Wall clock time and date at job start Tue Mar 9 2021 13:04:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37865 * 126.45703 * 2 1 4 4 C 1.46685 * 126.23448 * 0.03543 * 3 2 1 5 5 O 1.21689 * 119.99794 * 359.97438 * 4 3 2 6 6 N 1.34778 * 120.00065 * 179.97438 * 4 3 2 7 7 C 1.46500 * 120.00122 * 179.97438 * 6 4 3 8 8 C 1.52996 * 109.47182 * 180.02562 * 7 6 4 9 9 H 1.09001 * 112.85165 * 316.19390 * 8 7 6 10 10 C 1.53780 * 113.61687 * 87.50558 * 8 7 6 11 11 C 1.53778 * 87.07927 * 139.97972 * 10 8 7 12 12 H 1.08999 * 113.61614 * 220.01419 * 11 10 8 13 13 O 1.42904 * 113.69232 * 89.12920 * 11 10 8 14 14 C 1.53774 * 87.08661 * 334.56763 * 11 10 8 15 15 N 1.37650 * 107.53743 * 179.97438 * 3 2 1 16 16 C 1.35535 * 108.63857 * 0.02562 * 15 3 2 17 17 C 1.50707 * 125.56141 * 179.97438 * 16 15 3 18 18 O 1.42903 * 109.46442 * 245.02117 * 17 16 15 19 19 Si 1.86293 * 109.47256 * 5.01683 * 17 16 15 20 20 C 1.35450 * 108.87488 * 0.23963 * 16 15 3 21 21 H 1.09005 * 109.46747 * 89.99712 * 1 2 3 22 22 H 1.08991 * 109.47504 * 209.99950 * 1 2 3 23 23 H 1.08999 * 109.47184 * 330.00301 * 1 2 3 24 24 H 0.97005 * 119.99963 * 0.02562 * 6 4 3 25 25 H 1.09004 * 109.47214 * 300.00532 * 7 6 4 26 26 H 1.09000 * 109.46682 * 60.00517 * 7 6 4 27 27 H 1.09000 * 113.61273 * 254.52948 * 10 8 7 28 28 H 1.08998 * 113.61227 * 25.43304 * 10 8 7 29 29 H 0.96709 * 113.99922 * 82.45946 * 13 11 10 30 30 H 1.09004 * 113.61424 * 270.88890 * 14 11 10 31 31 H 1.08995 * 113.61822 * 139.97953 * 14 11 10 32 32 H 0.96996 * 125.68800 * 179.97438 * 15 3 2 33 33 H 1.08999 * 109.47345 * 125.02187 * 17 16 15 34 34 H 0.96700 * 114.00311 * 60.00230 * 18 17 16 35 35 H 1.48501 * 109.99918 * 58.68485 * 19 17 16 36 36 H 1.48506 * 109.99973 * 180.02562 * 19 17 16 37 37 H 1.07999 * 126.07039 * 179.72343 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5093 0.0007 5 8 0.7027 2.7766 0.0009 6 7 2.8037 3.4999 0.0012 7 6 2.3678 4.8986 0.0013 8 6 3.5933 5.8146 0.0012 9 1 4.3664 5.4874 0.6963 10 6 4.1232 6.1345 -1.4066 11 6 4.3563 7.5701 -0.9070 12 1 4.0994 8.3346 -1.6402 13 8 5.6445 7.7725 -0.3224 14 6 3.2462 7.3078 0.1243 15 7 3.6284 0.6625 0.0006 16 6 3.6217 -0.6928 0.0004 17 6 4.8434 -1.5753 0.0003 18 8 4.8963 -2.3151 -1.2211 19 14 6.3713 -0.5206 0.1541 20 6 2.3379 -1.1247 -0.0057 21 1 -0.3633 0.0001 -1.0277 22 1 -0.3634 -0.8899 0.5138 23 1 -0.3633 0.8900 0.5138 24 1 3.7500 3.2868 0.0006 25 1 1.7693 5.0928 -0.8887 26 1 1.7690 5.0924 0.8913 27 1 5.0421 5.6049 -1.6579 28 1 3.3645 6.0611 -2.1857 29 1 6.3470 7.9380 -0.9662 30 1 2.2478 7.5551 -0.2365 31 1 3.4572 7.7254 1.1087 32 1 4.4191 1.2243 0.0004 33 1 4.7926 -2.2663 0.8418 34 1 4.9430 -1.7631 -2.0137 35 1 6.3135 0.2778 1.4049 36 1 7.5831 -1.3791 0.1547 37 1 2.0136 -2.1548 -0.0116 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12857620_13940406.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:23 Heat of formation + Delta-G solvation = -46.634915 kcal Electronic energy + Delta-G solvation = -20273.585677 eV Core-core repulsion = 17019.026661 eV Total energy + Delta-G solvation = -3254.559016 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -42.58806 -40.86860 -39.82940 -37.80800 -36.58755 -35.08609 -33.53783 -31.59840 -29.18313 -28.24077 -26.90392 -26.52433 -23.79570 -22.36943 -21.59544 -20.94877 -20.22320 -19.69414 -18.19237 -17.89762 -17.08495 -16.85595 -16.67096 -16.50867 -16.04824 -15.71569 -15.14266 -14.98762 -14.85886 -14.28699 -14.23394 -13.95405 -13.82638 -13.54332 -13.47288 -13.35595 -13.04727 -12.92511 -12.57661 -12.27707 -12.23979 -12.01440 -11.34254 -11.01795 -10.76360 -10.64732 -10.18970 -9.77199 -9.13340 -5.40629 0.36325 0.95422 1.28621 1.63516 1.68437 1.91462 2.06297 2.39773 2.93465 3.25549 3.39324 3.43807 3.56982 3.58225 3.78886 3.83629 4.14174 4.19817 4.30049 4.32323 4.37154 4.54657 4.59407 4.68093 4.74183 4.80198 4.88292 4.96067 5.01385 5.05414 5.16080 5.24314 5.34123 5.49775 5.70320 5.94761 6.20466 6.38806 6.43653 6.53897 7.16006 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.069 4.069 3 C -0.052 4.052 4 C 0.589 3.411 5 O -0.521 6.521 6 N -0.732 5.732 7 C 0.129 3.871 8 C -0.119 4.119 9 H 0.099 0.901 10 C -0.168 4.168 11 C 0.077 3.923 12 H 0.071 0.929 13 O -0.552 6.552 14 C -0.124 4.124 15 N -0.535 5.535 16 C 0.014 3.986 17 C -0.037 4.037 18 O -0.531 6.531 19 Si 0.668 3.332 20 C -0.172 4.172 21 H 0.069 0.931 22 H 0.064 0.936 23 H 0.081 0.919 24 H 0.394 0.606 25 H 0.073 0.927 26 H 0.073 0.927 27 H 0.074 0.926 28 H 0.092 0.908 29 H 0.383 0.617 30 H 0.099 0.901 31 H 0.081 0.919 32 H 0.411 0.589 33 H 0.129 0.871 34 H 0.381 0.619 35 H -0.250 1.250 36 H -0.241 1.241 37 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.101 2.595 -3.070 5.742 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.077 4.077 3 C -0.164 4.164 4 C 0.377 3.623 5 O -0.397 6.397 6 N -0.384 5.384 7 C 0.006 3.994 8 C -0.138 4.138 9 H 0.118 0.882 10 C -0.205 4.205 11 C 0.018 3.982 12 H 0.089 0.911 13 O -0.358 6.358 14 C -0.162 4.162 15 N -0.136 5.136 16 C -0.102 4.102 17 C -0.149 4.149 18 O -0.336 6.336 19 Si 0.569 3.431 20 C -0.197 4.197 21 H 0.088 0.912 22 H 0.083 0.917 23 H 0.099 0.901 24 H 0.227 0.773 25 H 0.092 0.908 26 H 0.091 0.909 27 H 0.093 0.907 28 H 0.111 0.889 29 H 0.231 0.769 30 H 0.118 0.882 31 H 0.100 0.900 32 H 0.250 0.750 33 H 0.146 0.854 34 H 0.228 0.772 35 H -0.174 1.174 36 H -0.165 1.165 37 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 3.702 2.532 -1.628 4.771 hybrid contribution 0.864 -0.169 -0.228 0.910 sum 4.566 2.362 -1.856 5.466 Atomic orbital electron populations 1.20387 0.88917 1.03160 1.02524 1.20043 0.96085 0.90531 1.01058 1.20185 0.83309 0.93513 1.19432 1.17024 0.85857 0.82937 0.76482 1.90845 1.15894 1.83149 1.49808 1.45886 1.09241 1.06595 1.76650 1.21448 0.96275 0.78771 1.02898 1.22766 0.97465 0.95190 0.98386 0.88248 1.23760 1.02180 0.97865 0.96735 1.22673 0.84525 0.95457 0.95581 0.91137 1.86467 1.17617 1.94068 1.37620 1.23025 0.98013 0.94497 1.00658 1.41972 1.07063 1.06350 1.58212 1.20848 0.97779 0.82622 1.08992 1.24532 1.00674 0.98663 0.91067 1.86566 1.96509 1.35726 1.14784 0.95608 0.77714 0.83274 0.86540 1.20644 0.90555 0.99122 1.09363 0.91215 0.91723 0.90060 0.77325 0.90826 0.90896 0.90738 0.88931 0.76922 0.88228 0.90034 0.75037 0.85390 0.77182 1.17436 1.16471 0.83572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.22 9.83 36.01 0.35 0.13 16 2 C -0.07 -0.18 6.21 -104.16 -0.65 -0.83 16 3 C -0.05 -0.09 7.06 -81.98 -0.58 -0.67 16 4 C 0.59 1.50 7.79 -12.85 -0.10 1.40 16 5 O -0.52 -3.10 14.80 5.20 0.08 -3.02 16 6 N -0.73 0.51 5.55 -61.62 -0.34 0.17 16 7 C 0.13 -0.11 5.51 -4.04 -0.02 -0.13 16 8 C -0.12 0.26 3.69 -89.81 -0.33 -0.07 16 9 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 10 C -0.17 0.48 7.47 -25.92 -0.19 0.29 16 11 C 0.08 -0.15 5.27 -25.92 -0.14 -0.29 16 12 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 13 O -0.55 0.49 13.59 -35.23 -0.48 0.01 16 14 C -0.12 0.22 7.47 -25.92 -0.19 0.03 16 15 N -0.54 0.59 5.47 -5.69 -0.03 0.56 16 16 C 0.01 0.00 6.10 -81.95 -0.50 -0.50 16 17 C -0.04 0.06 2.98 36.01 0.11 0.16 16 18 O -0.53 0.47 12.88 -35.23 -0.45 0.02 16 19 Si 0.67 -1.99 30.98 -169.99 -5.27 -7.25 16 20 C -0.17 -0.27 10.66 -39.98 -0.43 -0.70 16 21 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 22 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 23 H 0.08 0.32 6.48 -51.93 -0.34 -0.02 16 24 H 0.39 -1.31 7.60 -40.82 -0.31 -1.62 16 25 H 0.07 -0.02 7.84 -51.93 -0.41 -0.43 16 26 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 27 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 28 H 0.09 -0.28 7.89 -51.93 -0.41 -0.69 16 29 H 0.38 -1.85 9.12 45.56 0.42 -1.43 16 30 H 0.10 -0.28 8.10 -51.93 -0.42 -0.70 16 31 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 32 H 0.41 -1.68 6.00 -40.82 -0.24 -1.92 16 33 H 0.13 -0.16 7.96 -51.93 -0.41 -0.57 16 34 H 0.38 -1.77 8.70 45.56 0.40 -1.38 16 35 H -0.25 0.20 7.11 56.52 0.40 0.61 16 36 H -0.24 -0.10 7.11 56.52 0.40 0.30 16 37 H 0.15 0.13 8.06 -52.49 -0.42 -0.29 16 LS Contribution 312.27 15.07 4.71 4.71 Total: 0.00 -8.79 312.27 -8.77 -17.56 By element: Atomic # 1 Polarization: -7.25 SS G_CDS: -4.31 Total: -11.56 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -2.67 Total: -1.19 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -0.37 Total: 0.73 kcal Atomic # 8 Polarization: -2.14 SS G_CDS: -0.86 Total: -2.99 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: -5.27 Total: -7.25 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -8.79 -8.77 -17.56 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_13940406.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.074 kcal (2) G-P(sol) polarization free energy of solvation -8.795 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.869 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.766 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.561 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.635 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds