Wall clock time and date at job start Tue Mar 9 2021 13:04:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86304 * 109.47364 * 2 1 4 4 C 1.50695 * 109.47300 * 240.00073 * 2 1 3 5 5 C 1.34848 * 125.89721 * 119.95643 * 4 2 1 6 6 C 1.40891 * 107.42336 * 179.80681 * 5 4 2 7 7 C 1.34847 * 107.41300 * 0.37645 * 6 5 4 8 8 C 1.50699 * 125.89183 * 179.88428 * 7 6 5 9 9 C 1.50705 * 109.47404 * 274.69479 * 8 7 6 10 10 O 1.21284 * 119.99469 * 359.97438 * 9 8 7 11 11 N 1.34772 * 119.99882 * 179.97438 * 9 8 7 12 12 C 1.46504 * 119.99558 * 180.02562 * 11 9 8 13 13 C 1.53003 * 109.47120 * 180.02562 * 12 11 9 14 14 H 1.08996 * 112.84501 * 316.19454 * 13 12 11 15 15 C 1.53781 * 113.61803 * 87.49985 * 13 12 11 16 16 C 1.53777 * 87.08093 * 139.97894 * 15 13 12 17 17 H 1.08995 * 113.69088 * 220.00167 * 16 15 13 18 18 O 1.42903 * 113.60728 * 89.12047 * 16 15 13 19 19 C 1.53774 * 87.08184 * 334.56999 * 16 15 13 20 20 N 1.36346 * 125.88708 * 299.99815 * 4 2 1 21 21 H 0.96705 * 113.99897 * 300.00503 * 1 2 3 22 22 H 1.09002 * 109.47365 * 119.99743 * 2 1 3 23 23 H 1.48502 * 110.00181 * 178.68203 * 3 2 1 24 24 H 1.48506 * 109.99787 * 300.00216 * 3 2 1 25 25 H 1.08011 * 126.28882 * 0.06105 * 5 4 2 26 26 H 1.07993 * 126.29540 * 180.24550 * 6 5 4 27 27 H 1.09001 * 109.47598 * 154.69302 * 8 7 6 28 28 H 1.09003 * 109.47173 * 34.69642 * 8 7 6 29 29 H 0.96999 * 120.00621 * 0.02562 * 11 9 8 30 30 H 1.08992 * 109.47206 * 60.00007 * 12 11 9 31 31 H 1.09005 * 109.47178 * 299.99907 * 12 11 9 32 32 H 1.09007 * 113.61076 * 25.43551 * 15 13 12 33 33 H 1.08997 * 113.61328 * 254.53799 * 15 13 12 34 34 H 0.96700 * 114.00311 * 82.50322 * 18 16 15 35 35 H 1.09002 * 113.61399 * 139.97742 * 19 16 15 36 36 H 1.08996 * 113.61533 * 270.87519 * 19 16 15 37 37 H 0.96997 * 125.63649 * 359.97438 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7092 -0.1725 -2.1917 6 6 2.9482 -1.1759 -3.1515 7 6 2.3004 -2.2863 -2.7444 8 6 2.2749 -3.6089 -3.4661 9 6 1.1815 -3.5945 -4.5031 10 8 0.4905 -2.6074 -4.6420 11 7 0.9714 -4.6784 -5.2760 12 6 -0.0912 -4.6641 -6.2844 13 6 -0.1171 -6.0070 -7.0171 14 1 0.8781 -6.3634 -7.2829 15 6 -0.9897 -7.0687 -6.3269 16 6 -1.4562 -7.4852 -7.7318 17 1 -2.5185 -7.7224 -7.7881 18 8 -0.6318 -8.4841 -8.3358 19 6 -1.1197 -6.0539 -8.1822 20 7 1.6771 -2.0077 -1.5641 21 1 -0.3933 0.4418 0.7650 22 1 1.7924 -0.5138 0.8900 23 1 3.5347 1.7703 0.0321 24 1 1.5615 2.4679 -1.2085 25 1 3.0839 0.8402 -2.2187 26 1 3.5395 -1.0738 -4.0493 27 1 2.0867 -4.4097 -2.7509 28 1 3.2356 -3.7755 -3.9534 29 1 1.5238 -5.4680 -5.1647 30 1 0.0972 -3.8633 -6.9994 31 1 -1.0521 -4.4977 -5.7974 32 1 -1.7838 -6.6475 -5.7102 33 1 -0.4151 -7.8382 -5.8115 34 1 -0.8387 -9.3864 -8.0564 35 1 -0.6501 -6.0043 -9.1646 36 1 -1.9493 -5.3554 -8.0728 37 1 1.1412 -2.6295 -1.0474 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12857620_14644196.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:25 Heat of formation + Delta-G solvation = -45.040794 kcal Electronic energy + Delta-G solvation = -19785.198872 eV Core-core repulsion = 16530.708983 eV Total energy + Delta-G solvation = -3254.489890 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -42.24617 -40.91727 -39.98811 -37.63828 -36.50533 -34.87627 -33.19427 -31.85183 -30.00408 -28.34688 -26.84756 -25.03906 -23.55573 -21.86851 -21.25576 -21.06167 -20.54825 -18.55479 -18.40716 -18.03122 -17.82807 -16.93188 -16.65566 -16.19582 -15.77366 -15.67850 -15.05006 -14.94911 -14.72521 -14.54670 -14.33419 -13.96795 -13.86310 -13.52155 -13.40239 -13.24699 -12.94874 -12.80819 -12.43134 -12.20422 -11.96854 -11.86635 -11.30079 -10.94787 -10.69971 -10.41632 -10.04925 -9.69523 -8.85311 -4.94208 1.12526 1.33298 1.69784 1.75478 1.95027 2.12121 2.31565 2.51542 2.96674 3.43911 3.44167 3.48703 3.61963 3.67775 3.83705 3.97610 4.00527 4.04067 4.22029 4.31292 4.37209 4.37837 4.57507 4.58342 4.63658 4.71827 4.79564 4.84316 4.92643 5.05908 5.23081 5.31515 5.37344 5.45833 6.07962 6.21297 6.47046 6.56968 6.58710 6.70660 7.27478 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.053 4.053 3 Si 0.715 3.285 4 C 0.036 3.964 5 C -0.195 4.195 6 C -0.171 4.171 7 C 0.037 3.963 8 C -0.071 4.071 9 C 0.508 3.492 10 O -0.522 6.522 11 N -0.732 5.732 12 C 0.128 3.872 13 C -0.117 4.117 14 H 0.101 0.899 15 C -0.168 4.168 16 C 0.077 3.923 17 H 0.070 0.930 18 O -0.552 6.552 19 C -0.125 4.125 20 N -0.533 5.533 21 H 0.383 0.617 22 H 0.070 0.930 23 H -0.254 1.254 24 H -0.250 1.250 25 H 0.133 0.867 26 H 0.137 0.863 27 H 0.100 0.900 28 H 0.117 0.883 29 H 0.401 0.599 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.090 0.910 33 H 0.074 0.926 34 H 0.383 0.617 35 H 0.081 0.919 36 H 0.098 0.902 37 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.099 -4.128 3.961 5.722 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.163 4.163 3 Si 0.614 3.386 4 C -0.078 4.078 5 C -0.220 4.220 6 C -0.196 4.196 7 C -0.076 4.076 8 C -0.111 4.111 9 C 0.294 3.706 10 O -0.397 6.397 11 N -0.385 5.385 12 C 0.005 3.995 13 C -0.136 4.136 14 H 0.119 0.881 15 C -0.205 4.205 16 C 0.018 3.982 17 H 0.088 0.912 18 O -0.358 6.358 19 C -0.163 4.163 20 N -0.127 5.127 21 H 0.231 0.769 22 H 0.088 0.912 23 H -0.179 1.179 24 H -0.174 1.174 25 H 0.151 0.849 26 H 0.155 0.845 27 H 0.118 0.882 28 H 0.136 0.864 29 H 0.235 0.765 30 H 0.088 0.912 31 H 0.087 0.913 32 H 0.109 0.891 33 H 0.092 0.908 34 H 0.231 0.769 35 H 0.100 0.900 36 H 0.117 0.883 37 H 0.250 0.750 Dipole moment (debyes) X Y Z Total from point charges 0.133 -2.690 2.668 3.791 hybrid contribution -0.197 -1.842 0.339 1.884 sum -0.064 -4.533 3.006 5.440 Atomic orbital electron populations 1.86519 1.17452 1.81872 1.49795 1.24440 0.85490 1.10954 0.95394 0.95442 0.80439 0.75868 0.86857 1.19660 1.04541 0.84869 0.98687 1.20508 1.05904 0.99466 0.96123 1.20541 1.05862 0.92227 1.00971 1.19452 1.02276 0.96572 0.89340 1.20126 0.99814 0.94517 0.96685 1.20599 0.85099 0.82870 0.82063 1.90789 1.47696 1.32610 1.68582 1.45988 1.37098 1.17195 1.38190 1.21404 0.90813 0.97190 0.90142 1.22745 0.99781 0.94323 0.96714 0.88129 1.23749 1.00205 0.99266 0.97306 1.22675 0.93523 0.89311 0.92723 0.91191 1.86465 1.60804 1.18628 1.69858 1.23027 0.99411 0.94793 0.99054 1.41747 1.40836 1.10960 1.19196 0.76902 0.91188 1.17880 1.17387 0.84904 0.84469 0.88194 0.86450 0.76505 0.91182 0.91325 0.89121 0.90753 0.76937 0.90029 0.88340 0.75025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.77 12.86 -35.23 -0.45 -1.23 16 2 C -0.05 -0.06 3.07 36.00 0.11 0.05 16 3 Si 0.71 -0.08 30.58 -169.99 -5.20 -5.28 16 4 C 0.04 0.15 6.54 -81.79 -0.53 -0.38 16 5 C -0.20 -1.03 9.37 -39.78 -0.37 -1.41 16 6 C -0.17 -0.81 10.77 -39.78 -0.43 -1.24 16 7 C 0.04 0.12 5.66 -81.79 -0.46 -0.34 16 8 C -0.07 0.03 6.24 -29.03 -0.18 -0.16 16 9 C 0.51 1.18 7.82 -10.99 -0.09 1.09 16 10 O -0.52 -3.92 16.03 5.55 0.09 -3.83 16 11 N -0.73 0.37 5.56 -60.29 -0.33 0.04 16 12 C 0.13 0.01 5.51 -4.04 -0.02 -0.01 16 13 C -0.12 0.15 3.69 -89.81 -0.33 -0.18 16 14 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 15 C -0.17 0.33 7.46 -25.92 -0.19 0.13 16 16 C 0.08 -0.09 5.28 -25.92 -0.14 -0.23 16 17 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 18 O -0.55 0.08 13.59 -35.23 -0.48 -0.39 16 19 C -0.13 0.12 7.47 -25.93 -0.19 -0.08 16 20 N -0.53 -1.72 6.08 -5.44 -0.03 -1.75 16 21 H 0.38 -1.54 8.74 45.56 0.40 -1.14 16 22 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 23 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 24 H -0.25 -0.93 7.11 56.52 0.40 -0.53 16 25 H 0.13 0.61 6.22 -52.48 -0.33 0.28 16 26 H 0.14 0.45 8.06 -52.49 -0.42 0.02 16 27 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 28 H 0.12 -0.31 8.14 -51.93 -0.42 -0.73 16 29 H 0.40 -1.34 8.47 -40.82 -0.35 -1.68 16 30 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 31 H 0.07 0.07 7.84 -51.93 -0.41 -0.34 16 32 H 0.09 -0.19 7.90 -51.92 -0.41 -0.60 16 33 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 34 H 0.38 -1.58 9.12 45.56 0.42 -1.17 16 35 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 37 H 0.41 0.42 8.96 -40.82 -0.37 0.05 16 LS Contribution 316.15 15.07 4.76 4.76 Total: 0.00 -11.72 316.15 -8.93 -20.65 By element: Atomic # 1 Polarization: -5.77 SS G_CDS: -4.45 Total: -10.23 kcal Atomic # 6 Polarization: 0.09 SS G_CDS: -2.83 Total: -2.74 kcal Atomic # 7 Polarization: -1.35 SS G_CDS: -0.37 Total: -1.72 kcal Atomic # 8 Polarization: -4.61 SS G_CDS: -0.84 Total: -5.45 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: -5.20 Total: -5.28 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -11.72 -8.93 -20.65 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_14644196.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.387 kcal (2) G-P(sol) polarization free energy of solvation -11.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.654 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds