Wall clock time and date at job start Tue Mar 9 2021 13:00:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34231 * 117.00126 * 2 1 4 4 O 1.20825 * 119.99807 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00179 * 180.02562 * 3 2 1 6 6 N 1.46500 * 112.85273 * 35.51101 * 5 3 2 7 7 C 1.34774 * 119.99415 * 66.99461 * 6 5 3 8 8 O 1.21656 * 120.00489 * 354.94952 * 7 6 5 9 9 C 1.46998 * 119.99630 * 175.23190 * 7 6 5 10 10 C 1.35808 * 125.13833 * 179.44344 * 9 7 6 11 11 C 1.46254 * 106.09090 * 179.89141 * 10 9 7 12 12 C 1.39775 * 134.15682 * 180.13396 * 11 10 9 13 13 C 1.50700 * 120.09288 * 0.26576 * 12 11 10 14 14 O 1.42906 * 109.46821 * 74.98349 * 13 12 11 15 15 Si 1.86295 * 109.47243 * 194.98265 * 13 12 11 16 16 C 1.36624 * 119.81239 * 180.25300 * 12 11 10 17 17 C 1.38769 * 120.50012 * 359.97438 * 16 12 11 18 18 C 1.38261 * 120.67236 * 0.02562 * 17 16 12 19 19 O 1.35963 * 120.11916 * 180.02562 * 18 17 16 20 20 C 1.42899 * 117.00319 * 359.97438 * 19 18 17 21 21 C 1.39448 * 119.76065 * 359.97438 * 18 17 16 22 22 O 1.34778 * 133.24195 * 180.02562 * 21 18 17 23 23 C 1.53791 * 113.68931 * 264.24632 * 5 3 2 24 24 C 1.53785 * 87.07858 * 220.00853 * 23 5 3 25 25 H 1.08999 * 113.61353 * 139.98025 * 24 23 5 26 26 O 1.42904 * 113.61298 * 270.88168 * 24 23 5 27 27 C 1.53780 * 87.08349 * 25.43303 * 24 23 5 28 28 H 1.08996 * 109.47082 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.46807 * 299.99884 * 1 2 3 30 30 H 1.09005 * 109.46883 * 59.99917 * 1 2 3 31 31 H 0.96995 * 120.00462 * 246.99736 * 6 5 3 32 32 H 1.08004 * 126.95873 * 0.02562 * 10 9 7 33 33 H 1.09003 * 109.47362 * 314.98578 * 13 12 11 34 34 H 0.96700 * 114.00128 * 60.00033 * 14 13 12 35 35 H 1.48501 * 110.00301 * 58.68229 * 15 13 12 36 36 H 1.48502 * 110.00030 * 180.02562 * 15 13 12 37 37 H 1.08001 * 119.75451 * 179.97438 * 16 12 11 38 38 H 1.08001 * 119.66738 * 179.97438 * 17 16 12 39 39 H 1.09006 * 109.46891 * 300.00231 * 20 19 18 40 40 H 1.09002 * 109.47333 * 59.99433 * 20 19 18 41 41 H 1.09003 * 109.47591 * 179.97438 * 20 19 18 42 42 H 1.08998 * 113.61311 * 334.55100 * 23 5 3 43 43 H 1.09000 * 113.61227 * 105.46231 * 23 5 3 44 44 H 0.96702 * 114.00035 * 277.50028 * 26 24 23 45 45 H 1.09000 * 113.61264 * 220.02088 * 27 24 23 46 46 H 1.08998 * 113.69142 * 89.12679 * 27 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1917 0.2074 -0.7852 7 6 4.0340 0.1739 -2.1233 8 8 3.2987 0.9745 -2.6694 9 6 4.7458 -0.8341 -2.9221 10 6 4.6555 -0.9692 -4.2705 11 6 5.5284 -2.0877 -4.6252 12 6 5.8693 -2.7135 -5.8276 13 6 5.2824 -2.2248 -7.1267 14 8 5.9197 -1.0039 -7.5079 15 14 5.5528 -3.5065 -8.4514 16 6 6.7364 -3.7694 -5.8219 17 6 7.2825 -4.2258 -4.6306 18 6 6.9594 -3.6219 -3.4295 19 8 7.5015 -4.0780 -2.2690 20 6 8.3982 -5.1866 -2.3634 21 6 6.0764 -2.5428 -3.4128 22 8 5.5833 -1.7684 -2.4260 23 6 4.1765 1.4479 1.4004 24 6 5.1721 2.4294 0.7596 25 1 5.3798 3.3047 1.3750 26 8 6.3576 1.8019 0.2666 27 6 4.1096 2.6767 -0.3244 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 4.7192 -0.4752 -0.3418 32 1 4.0613 -0.3702 -4.9447 33 1 4.2134 -2.0527 -7.0005 34 1 6.8747 -1.0827 -7.6380 35 1 4.9220 -4.7903 -8.0525 36 1 4.9789 -3.0362 -9.7378 37 1 6.9989 -4.2525 -6.7515 38 1 7.9663 -5.0617 -4.6416 39 1 7.8769 -6.0395 -2.7983 40 1 9.2441 -4.9170 -2.9957 41 1 8.7578 -5.4489 -1.3684 42 1 3.5010 1.9164 2.1161 43 1 4.6440 0.5427 1.7879 44 1 7.0296 1.6438 0.9438 45 1 4.5230 2.7633 -1.3292 46 1 3.4151 3.4809 -0.0815 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:45 Heat of formation + Delta-G solvation = -150.041966 kcal Electronic energy + Delta-G solvation = -35893.557788 eV Core-core repulsion = 30912.307287 eV Total energy + Delta-G solvation = -4981.250501 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.133 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -43.64798 -42.38903 -40.79403 -40.40925 -39.52835 -39.05899 -37.39464 -36.98546 -36.27861 -34.08496 -33.53764 -31.88242 -30.94854 -29.28670 -28.67095 -27.22609 -26.88951 -26.25868 -24.85856 -23.91892 -22.64368 -22.07976 -21.64753 -20.50289 -19.83721 -19.18812 -18.93956 -18.66188 -18.28305 -17.87024 -17.66266 -17.60716 -17.29149 -16.89696 -16.82469 -16.60461 -16.19923 -15.95763 -15.74788 -15.63032 -15.29195 -15.02010 -14.65466 -14.60183 -14.37185 -14.29112 -14.04035 -13.86398 -13.63087 -13.56307 -13.38972 -13.33577 -13.25863 -13.06732 -12.54461 -12.51793 -12.36349 -12.07048 -12.05885 -11.88483 -11.71447 -11.58794 -11.33202 -11.20503 -10.91292 -10.44109 -10.28083 -9.74982 -8.96804 -5.07225 -0.56949 0.14008 0.71874 1.06413 1.24094 1.32130 1.62718 1.66983 1.82950 1.96661 2.05455 2.09984 2.42811 2.80999 3.08924 3.17580 3.23084 3.42528 3.48734 3.54525 3.64692 3.73967 3.85108 3.88749 4.00393 4.08481 4.09938 4.16653 4.20116 4.21593 4.30803 4.38137 4.45346 4.45916 4.46877 4.48321 4.60532 4.64405 4.68316 4.84682 4.89897 4.90330 5.08367 5.16930 5.24866 5.33718 5.40865 5.64175 6.14847 6.30179 6.51882 6.58403 6.73445 6.90749 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.353 6.353 3 C 0.471 3.529 4 O -0.493 6.493 5 C 0.161 3.839 6 N -0.680 5.680 7 C 0.610 3.390 8 O -0.503 6.503 9 C -0.017 4.017 10 C -0.104 4.104 11 C -0.082 4.082 12 C -0.098 4.098 13 C -0.066 4.066 14 O -0.535 6.535 15 Si 0.686 3.314 16 C -0.088 4.088 17 C -0.178 4.178 18 C 0.151 3.849 19 O -0.310 6.310 20 C 0.024 3.976 21 C 0.048 3.952 22 O -0.171 6.171 23 C -0.157 4.157 24 C 0.085 3.915 25 H 0.087 0.913 26 O -0.543 6.543 27 C -0.116 4.116 28 H 0.102 0.898 29 H 0.065 0.935 30 H 0.065 0.935 31 H 0.417 0.583 32 H 0.174 0.826 33 H 0.114 0.886 34 H 0.379 0.621 35 H -0.255 1.255 36 H -0.252 1.252 37 H 0.141 0.859 38 H 0.149 0.851 39 H 0.060 0.940 40 H 0.061 0.939 41 H 0.105 0.895 42 H 0.114 0.886 43 H 0.097 0.903 44 H 0.385 0.615 45 H 0.096 0.904 46 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.617 -5.368 2.995 9.031 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.269 6.269 3 C 0.312 3.688 4 O -0.379 6.379 5 C 0.072 3.928 6 N -0.333 5.333 7 C 0.396 3.604 8 O -0.379 6.379 9 C -0.067 4.067 10 C -0.124 4.124 11 C -0.083 4.083 12 C -0.099 4.099 13 C -0.177 4.177 14 O -0.341 6.341 15 Si 0.587 3.413 16 C -0.106 4.106 17 C -0.197 4.197 18 C 0.105 3.895 19 O -0.224 6.224 20 C -0.071 4.071 21 C -0.001 4.001 22 O -0.072 6.072 23 C -0.195 4.195 24 C 0.025 3.975 25 H 0.105 0.895 26 O -0.348 6.348 27 C -0.154 4.154 28 H 0.121 0.879 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.254 0.746 32 H 0.191 0.809 33 H 0.131 0.869 34 H 0.226 0.774 35 H -0.179 1.179 36 H -0.177 1.177 37 H 0.158 0.842 38 H 0.166 0.834 39 H 0.079 0.921 40 H 0.080 0.920 41 H 0.123 0.877 42 H 0.132 0.868 43 H 0.115 0.885 44 H 0.233 0.767 45 H 0.115 0.885 46 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 4.566 -4.742 2.010 6.883 hybrid contribution -0.031 -0.417 1.040 1.121 sum 4.535 -5.159 3.050 7.516 Atomic orbital electron populations 1.23332 0.75936 1.03958 1.02767 1.86520 1.23721 1.33072 1.83545 1.23635 0.91161 0.81811 0.72222 1.90681 1.66117 1.36360 1.44710 1.21161 0.84850 0.91093 0.95683 1.45245 1.53121 1.29049 1.05883 1.16592 0.80333 0.82056 0.81454 1.90949 1.36564 1.39094 1.71269 1.21753 0.97664 0.93944 0.93388 1.22734 0.99306 0.96912 0.93485 1.19394 0.99289 0.97224 0.92422 1.19483 0.99536 0.96749 0.94149 1.25070 0.99431 0.95239 0.97950 1.86547 1.25793 1.31208 1.90509 0.95000 0.91331 0.76918 0.78026 1.20381 0.96518 0.95878 0.97783 1.20973 1.05094 1.03250 0.90397 1.17724 0.93501 0.91757 0.86546 1.86175 1.59369 1.48828 1.27981 1.23191 0.92080 0.87084 1.04709 1.18779 0.99942 0.95000 0.86379 1.84058 1.51093 1.37593 1.34497 1.24025 0.99606 1.02586 0.93236 1.22628 0.85089 0.94418 0.95327 0.89507 1.86544 1.27182 1.82041 1.39081 1.23454 0.96241 0.93968 1.01755 0.87921 0.91673 0.91652 0.74582 0.80875 0.86898 0.77420 1.17944 1.17694 0.84210 0.83376 0.92129 0.92035 0.87662 0.86754 0.88471 0.76718 0.88541 0.85797 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.11 16 2 O -0.35 -1.33 10.41 -39.26 -0.41 -1.73 16 3 C 0.47 2.04 6.42 36.00 0.23 2.27 16 4 O -0.49 -3.21 15.66 -18.75 -0.29 -3.50 16 5 C 0.16 0.29 1.00 -132.15 -0.13 0.15 16 6 N -0.68 -1.34 4.52 -49.11 -0.22 -1.56 16 7 C 0.61 2.76 7.27 -12.71 -0.09 2.66 16 8 O -0.50 -3.69 15.55 5.23 0.08 -3.61 16 9 C -0.02 -0.07 7.07 -36.90 -0.26 -0.33 16 10 C -0.10 -0.39 10.68 -37.23 -0.40 -0.79 16 11 C -0.08 -0.25 6.16 -105.21 -0.65 -0.90 16 12 C -0.10 -0.09 5.26 -104.63 -0.55 -0.64 16 13 C -0.07 -0.02 2.70 36.01 0.10 0.07 16 14 O -0.54 -0.44 12.88 -35.23 -0.45 -0.90 16 15 Si 0.69 -0.84 29.93 -169.99 -5.09 -5.93 16 16 C -0.09 0.09 8.62 -39.97 -0.34 -0.25 16 17 C -0.18 0.16 9.03 -39.38 -0.36 -0.20 16 18 C 0.15 0.25 6.70 -39.12 -0.26 -0.01 16 19 O -0.31 -0.40 10.50 -19.62 -0.21 -0.61 16 20 C 0.02 -0.07 9.81 101.05 0.99 0.92 16 21 C 0.05 0.16 7.35 -38.24 -0.28 -0.12 16 22 O -0.17 -0.66 10.29 2.66 0.03 -0.63 16 23 C -0.16 0.29 7.20 -25.91 -0.19 0.11 16 24 C 0.09 -0.12 5.28 -25.92 -0.14 -0.26 16 25 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 26 O -0.54 0.53 13.09 -35.23 -0.46 0.07 16 27 C -0.12 -0.19 6.67 -25.92 -0.17 -0.36 16 28 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.06 0.05 8.13 -51.93 -0.42 -0.38 16 30 H 0.06 0.14 8.13 -51.93 -0.42 -0.28 16 31 H 0.42 0.06 8.39 -40.82 -0.34 -0.28 16 32 H 0.17 0.57 8.06 -52.48 -0.42 0.15 16 33 H 0.11 0.13 7.96 -51.93 -0.41 -0.29 16 34 H 0.38 -1.23 8.70 45.56 0.40 -0.84 16 35 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 36 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 37 H 0.14 -0.57 5.07 -52.49 -0.27 -0.84 16 38 H 0.15 -0.57 6.26 -52.49 -0.33 -0.90 16 39 H 0.06 -0.25 7.66 -51.93 -0.40 -0.64 16 40 H 0.06 -0.26 7.66 -51.93 -0.40 -0.66 16 41 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 42 H 0.11 -0.30 8.10 -51.93 -0.42 -0.72 16 43 H 0.10 -0.33 8.09 -51.93 -0.42 -0.75 16 44 H 0.38 -2.00 9.12 45.56 0.42 -1.59 16 45 H 0.10 0.36 7.41 -51.93 -0.38 -0.03 16 46 H 0.12 0.18 7.35 -51.93 -0.38 -0.20 16 LS Contribution 395.34 15.07 5.96 5.96 Total: 0.00 -12.20 395.34 -7.18 -19.37 By element: Atomic # 1 Polarization: -5.70 SS G_CDS: -4.67 Total: -10.37 kcal Atomic # 6 Polarization: 4.88 SS G_CDS: -1.43 Total: 3.44 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.22 Total: -1.56 kcal Atomic # 8 Polarization: -9.19 SS G_CDS: -1.71 Total: -10.91 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.09 Total: -5.93 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -12.20 -7.18 -19.37 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.669 kcal (2) G-P(sol) polarization free energy of solvation -12.198 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.867 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.373 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.042 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds