Wall clock time and date at job start Tue Mar 9 2021 13:04:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86299 * 109.46895 * 2 1 4 4 C 1.50694 * 109.47316 * 120.00274 * 2 1 3 5 5 C 1.38266 * 119.94750 * 65.00156 * 4 2 1 6 6 C 1.38137 * 120.05580 * 179.97438 * 5 4 2 7 7 C 1.38732 * 119.94823 * 0.02562 * 6 5 4 8 8 O 1.35899 * 120.05617 * 180.02562 * 7 6 5 9 9 C 1.42900 * 117.00084 * 179.97438 * 8 7 6 10 10 C 1.50693 * 109.47588 * 179.97438 * 9 8 7 11 11 C 1.36416 * 125.80203 * 89.99457 * 10 9 8 12 12 C 1.47386 * 127.19017 * 0.02861 * 11 10 9 13 13 O 1.21610 * 119.99793 * 359.97438 * 12 11 10 14 14 N 1.34777 * 119.99950 * 179.97438 * 12 11 10 15 15 C 1.46496 * 120.00258 * 179.97438 * 14 12 11 16 16 C 1.52993 * 109.47551 * 180.02562 * 15 14 12 17 17 H 1.09003 * 112.84518 * 43.80465 * 16 15 14 18 18 C 1.53777 * 113.61900 * 174.99875 * 16 15 14 19 19 C 1.53777 * 87.08320 * 139.98313 * 18 16 15 20 20 H 1.09002 * 113.61794 * 219.93697 * 19 18 16 21 21 O 1.42903 * 113.61575 * 89.11892 * 19 18 16 22 22 C 1.53780 * 87.08325 * 334.56997 * 19 18 16 23 23 C 1.47018 * 105.61684 * 180.28399 * 11 10 9 24 24 C 1.34177 * 105.95616 * 359.57657 * 23 11 10 25 25 O 1.33647 * 125.80296 * 270.02843 * 10 9 8 26 26 C 1.38732 * 119.88381 * 0.27292 * 7 6 5 27 27 C 1.38140 * 119.94471 * 359.47238 * 26 7 6 28 28 H 0.96699 * 113.99445 * 299.99481 * 1 2 3 29 29 H 1.09003 * 109.46935 * 240.00878 * 2 1 3 30 30 H 1.48499 * 109.99994 * 178.68412 * 3 2 1 31 31 H 1.48499 * 110.00093 * 300.00402 * 3 2 1 32 32 H 1.08004 * 119.96851 * 359.97438 * 5 4 2 33 33 H 1.08005 * 120.02833 * 179.97438 * 6 5 4 34 34 H 1.09001 * 109.46934 * 59.99670 * 9 8 7 35 35 H 1.09005 * 109.46718 * 299.99986 * 9 8 7 36 36 H 0.96999 * 120.00047 * 0.02562 * 14 12 11 37 37 H 1.09000 * 109.47024 * 300.00478 * 15 14 12 38 38 H 1.09004 * 109.46875 * 60.00324 * 15 14 12 39 39 H 1.08993 * 113.61849 * 254.53713 * 18 16 15 40 40 H 1.09004 * 113.60962 * 25.35215 * 18 16 15 41 41 H 0.96692 * 114.00106 * 179.97438 * 21 19 18 42 42 H 1.08997 * 113.61858 * 270.88704 * 22 19 18 43 43 H 1.09000 * 113.61604 * 139.97649 * 22 19 18 44 44 H 1.08002 * 127.02192 * 179.71337 * 23 11 10 45 45 H 1.07997 * 125.43847 * 180.10388 * 24 23 11 46 46 H 1.08004 * 120.02689 * 179.72665 * 26 7 6 47 47 H 1.08005 * 119.96953 * 180.23184 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6842 -2.0605 1.3971 6 6 2.1441 -2.7141 2.5238 7 6 2.8541 -2.0147 3.4889 8 8 3.3081 -2.6556 4.5979 9 6 4.0321 -1.8725 5.5491 10 6 4.4519 -2.7457 6.7032 11 6 5.6194 -3.4460 6.7907 12 6 6.7035 -3.4987 5.7936 13 8 6.6069 -2.8707 4.7566 14 7 7.8018 -4.2428 6.0310 15 6 8.8791 -4.2957 5.0397 16 6 9.9989 -5.2041 5.5512 17 1 9.6255 -6.1265 5.9962 18 6 11.1274 -5.4255 4.5304 19 6 12.1088 -5.3143 5.7091 20 1 13.0151 -4.7573 5.4718 21 8 12.3769 -6.5629 6.3505 22 6 11.0357 -4.4739 6.4212 23 6 5.5674 -4.1420 8.0846 24 6 4.3994 -3.7923 8.6449 25 8 3.7435 -2.9663 7.8148 26 6 3.0955 -0.6587 3.3221 27 6 2.6380 -0.0108 2.1911 28 1 -0.3932 0.4416 0.7651 29 1 1.7923 -0.5137 -0.8901 30 1 3.5345 1.7704 0.0320 31 1 1.5614 2.4679 -1.2084 32 1 1.1310 -2.6046 0.6458 33 1 1.9504 -3.7687 2.6539 34 1 3.3959 -1.0670 5.9160 35 1 4.9164 -1.4489 5.0730 36 1 7.8787 -4.7440 6.8579 37 1 8.4905 -4.6917 4.1015 38 1 9.2715 -3.2920 4.8757 39 1 11.1105 -6.4123 4.0679 40 1 11.2230 -4.6189 3.8035 41 1 12.9937 -6.4994 7.0924 42 1 11.1069 -3.4066 6.2121 43 1 10.9446 -4.6927 7.4851 44 1 6.3173 -4.7988 8.5003 45 1 4.0417 -4.1267 9.6075 46 1 3.6442 -0.1110 4.0741 47 1 2.8290 1.0440 2.0591 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12857620_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:55 Heat of formation + Delta-G solvation = -78.588915 kcal Electronic energy + Delta-G solvation = -31121.174474 eV Core-core repulsion = 26624.849174 eV Total energy + Delta-G solvation = -4496.325299 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.73278 -41.31852 -40.95663 -40.05281 -39.23351 -37.19284 -36.54731 -35.05545 -34.04074 -32.86007 -32.00472 -31.40399 -29.37741 -27.69413 -26.72629 -26.17920 -24.77703 -23.83165 -23.39145 -22.41719 -22.04430 -21.25235 -20.45214 -19.52232 -19.22499 -18.28528 -18.02146 -17.42637 -17.27032 -17.19648 -16.95698 -16.72537 -16.52676 -16.43167 -16.00147 -15.93971 -15.76118 -15.50973 -15.30877 -14.73992 -14.63278 -14.40401 -14.37155 -14.21625 -13.98596 -13.77172 -13.70785 -13.49768 -13.38573 -13.12955 -12.96889 -12.29051 -12.19946 -12.09049 -12.07729 -11.87683 -11.78574 -11.25272 -11.18568 -10.99355 -10.66579 -10.41813 -10.22208 -10.07940 -9.84394 -9.26546 -5.01148 -0.06000 0.24692 0.27121 1.01551 1.32219 1.50033 1.64058 1.96163 2.02878 2.10614 2.45236 2.62387 3.14357 3.32994 3.47998 3.55162 3.57916 3.62466 3.67928 3.70355 3.75495 3.79023 3.89722 3.92792 3.94737 4.09661 4.23388 4.27246 4.39992 4.44418 4.45874 4.48132 4.57656 4.63366 4.64298 4.74434 4.78809 4.80936 4.85008 4.93298 5.02560 5.11871 5.13288 5.22776 5.23755 5.27919 5.42388 5.45369 5.66481 5.86734 6.23858 6.39904 6.78996 6.85823 7.05997 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.069 4.069 3 Si 0.776 3.224 4 C -0.161 4.161 5 C -0.059 4.059 6 C -0.164 4.164 7 C 0.124 3.876 8 O -0.323 6.323 9 C 0.135 3.865 10 C 0.041 3.959 11 C -0.225 4.225 12 C 0.581 3.419 13 O -0.574 6.574 14 N -0.706 5.706 15 C 0.132 3.868 16 C -0.110 4.110 17 H 0.098 0.902 18 C -0.131 4.131 19 C 0.075 3.925 20 H 0.081 0.919 21 O -0.572 6.572 22 C -0.158 4.158 23 C -0.199 4.199 24 C -0.010 4.010 25 O -0.176 6.176 26 C -0.205 4.205 27 C -0.074 4.074 28 H 0.395 0.605 29 H 0.105 0.895 30 H -0.288 1.288 31 H -0.298 1.298 32 H 0.138 0.862 33 H 0.132 0.868 34 H 0.104 0.896 35 H 0.106 0.894 36 H 0.414 0.586 37 H 0.056 0.944 38 H 0.068 0.932 39 H 0.069 0.931 40 H 0.107 0.893 41 H 0.398 0.602 42 H 0.096 0.904 43 H 0.080 0.920 44 H 0.190 0.810 45 H 0.253 0.747 46 H 0.150 0.850 47 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.995 1.184 8.299 8.902 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.179 4.179 3 Si 0.683 3.317 4 C -0.162 4.162 5 C -0.077 4.077 6 C -0.182 4.182 7 C 0.079 3.921 8 O -0.238 6.238 9 C 0.061 3.939 10 C -0.012 4.012 11 C -0.230 4.230 12 C 0.369 3.631 13 O -0.455 6.455 14 N -0.357 5.357 15 C 0.009 3.991 16 C -0.129 4.129 17 H 0.116 0.884 18 C -0.169 4.169 19 C 0.016 3.984 20 H 0.099 0.901 21 O -0.381 6.381 22 C -0.196 4.196 23 C -0.217 4.217 24 C -0.076 4.076 25 O -0.071 6.071 26 C -0.223 4.223 27 C -0.091 4.091 28 H 0.245 0.755 29 H 0.122 0.878 30 H -0.216 1.216 31 H -0.226 1.226 32 H 0.156 0.844 33 H 0.150 0.850 34 H 0.122 0.878 35 H 0.124 0.876 36 H 0.251 0.749 37 H 0.075 0.925 38 H 0.087 0.913 39 H 0.087 0.913 40 H 0.125 0.875 41 H 0.249 0.751 42 H 0.114 0.886 43 H 0.099 0.901 44 H 0.207 0.793 45 H 0.269 0.731 46 H 0.167 0.833 47 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 2.818 1.591 6.282 7.066 hybrid contribution 0.773 -0.894 0.492 1.280 sum 3.591 0.697 6.774 7.698 Atomic orbital electron populations 1.86462 1.17270 1.82216 1.50461 1.25118 0.85231 1.10743 0.96812 0.93801 0.77718 0.75376 0.84825 1.20357 1.02668 0.95042 0.98126 1.20945 0.96689 0.94003 0.96053 1.20622 1.02317 1.01058 0.94242 1.19184 0.94449 0.91794 0.86677 1.86048 1.68972 1.39024 1.29754 1.21155 0.98193 0.90783 0.83815 1.22052 0.90647 1.00277 0.88186 1.21383 0.97279 1.05531 0.98809 1.17480 0.81786 0.78872 0.84967 1.90773 1.80527 1.46129 1.28109 1.45673 1.17957 1.48881 1.23237 1.21417 0.86475 1.00043 0.91209 1.22664 0.93010 0.98815 0.98405 0.88390 1.23102 0.94139 1.03321 0.96324 1.22720 0.96743 0.85008 0.93916 0.90075 1.86421 1.69389 1.30710 1.51582 1.23700 0.95790 0.99913 1.00183 1.23242 1.00906 1.04470 0.93105 1.24917 0.92619 0.92791 0.97240 1.83795 1.44454 1.53778 1.25094 1.21432 1.06171 0.93268 1.01455 1.21018 0.95646 1.00074 0.92377 0.75500 0.87789 1.21550 1.22595 0.84396 0.85018 0.87759 0.87592 0.74887 0.92540 0.91334 0.91252 0.87476 0.75141 0.88554 0.90094 0.79277 0.73086 0.83271 0.83014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.09 12.83 -148.98 -1.91 -3.00 16 2 C -0.07 -0.11 2.80 71.23 0.20 0.09 16 3 Si 0.78 -0.47 29.80 68.60 2.04 1.57 16 4 C -0.16 -0.52 5.35 -19.85 -0.11 -0.62 16 5 C -0.06 -0.30 9.68 22.25 0.22 -0.09 16 6 C -0.16 -1.21 9.99 22.36 0.22 -0.98 16 7 C 0.12 0.99 6.69 22.51 0.15 1.14 16 8 O -0.32 -3.19 10.12 -92.41 -0.94 -4.13 16 9 C 0.13 0.70 4.74 71.23 0.34 1.04 16 10 C 0.04 0.23 7.00 25.26 0.18 0.41 16 11 C -0.23 -1.02 6.31 -18.99 -0.12 -1.14 16 12 C 0.58 4.29 7.81 86.65 0.68 4.96 16 13 O -0.57 -8.31 14.85 -4.06 -0.06 -8.37 16 14 N -0.71 -0.62 5.55 -466.43 -2.59 -3.20 16 15 C 0.13 0.09 5.51 86.38 0.48 0.56 16 16 C -0.11 0.30 3.69 -10.27 -0.04 0.26 16 17 H 0.10 -0.19 8.14 -2.39 -0.02 -0.21 16 18 C -0.13 0.26 7.47 31.12 0.23 0.50 16 19 C 0.08 -0.25 5.28 31.12 0.16 -0.08 16 20 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 21 O -0.57 0.59 13.59 -148.98 -2.02 -1.43 16 22 C -0.16 0.79 7.46 31.12 0.23 1.02 16 23 C -0.20 0.59 10.60 23.65 0.25 0.84 16 24 C -0.01 0.04 12.03 66.89 0.80 0.85 16 25 O -0.18 -0.48 10.52 4.44 0.05 -0.43 16 26 C -0.20 -0.77 9.04 22.36 0.20 -0.57 16 27 C -0.07 -0.12 8.66 22.25 0.19 0.07 16 28 H 0.40 -2.45 8.70 -74.06 -0.64 -3.10 16 29 H 0.10 0.31 7.96 -2.39 -0.02 0.29 16 30 H -0.29 -1.32 7.11 99.48 0.71 -0.61 16 31 H -0.30 -1.96 7.11 99.48 0.71 -1.26 16 32 H 0.14 0.45 8.06 -2.91 -0.02 0.43 16 33 H 0.13 0.83 8.06 -2.91 -0.02 0.81 16 34 H 0.10 -0.03 7.65 -2.39 -0.02 -0.05 16 35 H 0.11 0.69 6.02 -2.38 -0.01 0.67 16 36 H 0.41 -1.94 7.64 -92.71 -0.71 -2.65 16 37 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 38 H 0.07 0.11 7.85 -2.38 -0.02 0.09 16 39 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 40 H 0.11 -0.43 8.10 -2.38 -0.02 -0.45 16 41 H 0.40 -3.65 9.12 -74.06 -0.68 -4.33 16 42 H 0.10 -0.54 7.90 -2.39 -0.02 -0.56 16 43 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 44 H 0.19 -1.87 7.74 -2.91 -0.02 -1.89 16 45 H 0.25 -3.37 8.06 -2.91 -0.02 -3.40 16 46 H 0.15 -0.09 6.30 -2.91 -0.02 -0.10 16 47 H 0.15 -0.58 4.90 -2.91 -0.01 -0.59 16 Total: 0.00 -26.28 396.34 -2.10 -28.38 By element: Atomic # 1 Polarization: -16.69 SS G_CDS: -0.95 Total: -17.64 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: 4.27 Total: 8.25 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -2.59 Total: -3.20 kcal Atomic # 8 Polarization: -12.48 SS G_CDS: -4.89 Total: -17.36 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: 2.04 Total: 1.57 kcal Total: -26.28 -2.10 -28.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.207 kcal (2) G-P(sol) polarization free energy of solvation -26.277 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.484 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.105 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.382 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.589 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds