Wall clock time and date at job start Tue Mar 9 2021 13:03:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.46744 * 2 1 4 4 C 1.50698 * 109.47148 * 240.00302 * 2 1 3 5 5 C 1.37815 * 119.93474 * 254.99456 * 4 2 1 6 6 C 1.39671 * 119.87688 * 179.70134 * 5 4 2 7 7 C 1.47724 * 120.11860 * 180.30566 * 6 5 4 8 8 O 1.21569 * 120.00142 * 359.97438 * 7 6 5 9 9 N 1.34781 * 120.00133 * 180.02562 * 7 6 5 10 10 C 1.46502 * 119.99991 * 179.97438 * 9 7 6 11 11 C 1.53002 * 109.46738 * 180.02562 * 10 9 7 12 12 H 1.08993 * 112.85457 * 43.80184 * 11 10 9 13 13 C 1.53782 * 113.60872 * 175.00079 * 11 10 9 14 14 C 1.53786 * 87.08228 * 139.97705 * 13 11 10 15 15 H 1.08995 * 113.61402 * 219.93558 * 14 13 11 16 16 O 1.42895 * 113.61504 * 89.11026 * 14 13 11 17 17 C 1.53784 * 87.08028 * 334.56518 * 14 13 11 18 18 C 1.39637 * 119.76595 * 0.27549 * 6 5 4 19 19 C 1.37851 * 119.87440 * 0.02562 * 18 6 5 20 20 C 1.38638 * 120.12383 * 359.97438 * 19 18 6 21 21 F 1.35099 * 119.87894 * 180.02562 * 20 19 18 22 22 H 0.96698 * 114.00384 * 59.99926 * 1 2 3 23 23 H 1.09001 * 109.47220 * 119.99445 * 2 1 3 24 24 H 1.48500 * 109.99966 * 59.99967 * 3 2 1 25 25 H 1.48502 * 109.99832 * 181.31655 * 3 2 1 26 26 H 1.08002 * 120.06547 * 359.97438 * 5 4 2 27 27 H 0.96995 * 119.99703 * 359.97438 * 9 7 6 28 28 H 1.09002 * 109.46778 * 299.99953 * 10 9 7 29 29 H 1.08994 * 109.47434 * 59.99716 * 10 9 7 30 30 H 1.08995 * 113.61259 * 254.52040 * 13 11 10 31 31 H 1.09003 * 113.61834 * 25.43066 * 13 11 10 32 32 H 0.96698 * 114.00436 * 180.02562 * 16 14 13 33 33 H 1.09000 * 113.61230 * 270.88719 * 17 14 13 34 34 H 1.08998 * 113.61622 * 139.97955 * 17 14 13 35 35 H 1.07998 * 120.06105 * 179.97438 * 18 6 5 36 36 H 1.08003 * 119.93897 * 179.97438 * 19 18 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.4521 -1.9820 -1.1260 6 6 2.9116 -2.6417 -2.2682 7 6 3.4646 -4.0075 -2.1633 8 8 3.5208 -4.5592 -1.0815 9 7 3.9078 -4.6417 -3.2670 10 6 4.4567 -5.9960 -3.1629 11 6 4.8840 -6.4809 -4.5496 12 1 5.4201 -5.7206 -5.1174 13 6 5.5874 -7.8484 -4.5342 14 6 4.8027 -8.1784 -5.8150 15 1 4.4340 -9.2035 -5.8492 16 8 5.4755 -7.7903 -7.0144 17 6 3.7530 -7.1597 -5.3403 18 6 2.8458 -2.0058 -3.5096 19 6 2.3287 -0.7313 -3.6017 20 6 1.8740 -0.0810 -2.4649 21 9 1.3677 1.1678 -2.5609 22 1 -0.3934 0.4417 -0.7650 23 1 1.7923 -0.5137 0.8900 24 1 1.5613 2.4679 1.2085 25 1 3.5345 1.7704 -0.0321 26 1 2.5008 -2.4694 -0.1634 27 1 3.8633 -4.2014 -4.1301 28 1 5.3212 -5.9875 -2.4989 29 1 3.6968 -6.6662 -2.7613 30 1 6.6649 -7.7868 -4.6860 31 1 5.3138 -8.4706 -3.6820 32 1 4.9868 -7.9949 -7.8234 33 1 2.9780 -7.5936 -4.7085 34 1 3.3498 -6.5421 -6.1429 35 1 3.2001 -2.5113 -4.3958 36 1 2.2777 -0.2384 -4.5614 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12857620_12496548.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:22 Heat of formation + Delta-G solvation = -104.316475 kcal Electronic energy + Delta-G solvation = -21549.432280 eV Core-core repulsion = 17915.655418 eV Total energy + Delta-G solvation = -3633.776862 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.110 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -50.48935 -41.48064 -40.59200 -39.53427 -37.68173 -36.59427 -35.07936 -33.01108 -32.13523 -29.03265 -27.00792 -26.88262 -25.05480 -23.61998 -23.37945 -21.60420 -20.66495 -19.35935 -18.75743 -18.29892 -17.90059 -17.81340 -17.12373 -16.92685 -16.61127 -16.30864 -16.10776 -15.71671 -15.54280 -15.14765 -15.12219 -14.53014 -14.50607 -14.14674 -14.04067 -13.92642 -13.54205 -13.45539 -13.05607 -12.93236 -12.36868 -12.28563 -12.01661 -11.93709 -11.33979 -11.16102 -10.81269 -10.67073 -10.26612 -10.17435 -9.91517 -4.83723 -0.59145 -0.10261 1.20751 1.54707 1.67636 1.94065 2.00819 2.51292 2.81379 2.93968 3.19924 3.34936 3.41968 3.44639 3.48653 3.53656 3.62125 3.76333 3.82056 4.00410 4.14190 4.22433 4.34028 4.48492 4.54474 4.58735 4.64671 4.68716 4.71549 4.74270 4.87884 4.89510 4.99587 5.01334 5.16354 5.33509 5.47159 6.33833 6.43887 6.54738 7.08305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.069 4.069 3 Si 0.672 3.328 4 C -0.154 4.154 5 C -0.014 4.014 6 C -0.142 4.142 7 C 0.559 3.441 8 O -0.531 6.531 9 N -0.724 5.724 10 C 0.127 3.873 11 C -0.118 4.118 12 H 0.101 0.899 13 C -0.124 4.124 14 C 0.077 3.923 15 H 0.071 0.929 16 O -0.552 6.552 17 C -0.168 4.168 18 C -0.057 4.057 19 C -0.149 4.149 20 C 0.122 3.878 21 F -0.106 7.106 22 H 0.378 0.622 23 H 0.120 0.880 24 H -0.246 1.246 25 H -0.253 1.253 26 H 0.148 0.852 27 H 0.401 0.599 28 H 0.073 0.927 29 H 0.073 0.927 30 H 0.081 0.919 31 H 0.099 0.901 32 H 0.383 0.617 33 H 0.092 0.908 34 H 0.074 0.926 35 H 0.139 0.861 36 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.624 -0.367 -6.749 6.788 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.179 4.179 3 Si 0.572 3.428 4 C -0.155 4.155 5 C -0.033 4.033 6 C -0.145 4.145 7 C 0.346 3.654 8 O -0.408 6.408 9 N -0.376 5.376 10 C 0.004 3.996 11 C -0.137 4.137 12 H 0.119 0.881 13 C -0.162 4.162 14 C 0.018 3.982 15 H 0.089 0.911 16 O -0.358 6.358 17 C -0.206 4.206 18 C -0.075 4.075 19 C -0.168 4.168 20 C 0.102 3.898 21 F -0.085 7.085 22 H 0.225 0.775 23 H 0.138 0.862 24 H -0.171 1.171 25 H -0.178 1.178 26 H 0.166 0.834 27 H 0.236 0.764 28 H 0.091 0.909 29 H 0.091 0.909 30 H 0.100 0.900 31 H 0.117 0.883 32 H 0.231 0.769 33 H 0.110 0.890 34 H 0.093 0.907 35 H 0.157 0.843 36 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 0.435 -0.258 -4.556 4.584 hybrid contribution -0.460 -0.429 -0.785 1.006 sum -0.025 -0.687 -5.341 5.385 Atomic orbital electron populations 1.86560 1.16520 1.81522 1.49203 1.25026 0.85557 1.10792 0.96554 0.94612 0.81399 0.78763 0.87991 1.20361 1.03888 0.96466 0.94802 1.21057 0.91532 0.91521 0.99146 1.20023 1.04752 0.95316 0.94459 1.18122 0.77782 0.85285 0.84200 1.90824 1.55465 1.67309 1.27220 1.45886 1.63966 1.17526 1.10201 1.21473 0.98929 0.82247 0.96945 1.22760 0.98142 0.97638 0.95167 0.88103 1.23027 1.01032 0.95818 0.96339 1.22674 0.93302 0.96497 0.85759 0.91144 1.86460 1.48382 1.85324 1.15608 1.23763 0.97009 0.99160 1.00637 1.21195 0.95665 0.93882 0.96791 1.21085 1.01609 0.95822 0.98247 1.17767 0.97521 0.80237 0.94242 1.91178 1.84508 1.37867 1.94912 0.77484 0.86215 1.17104 1.17751 0.83387 0.76398 0.90889 0.90886 0.90002 0.88273 0.76900 0.88994 0.90702 0.84330 0.83212 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.62 12.88 -35.23 -0.45 -1.07 16 2 C -0.07 -0.04 2.81 36.00 0.10 0.06 16 3 Si 0.67 0.27 29.55 -169.99 -5.02 -4.76 16 4 C -0.15 -0.05 4.78 -104.62 -0.50 -0.55 16 5 C -0.01 -0.02 9.21 -39.20 -0.36 -0.38 16 6 C -0.14 -0.05 5.87 -104.96 -0.62 -0.67 16 7 C 0.56 1.08 7.77 -12.38 -0.10 0.99 16 8 O -0.53 -3.15 16.34 5.30 0.09 -3.06 16 9 N -0.72 0.72 5.51 -61.29 -0.34 0.39 16 10 C 0.13 -0.11 5.51 -4.04 -0.02 -0.14 16 11 C -0.12 0.26 3.69 -89.80 -0.33 -0.07 16 12 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 13 C -0.12 0.22 7.47 -25.92 -0.19 0.02 16 14 C 0.08 -0.15 5.28 -25.91 -0.14 -0.28 16 15 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 16 O -0.55 0.43 13.59 -35.23 -0.48 -0.05 16 17 C -0.17 0.45 7.46 -25.91 -0.19 0.26 16 18 C -0.06 0.13 9.54 -39.20 -0.37 -0.24 16 19 C -0.15 0.36 10.01 -39.58 -0.40 -0.04 16 20 C 0.12 -0.12 6.63 -39.27 -0.26 -0.38 16 21 F -0.11 0.19 13.46 2.25 0.03 0.22 16 22 H 0.38 -0.91 8.45 45.56 0.38 -0.53 16 23 H 0.12 0.07 7.77 -51.93 -0.40 -0.33 16 24 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 25 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 26 H 0.15 0.25 7.59 -52.49 -0.40 -0.15 16 27 H 0.40 -1.48 6.50 -40.82 -0.27 -1.75 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.07 -0.02 7.84 -51.93 -0.41 -0.42 16 30 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.10 -0.27 8.10 -51.93 -0.42 -0.69 16 32 H 0.38 -1.80 9.12 45.56 0.42 -1.38 16 33 H 0.09 -0.26 7.90 -51.93 -0.41 -0.67 16 34 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 35 H 0.14 -0.75 6.40 -52.49 -0.34 -1.08 16 36 H 0.15 -0.71 8.06 -52.48 -0.42 -1.13 16 LS Contribution 310.00 15.07 4.67 4.67 Total: 0.00 -8.21 310.00 -8.46 -16.67 By element: Atomic # 1 Polarization: -8.02 SS G_CDS: -3.57 Total: -11.59 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -3.38 Total: -1.42 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -0.34 Total: 0.39 kcal Atomic # 8 Polarization: -3.34 SS G_CDS: -0.85 Total: -4.18 kcal Atomic # 9 Polarization: 0.19 SS G_CDS: 0.03 Total: 0.22 kcal Atomic # 14 Polarization: 0.27 SS G_CDS: -5.02 Total: -4.76 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -8.21 -8.46 -16.67 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_12496548.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.650 kcal (2) G-P(sol) polarization free energy of solvation -8.207 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.857 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.459 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.666 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds