Wall clock time and date at job start Tue Mar 9 2021 13:01:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34231 * 117.00090 * 2 1 4 4 O 1.20832 * 119.99401 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00582 * 179.97438 * 3 2 1 6 6 N 1.46500 * 112.84575 * 25.33478 * 5 3 2 7 7 C 1.34785 * 120.00002 * 309.66357 * 6 5 3 8 8 O 1.21275 * 119.99963 * 0.02562 * 7 6 5 9 9 C 1.50704 * 119.99912 * 180.02562 * 7 6 5 10 10 N 1.46501 * 109.47036 * 180.02562 * 9 7 6 11 11 C 1.36831 * 125.06490 * 265.08328 * 10 9 7 12 12 C 1.34231 * 109.93657 * 180.34279 * 11 10 9 13 13 C 1.50706 * 126.49949 * 179.71710 * 12 11 10 14 14 O 1.42898 * 109.47176 * 255.04162 * 13 12 11 15 15 Si 1.86306 * 109.47055 * 15.04177 * 13 12 11 16 16 C 1.46484 * 107.00213 * 359.75218 * 12 11 10 17 17 C 1.39592 * 134.04094 * 179.97438 * 16 12 11 18 18 C 1.36663 * 119.76983 * 180.02562 * 17 16 12 19 19 C 1.38791 * 120.52190 * 359.97438 * 18 17 16 20 20 C 1.37780 * 120.67101 * 0.02562 * 19 18 17 21 21 C 1.37692 * 125.05907 * 84.99675 * 10 9 7 22 22 C 1.53774 * 113.61737 * 254.13964 * 5 3 2 23 23 C 1.54048 * 86.98552 * 219.97649 * 22 5 3 24 24 H 1.09010 * 113.69399 * 139.98536 * 23 22 5 25 25 O 1.42896 * 113.61457 * 270.88117 * 23 22 5 26 26 C 1.53778 * 113.61583 * 156.52600 * 5 3 2 27 27 H 1.09003 * 109.46655 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.47328 * 299.99392 * 1 2 3 29 29 H 1.08994 * 109.47448 * 60.00385 * 1 2 3 30 30 H 0.96999 * 120.00512 * 129.66775 * 6 5 3 31 31 H 1.08996 * 109.46974 * 60.00310 * 9 7 6 32 32 H 1.08997 * 109.47252 * 300.00364 * 9 7 6 33 33 H 1.08002 * 125.03246 * 0.09206 * 11 10 9 34 34 H 1.09005 * 109.46903 * 135.03862 * 13 12 11 35 35 H 0.96696 * 114.00040 * 59.99621 * 14 13 12 36 36 H 1.48497 * 110.00044 * 58.67611 * 15 13 12 37 37 H 1.48496 * 110.00069 * 180.02562 * 15 13 12 38 38 H 1.08002 * 120.11376 * 0.03135 * 17 16 12 39 39 H 1.07998 * 119.73772 * 180.02562 * 18 17 16 40 40 H 1.07999 * 119.66055 * 180.02562 * 19 18 17 41 41 H 1.07998 * 120.11554 * 179.97438 * 20 19 18 42 42 H 1.09002 * 113.61381 * 334.48186 * 22 5 3 43 43 H 1.09003 * 113.61577 * 105.38186 * 22 5 3 44 44 H 0.96703 * 114.00010 * 277.48974 * 25 23 22 45 45 H 1.08999 * 113.61686 * 254.61451 * 26 5 3 46 46 H 1.08995 * 113.61381 * 25.52148 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1985 0.0861 -0.5766 7 6 3.8373 -1.1417 -0.1539 8 8 2.9886 -1.2623 0.7039 9 6 4.4880 -2.3646 -0.7473 10 7 3.9267 -3.5666 -0.1258 11 6 4.4722 -4.2282 0.9405 12 6 3.7148 -5.2905 1.2563 13 6 3.9739 -6.2786 2.3643 14 8 4.4600 -7.5017 1.8078 15 14 5.2446 -5.5805 3.5343 16 6 2.5892 -5.3077 0.3191 17 6 1.4874 -6.1462 0.1410 18 6 0.5895 -5.8844 -0.8554 19 6 0.7637 -4.7908 -1.6919 20 6 1.8440 -3.9502 -1.5339 21 6 2.7706 -4.1980 -0.5267 22 6 4.1608 1.6921 1.3560 23 6 5.1653 2.5471 0.5605 24 1 5.3687 3.5180 1.0125 25 8 6.3551 1.8435 0.1982 26 6 4.1140 2.5978 -0.5607 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5137 0.8900 29 1 -0.3634 0.5137 -0.8900 30 1 4.8771 0.1825 -1.2630 31 1 5.5621 -2.3290 -0.5654 32 1 4.3020 -2.3904 -1.8210 33 1 5.3801 -3.9407 1.4500 34 1 3.0471 -6.4686 2.9057 35 1 5.2841 -7.4076 1.3108 36 1 4.7648 -4.2921 4.0955 37 1 5.5095 -6.5457 4.6313 38 1 1.3451 -6.9988 0.7885 39 1 -0.2630 -6.5333 -0.9924 40 1 0.0453 -4.5967 -2.4746 41 1 1.9710 -3.1020 -2.1902 42 1 3.4779 2.2791 1.9702 43 1 4.6220 0.8693 1.9023 44 1 7.0202 1.8083 0.8993 45 1 4.5375 2.5057 -1.5608 46 1 3.4184 3.4320 -0.4697 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12808048_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:00 Heat of formation + Delta-G solvation = -77.154068 kcal Electronic energy + Delta-G solvation = -34069.436368 eV Core-core repulsion = 29507.747377 eV Total energy + Delta-G solvation = -4561.688991 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.145 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.61642 -42.22044 -40.40004 -39.70895 -37.97628 -37.51802 -37.30425 -36.25610 -34.29570 -33.72511 -31.33556 -30.10533 -29.40861 -28.67059 -27.29445 -26.65690 -25.55122 -23.65947 -22.91467 -22.49438 -21.78741 -20.58029 -20.47828 -19.20460 -18.90783 -18.40383 -18.21484 -17.72847 -17.44684 -17.33163 -17.10574 -16.70504 -16.31033 -16.05986 -15.89392 -15.60371 -15.37494 -15.26739 -14.97666 -14.68647 -14.57852 -14.40355 -14.27817 -13.97760 -13.91858 -13.76209 -13.55508 -13.40981 -13.22357 -12.89315 -12.61512 -12.56863 -12.42708 -12.10894 -12.07127 -12.00049 -11.66232 -11.65157 -11.59578 -11.09254 -10.91647 -10.38939 -10.25972 -10.21609 -9.00303 -8.50598 -5.02765 0.29597 0.80377 1.06025 1.38451 1.43893 1.50588 1.67262 1.78158 1.80566 2.03947 2.06457 2.68088 2.93686 3.12273 3.22662 3.36573 3.52218 3.58751 3.66663 3.74768 3.77591 3.86870 3.88493 4.09010 4.09964 4.29504 4.32482 4.36814 4.37703 4.39497 4.40740 4.51218 4.59280 4.61159 4.65816 4.73028 4.74357 4.81291 4.92151 4.99898 5.18301 5.27246 5.49345 5.66428 5.82788 5.88264 5.91696 6.16474 6.32371 6.36030 6.39292 6.76444 6.78634 7.08393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.312 6.312 3 C 0.465 3.535 4 O -0.508 6.508 5 C 0.162 3.838 6 N -0.700 5.700 7 C 0.485 3.515 8 O -0.473 6.473 9 C 0.096 3.904 10 N -0.464 5.464 11 C 0.070 3.930 12 C -0.199 4.199 13 C -0.028 4.028 14 O -0.542 6.542 15 Si 0.682 3.318 16 C -0.086 4.086 17 C -0.067 4.067 18 C -0.146 4.146 19 C -0.098 4.098 20 C -0.124 4.124 21 C 0.112 3.888 22 C -0.161 4.161 23 C 0.086 3.914 24 H 0.085 0.915 25 O -0.548 6.548 26 C -0.115 4.115 27 H 0.099 0.901 28 H 0.060 0.940 29 H 0.058 0.942 30 H 0.412 0.588 31 H 0.124 0.876 32 H 0.116 0.884 33 H 0.170 0.830 34 H 0.110 0.890 35 H 0.376 0.624 36 H -0.256 1.256 37 H -0.255 1.255 38 H 0.121 0.879 39 H 0.121 0.879 40 H 0.123 0.877 41 H 0.114 0.886 42 H 0.105 0.895 43 H 0.090 0.910 44 H 0.388 0.612 45 H 0.095 0.905 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.926 2.894 -2.942 8.062 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.226 6.226 3 C 0.307 3.693 4 O -0.397 6.397 5 C 0.073 3.927 6 N -0.357 5.357 7 C 0.269 3.731 8 O -0.344 6.344 9 C -0.030 4.030 10 N -0.147 5.147 11 C -0.055 4.055 12 C -0.206 4.206 13 C -0.140 4.140 14 O -0.347 6.347 15 Si 0.584 3.416 16 C -0.091 4.091 17 C -0.085 4.085 18 C -0.165 4.165 19 C -0.118 4.118 20 C -0.145 4.145 21 C 0.007 3.993 22 C -0.199 4.199 23 C 0.027 3.973 24 H 0.103 0.897 25 O -0.355 6.355 26 C -0.153 4.153 27 H 0.118 0.882 28 H 0.079 0.921 29 H 0.077 0.923 30 H 0.249 0.751 31 H 0.142 0.858 32 H 0.134 0.866 33 H 0.187 0.813 34 H 0.128 0.872 35 H 0.223 0.777 36 H -0.181 1.181 37 H -0.180 1.180 38 H 0.139 0.861 39 H 0.139 0.861 40 H 0.141 0.859 41 H 0.132 0.868 42 H 0.123 0.877 43 H 0.109 0.891 44 H 0.236 0.764 45 H 0.114 0.886 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 5.518 3.268 -1.867 6.679 hybrid contribution -0.362 0.308 0.030 0.476 sum 5.156 3.576 -1.836 6.538 Atomic orbital electron populations 1.23290 0.77469 1.03703 1.01992 1.87012 1.22350 1.31078 1.82197 1.23648 0.91055 0.82298 0.72298 1.90687 1.66252 1.36719 1.45994 1.21041 0.85480 0.87809 0.98388 1.45501 1.43342 1.03525 1.43336 1.21023 0.83582 0.84435 0.84085 1.90857 1.28802 1.85388 1.29303 1.21522 0.99817 0.82258 0.99410 1.43201 1.20986 1.22397 1.28142 1.21483 0.99460 0.93850 0.90697 1.20612 0.97833 1.00051 1.02128 1.24318 1.04820 0.86534 0.98291 1.86501 1.44865 1.29843 1.73504 0.95418 0.85735 0.79688 0.80800 1.18932 0.96557 0.96355 0.97208 1.20294 0.92557 0.98126 0.97556 1.20654 1.00194 0.98755 0.96894 1.20803 0.96881 0.94703 0.99378 1.19944 0.94910 1.01268 0.98366 1.18134 0.88816 0.94172 0.98152 1.24120 0.99347 1.01396 0.95087 1.22649 0.84794 0.94621 0.95261 0.89681 1.86386 1.27521 1.77730 1.43814 1.23437 0.96783 0.94844 1.00231 0.88218 0.92126 0.92286 0.75128 0.85812 0.86561 0.81289 0.87248 0.77724 1.18105 1.17967 0.86093 0.86054 0.85866 0.86774 0.87672 0.89112 0.76384 0.88627 0.85540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 10.56 101.05 1.07 1.14 16 2 O -0.31 -1.31 6.31 -47.61 -0.30 -1.61 16 3 C 0.47 1.59 7.07 36.00 0.25 1.84 16 4 O -0.51 -2.75 15.79 -18.76 -0.30 -3.04 16 5 C 0.16 -0.03 1.11 -132.16 -0.15 -0.17 16 6 N -0.70 1.35 4.76 -47.93 -0.23 1.12 16 7 C 0.49 -0.03 7.25 -10.98 -0.08 -0.11 16 8 O -0.47 -2.05 12.95 -19.67 -0.25 -2.30 16 9 C 0.10 -0.26 6.48 -5.19 -0.03 -0.29 16 10 N -0.46 -0.34 2.27 -115.71 -0.26 -0.60 16 11 C 0.07 0.02 9.89 -16.73 -0.17 -0.15 16 12 C -0.20 -0.42 5.57 -102.71 -0.57 -1.00 16 13 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 14 O -0.54 -0.81 12.88 -35.23 -0.45 -1.26 16 15 Si 0.68 -0.25 30.76 -169.99 -5.23 -5.48 16 16 C -0.09 -0.35 6.35 -105.14 -0.67 -1.01 16 17 C -0.07 -0.25 10.05 -39.65 -0.40 -0.64 16 18 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 19 C -0.10 -0.20 10.01 -39.54 -0.40 -0.60 16 20 C -0.12 -0.30 10.00 -39.43 -0.39 -0.69 16 21 C 0.11 0.35 6.80 -83.99 -0.57 -0.23 16 22 C -0.16 0.19 7.27 -25.78 -0.19 0.00 16 23 C 0.09 -0.28 5.28 -25.78 -0.14 -0.41 16 24 H 0.09 -0.37 8.14 -51.92 -0.42 -0.79 16 25 O -0.55 2.13 12.95 -35.23 -0.46 1.68 16 26 C -0.12 0.24 7.06 -25.92 -0.18 0.06 16 27 H 0.10 0.14 8.14 -51.93 -0.42 -0.28 16 28 H 0.06 0.17 8.13 -51.93 -0.42 -0.26 16 29 H 0.06 0.11 8.13 -51.93 -0.42 -0.31 16 30 H 0.41 -1.81 8.47 -40.82 -0.35 -2.16 16 31 H 0.12 -0.75 8.12 -51.93 -0.42 -1.17 16 32 H 0.12 -0.51 8.14 -51.93 -0.42 -0.94 16 33 H 0.17 -0.56 6.35 -52.49 -0.33 -0.89 16 34 H 0.11 0.26 7.96 -51.93 -0.41 -0.15 16 35 H 0.38 -0.98 8.70 45.56 0.40 -0.59 16 36 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 37 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 38 H 0.12 0.35 8.06 -52.49 -0.42 -0.07 16 39 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 40 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 41 H 0.11 0.09 8.06 -52.49 -0.42 -0.34 16 42 H 0.10 -0.07 8.09 -51.93 -0.42 -0.49 16 43 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.39 -2.76 9.12 45.56 0.42 -2.34 16 45 H 0.10 -0.29 8.11 -51.93 -0.42 -0.71 16 46 H 0.13 -0.19 7.38 -51.93 -0.38 -0.58 16 LS Contribution 390.02 15.07 5.88 5.88 Total: 0.00 -12.63 390.02 -9.85 -22.48 By element: Atomic # 1 Polarization: -8.54 SS G_CDS: -5.35 Total: -13.89 kcal Atomic # 6 Polarization: -0.06 SS G_CDS: -2.90 Total: -2.96 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -0.49 Total: 0.52 kcal Atomic # 8 Polarization: -4.78 SS G_CDS: -1.76 Total: -6.54 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.23 Total: -5.48 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -12.63 -9.85 -22.48 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.671 kcal (2) G-P(sol) polarization free energy of solvation -12.631 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.301 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.483 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds