.86485 1.44228 1.75978 1.30793 1.24010 1.04457 0.96876 0.91656 0.93179 0.91418 0.84900 0.73184 0.87373 0.85017 0.90325 0.91916 0.92854 0.91119 0.78150 1.19053 1.22209 0.83259 0.82478 0.82010 0.91974 0.87195 0.74823 0.84050 0.88057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 113.37 1.20 1.20 16 2 O -0.35 -0.97 10.42 -51.42 -0.54 -1.51 16 3 C 0.47 2.57 6.45 71.23 0.46 3.03 16 4 O -0.53 -6.46 15.12 21.95 0.33 -6.13 16 5 C 0.16 -0.21 1.11 3.38 0.00 -0.21 16 6 N -0.69 4.56 5.13 -423.93 -2.17 2.38 16 7 C 0.52 -1.11 7.20 87.66 0.63 -0.48 16 8 O -0.55 -4.30 13.35 -3.03 -0.04 -4.34 16 9 C 0.04 -0.34 4.91 85.56 0.42 0.08 16 10 N -0.51 1.48 3.19 -724.41 -2.31 -0.83 16 11 C 0.03 -0.04 8.94 127.69 1.14 1.10 16 12 C 0.13 -0.42 4.61 38.22 0.18 -0.24 16 13 C -0.10 0.01 5.28 -19.74 -0.10 -0.09 16 14 C -0.07 -0.18 2.30 71.23 0.16 -0.02 16 15 O -0.54 -2.09 12.65 -148.98 -1.89 -3.97 16 16 Si 0.79 1.94 30.17 68.60 2.07 4.01 16 17 C -0.06 0.05 8.01 22.25 0.18 0.22 16 18 C -0.18 0.27 5.46 -19.84 -0.11 0.16 16 19 C 0.51 0.37 3.36 71.23 0.24 0.61 16 20 F -0.18 -0.36 17.30 44.97 0.78 0.42 16 21 F -0.18 -0.26 16.46 44.97 0.74 0.48 16 22 F -0.18 -0.46 16.46 44.97 0.74 0.28 16 23 C -0.05 0.27 9.39 22.25 0.21 0.48 16 24 C -0.14 0.95 8.71 22.40 0.20 1.15 16 25 C -0.11 -0.27 6.15 31.12 0.19 -0.08 16 26 C 0.08 -0.11 4.82 31.12 0.15 0.04 16 27 H 0.08 0.06 7.63 -2.39 -0.02 0.04 16 28 O -0.57 0.96 13.67 -148.98 -2.04 -1.08 16 29 C -0.13 0.97 7.21 31.12 0.22 1.19 16 30 H 0.05 0.18 8.13 -2.39 -0.02 0.16 16 31 H 0.07 -0.03 8.13 -2.39 -0.02 -0.05 16 32 H 0.13 -0.77 8.14 -2.39 -0.02 -0.79 16 33 H 0.43 -6.16 8.71 -92.71 -0.81 -6.97 16 34 H 0.11 -1.55 7.46 -2.39 -0.02 -1.56 16 35 H 0.13 -1.52 8.06 -2.39 -0.02 -1.54 16 36 H 0.08 0.24 5.88 -2.39 -0.01 0.22 16 37 H 0.06 0.02 8.12 -2.38 -0.02 0.00 16 38 H 0.05 -0.33 7.49 -2.39 -0.02 -0.34 16 39 H 0.07 0.39 7.78 -2.39 -0.02 0.37 16 40 H 0.37 0.35 8.38 -74.06 -0.62 -0.27 16 41 H -0.26 -1.34 7.11 99.48 0.71 -0.63 16 42 H -0.29 -2.83 7.11 99.48 0.71 -2.13 16 43 H 0.15 -0.40 4.67 -2.91 -0.01 -0.41 16 44 H 0.16 -1.35 7.60 -2.91 -0.02 -1.37 16 45 H 0.16 -2.00 7.16 -2.91 -0.02 -2.02 16 46 H 0.06 0.58 7.64 -2.39 -0.02 0.57 16 47 H 0.11 0.16 8.14 -2.39 -0.02 0.14 16 48 H 0.40 -4.15 9.12 -74.06 -0.68 -4.82 16 49 H 0.14 -1.69 8.14 -2.39 -0.02 -1.71 16 50 H 0.10 -0.95 8.10 -2.38 -0.02 -0.97 16 Total: 0.00 -26.25 427.07 0.04 -26.21 By element: Atomic # 1 Polarization: -23.09 SS G_CDS: -1.01 Total: -24.09 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: 5.37 Total: 8.16 kcal Atomic # 7 Polarization: 6.04 SS G_CDS: -4.48 Total: 1.55 kcal Atomic # 8 Polarization: -12.86 SS G_CDS: -4.17 Total: -17.03 kcal Atomic # 9 Polarization: -1.08 SS G_CDS: 2.26 Total: 1.18 kcal Atomic # 14 Polarization: 1.94 SS G_CDS: 2.07 Total: 4.01 kcal Total: -26.25 0.04 -26.21 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -235.569 kcal (2) G-P(sol) polarization free energy of solvation -26.249 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -261.818 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.209 kcal (6) G-S(sol) free energy of system = (1) + (5) -261.779 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds