Wall clock time and date at job start Tue Mar 9 2021 13:04:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.47113 * 2 1 4 4 C 1.50705 * 109.47324 * 239.99964 * 2 1 3 5 5 C 1.38263 * 119.94288 * 300.00439 * 4 2 1 6 6 C 1.38140 * 120.05501 * 180.02562 * 5 4 2 7 7 C 1.38729 * 119.94655 * 359.97438 * 6 5 4 8 8 O 1.35904 * 120.06055 * 180.02562 * 7 6 5 9 9 C 1.42897 * 117.00158 * 180.02562 * 8 7 6 10 10 C 1.50698 * 109.47008 * 180.02562 * 9 8 7 11 11 O 1.21281 * 120.00164 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99720 * 179.97438 * 10 9 8 13 13 C 1.46508 * 120.00013 * 180.02562 * 12 10 9 14 14 C 1.52991 * 109.47429 * 180.02562 * 13 12 10 15 15 H 1.09003 * 112.84801 * 316.19512 * 14 13 12 16 16 C 1.53781 * 113.61611 * 87.50116 * 14 13 12 17 17 C 1.54049 * 87.08031 * 139.97702 * 16 14 13 18 18 H 1.08992 * 113.69868 * 220.05225 * 17 16 14 19 19 O 1.42907 * 113.61025 * 89.07067 * 17 16 14 20 20 C 1.53781 * 113.61529 * 184.99923 * 14 13 12 21 21 C 1.38738 * 119.88680 * 0.27548 * 7 6 5 22 22 C 1.38148 * 119.94208 * 359.47626 * 21 7 6 23 23 H 0.96698 * 114.00572 * 300.00237 * 1 2 3 24 24 H 1.09000 * 109.47437 * 120.00002 * 2 1 3 25 25 H 1.48501 * 109.99940 * 299.99847 * 3 2 1 26 26 H 1.48501 * 110.00053 * 61.31746 * 3 2 1 27 27 H 1.08003 * 119.97263 * 359.96820 * 5 4 2 28 28 H 1.08001 * 120.03083 * 180.02562 * 6 5 4 29 29 H 1.08993 * 109.47232 * 60.00091 * 9 8 7 30 30 H 1.09005 * 109.46922 * 300.00168 * 9 8 7 31 31 H 0.96996 * 120.00851 * 359.97438 * 12 10 9 32 32 H 1.08997 * 109.46666 * 59.99730 * 13 12 10 33 33 H 1.09002 * 109.46731 * 300.00370 * 13 12 10 34 34 H 1.09005 * 113.61471 * 254.53285 * 16 14 13 35 35 H 1.08996 * 113.61178 * 25.34627 * 16 14 13 36 36 H 0.96698 * 113.99817 * 82.62157 * 19 17 16 37 37 H 1.09002 * 113.61445 * 334.56787 * 20 14 13 38 38 H 1.09002 * 113.61408 * 105.38518 * 20 14 13 39 39 H 1.07999 * 120.02705 * 179.71962 * 21 7 6 40 40 H 1.07996 * 119.97056 * 180.22267 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5966 -2.0341 -1.4482 6 6 2.0562 -2.6877 -2.5750 7 6 2.8540 -2.0147 -3.4889 8 8 3.3071 -2.6553 -4.5986 9 6 4.1241 -1.9003 -5.4954 10 6 4.5284 -2.7689 -6.6586 11 8 4.1542 -3.9213 -6.7139 12 7 5.3059 -2.2652 -7.6375 13 6 5.6986 -3.1094 -8.7687 14 6 6.5734 -2.3012 -9.7289 15 1 6.1884 -1.2975 -9.9092 16 6 8.0697 -2.3347 -9.3754 17 6 8.3438 -2.4437 -10.8874 18 1 9.1487 -3.1345 -11.1380 19 8 8.4741 -1.1781 -11.5382 20 6 6.9407 -3.0603 -11.0148 21 6 3.1928 -0.6880 -3.2656 22 6 2.7263 -0.0374 -2.1397 23 1 -0.3934 0.4417 0.7650 24 1 1.7923 -0.5138 0.8900 25 1 1.5615 2.4679 -1.2085 26 1 1.5878 2.4586 1.2242 27 1 0.9759 -2.5578 -0.7361 28 1 1.7942 -3.7216 -2.7448 29 1 5.0156 -1.5555 -4.9719 30 1 3.5628 -1.0408 -5.8621 31 1 5.6049 -1.3435 -7.5936 32 1 4.8065 -3.4539 -9.2918 33 1 6.2598 -3.9692 -8.4027 34 1 8.4343 -1.4084 -8.9311 35 1 8.3654 -3.2195 -8.8118 36 1 9.3543 -0.7853 -11.4616 37 1 6.9281 -4.1442 -10.9007 38 1 6.3927 -2.7208 -11.8938 39 1 3.8174 -0.1632 -3.9733 40 1 2.9868 0.9964 -1.9673 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12857620_2989410.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:38 Heat of formation + Delta-G solvation = -92.118731 kcal Electronic energy + Delta-G solvation = -22452.341347 eV Core-core repulsion = 18814.327583 eV Total energy + Delta-G solvation = -3638.013764 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.51994 -40.87592 -40.11215 -38.87760 -37.30142 -36.53470 -34.98727 -32.45416 -31.80144 -30.51282 -28.15429 -26.86499 -26.13653 -24.14588 -23.49238 -22.22884 -21.69582 -20.65312 -19.45038 -18.68855 -18.49139 -17.92480 -17.49560 -17.27066 -16.80216 -16.71754 -16.44892 -15.93590 -15.72025 -15.53619 -15.33387 -14.91167 -14.46167 -14.41791 -14.08028 -14.00580 -13.88197 -13.53668 -13.50122 -13.38408 -13.03106 -12.46970 -12.29215 -12.15336 -12.00330 -11.89265 -11.71144 -11.33066 -10.98755 -10.73879 -10.49608 -10.18183 -9.99087 -9.16258 -4.99315 0.32917 0.35112 1.27264 1.46207 1.50570 1.57321 1.93898 2.56400 2.65927 2.94833 3.32994 3.36672 3.44984 3.52770 3.61596 3.74979 3.80205 3.82596 3.86914 3.90254 3.95150 4.16093 4.28748 4.33467 4.38861 4.49642 4.55374 4.59494 4.67756 4.69622 4.73837 4.89500 4.99166 5.01984 5.16662 5.19876 5.28955 5.34263 5.55718 5.71288 6.24252 6.38597 6.44423 6.55416 7.09728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.679 3.321 4 C -0.111 4.111 5 C -0.050 4.050 6 C -0.146 4.146 7 C 0.133 3.867 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.514 3.486 11 O -0.513 6.513 12 N -0.726 5.726 13 C 0.129 3.871 14 C -0.118 4.118 15 H 0.101 0.899 16 C -0.168 4.168 17 C 0.077 3.923 18 H 0.071 0.929 19 O -0.552 6.552 20 C -0.125 4.125 21 C -0.206 4.206 22 C -0.073 4.073 23 H 0.379 0.621 24 H 0.076 0.924 25 H -0.256 1.256 26 H -0.262 1.262 27 H 0.133 0.867 28 H 0.136 0.864 29 H 0.096 0.904 30 H 0.095 0.905 31 H 0.403 0.597 32 H 0.072 0.928 33 H 0.072 0.928 34 H 0.074 0.926 35 H 0.091 0.909 36 H 0.383 0.617 37 H 0.099 0.901 38 H 0.081 0.919 39 H 0.133 0.867 40 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.048 3.708 0.636 7.122 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.581 3.419 4 C -0.111 4.111 5 C -0.068 4.068 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.299 3.701 11 O -0.387 6.387 12 N -0.380 5.380 13 C 0.006 3.994 14 C -0.137 4.137 15 H 0.119 0.881 16 C -0.205 4.205 17 C 0.017 3.983 18 H 0.089 0.911 19 O -0.358 6.358 20 C -0.162 4.162 21 C -0.224 4.224 22 C -0.091 4.091 23 H 0.227 0.773 24 H 0.094 0.906 25 H -0.180 1.180 26 H -0.187 1.187 27 H 0.151 0.849 28 H 0.154 0.846 29 H 0.114 0.886 30 H 0.113 0.887 31 H 0.237 0.763 32 H 0.091 0.909 33 H 0.091 0.909 34 H 0.093 0.907 35 H 0.110 0.890 36 H 0.231 0.769 37 H 0.117 0.883 38 H 0.100 0.900 39 H 0.150 0.850 40 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 4.988 3.051 -0.172 5.850 hybrid contribution -0.299 0.690 0.684 1.016 sum 4.690 3.741 0.512 6.021 Atomic orbital electron populations 1.86593 1.17932 1.80102 1.49749 1.24734 0.84349 1.10747 0.98261 0.95200 0.91686 0.74774 0.80284 1.19166 1.00780 0.94636 0.96526 1.20827 0.96463 0.93532 0.95967 1.20512 1.00462 1.01300 0.94137 1.19064 0.94360 0.91085 0.86686 1.86171 1.64274 1.38600 1.31003 1.22470 0.96406 0.94546 0.90460 1.20042 0.78836 0.88095 0.83153 1.90790 1.53136 1.17652 1.77145 1.45806 1.52785 1.16223 1.23218 1.21458 0.98899 0.93267 0.85764 1.22751 0.94862 1.00381 0.95662 0.88064 1.23804 0.96048 1.03189 0.97503 1.22723 0.97962 0.85820 0.91757 0.91109 1.86465 1.37508 1.34769 1.77019 1.23028 0.95257 1.00130 0.97832 1.21141 1.06336 0.94220 1.00742 1.20711 0.96453 0.98998 0.92916 0.77292 0.90613 1.18017 1.18685 0.84888 0.84598 0.88633 0.88739 0.76304 0.90925 0.90929 0.90703 0.89003 0.76903 0.88275 0.90014 0.84961 0.85246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.75 12.74 -35.23 -0.45 -1.20 16 2 C -0.07 -0.01 2.81 36.01 0.10 0.10 16 3 Si 0.68 -0.64 29.78 -169.99 -5.06 -5.71 16 4 C -0.11 -0.16 5.42 -104.60 -0.57 -0.73 16 5 C -0.05 -0.10 9.60 -39.61 -0.38 -0.48 16 6 C -0.15 -0.36 9.99 -39.44 -0.39 -0.76 16 7 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 8 O -0.29 -0.95 9.67 -39.35 -0.38 -1.33 16 9 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 10 C 0.51 0.87 7.91 -10.99 -0.09 0.79 16 11 O -0.51 -3.51 16.50 -14.35 -0.24 -3.74 16 12 N -0.73 1.06 5.56 -60.29 -0.33 0.73 16 13 C 0.13 -0.12 5.51 -4.04 -0.02 -0.15 16 14 C -0.12 0.26 3.69 -89.81 -0.33 -0.07 16 15 H 0.10 -0.19 8.14 -51.93 -0.42 -0.62 16 16 C -0.17 0.46 7.47 -25.78 -0.19 0.27 16 17 C 0.08 -0.14 5.29 -25.77 -0.14 -0.28 16 18 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 19 O -0.55 0.40 13.59 -35.23 -0.48 -0.08 16 20 C -0.12 0.21 7.46 -25.92 -0.19 0.02 16 21 C -0.21 -0.07 9.04 -39.43 -0.36 -0.43 16 22 C -0.07 -0.03 8.66 -39.60 -0.34 -0.38 16 23 H 0.38 -0.98 8.74 45.56 0.40 -0.58 16 24 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 25 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 26 H -0.26 -0.30 7.11 56.52 0.40 0.11 16 27 H 0.13 0.11 8.06 -52.48 -0.42 -0.31 16 28 H 0.14 0.25 8.06 -52.49 -0.42 -0.17 16 29 H 0.10 -0.33 7.65 -51.93 -0.40 -0.73 16 30 H 0.09 -0.28 7.67 -51.93 -0.40 -0.68 16 31 H 0.40 -1.81 8.47 -40.82 -0.35 -2.15 16 32 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.07 -0.02 7.84 -51.93 -0.41 -0.42 16 34 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 35 H 0.09 -0.27 7.89 -51.93 -0.41 -0.68 16 36 H 0.38 -1.78 9.12 45.56 0.42 -1.37 16 37 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 38 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.13 -0.35 6.30 -52.49 -0.33 -0.68 16 40 H 0.13 -0.22 4.87 -52.49 -0.26 -0.47 16 LS Contribution 338.28 15.07 5.10 5.10 Total: 0.00 -10.84 338.28 -9.54 -20.38 By element: Atomic # 1 Polarization: -7.55 SS G_CDS: -4.72 Total: -12.27 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -2.98 Total: -1.88 kcal Atomic # 7 Polarization: 1.06 SS G_CDS: -0.33 Total: 0.73 kcal Atomic # 8 Polarization: -4.81 SS G_CDS: -1.55 Total: -6.35 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.06 Total: -5.71 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -10.84 -9.54 -20.38 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_2989410.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.737 kcal (2) G-P(sol) polarization free energy of solvation -10.837 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.574 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.545 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.382 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds