Wall clock time and date at job start Tue Mar 9 2021 13:05:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.37646 * 125.68081 * 2 1 4 4 C 1.46670 * 126.21828 * 359.97438 * 3 2 1 5 5 O 1.21697 * 120.00502 * 5.49380 * 4 3 2 6 6 N 1.34786 * 119.99861 * 185.49970 * 4 3 2 7 7 C 1.46497 * 119.99935 * 185.10228 * 6 4 3 8 8 C 1.53002 * 109.46751 * 179.97438 * 7 6 4 9 9 H 1.09001 * 112.84870 * 43.80532 * 8 7 6 10 10 C 1.53786 * 113.61410 * 174.99972 * 8 7 6 11 11 C 1.53773 * 87.07865 * 139.98391 * 10 8 7 12 12 H 1.09008 * 113.61220 * 220.01747 * 11 10 8 13 13 O 1.42903 * 113.61931 * 89.12001 * 11 10 8 14 14 C 1.53777 * 113.61731 * 272.49776 * 8 7 6 15 15 C 1.37885 * 107.55401 * 179.97438 * 3 2 1 16 16 C 1.39880 * 107.09046 * 359.76592 * 15 3 2 17 17 Br 1.89099 * 126.07431 * 180.23668 * 16 15 3 18 18 C 1.35507 * 107.85277 * 0.38363 * 16 15 3 19 19 C 1.50702 * 125.57168 * 179.87401 * 18 16 15 20 20 O 1.42894 * 109.47061 * 149.69080 * 19 18 16 21 21 Si 1.86302 * 109.46970 * 29.69125 * 19 18 16 22 22 H 1.08999 * 109.47350 * 265.43725 * 1 2 3 23 23 H 1.09002 * 109.46889 * 25.44086 * 1 2 3 24 24 H 1.08998 * 109.47058 * 145.43437 * 1 2 3 25 25 H 0.96998 * 119.99255 * 5.09680 * 6 4 3 26 26 H 1.08992 * 109.47028 * 299.99639 * 7 6 4 27 27 H 1.09002 * 109.47174 * 60.00084 * 7 6 4 28 28 H 1.09000 * 113.60904 * 254.53486 * 10 8 7 29 29 H 1.08997 * 113.61334 * 25.34916 * 10 8 7 30 30 H 0.96701 * 114.00211 * 179.97438 * 13 11 10 31 31 H 1.09008 * 113.61287 * 334.56722 * 14 8 7 32 32 H 1.08998 * 113.61492 * 105.47356 * 14 8 7 33 33 H 1.08000 * 126.45280 * 180.02562 * 15 3 2 34 34 H 1.09003 * 109.47401 * 269.69368 * 19 18 16 35 35 H 0.96700 * 114.00671 * 300.00395 * 20 19 18 36 36 H 1.48507 * 109.99957 * 58.68290 * 21 19 18 37 37 H 1.48499 * 109.99956 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8121 2.5122 -0.0005 5 8 0.6259 2.7647 0.0999 6 7 2.7072 3.5137 -0.1123 7 6 2.2660 4.9062 -0.0008 8 6 3.4695 5.8369 -0.1629 9 1 4.1271 5.5401 -0.9800 10 6 3.0963 7.3287 -0.1835 11 6 4.3518 7.5738 0.6698 12 1 4.2067 8.3130 1.4577 13 8 5.5317 7.8076 -0.1017 14 6 4.2103 6.1212 1.1543 15 6 3.5782 0.6891 0.0006 16 6 3.5529 -0.7095 0.0064 17 35 5.0609 -1.8504 0.0161 18 6 2.2558 -1.1015 0.0006 19 6 1.7713 -2.5285 0.0012 20 8 0.5133 -2.6042 0.6748 21 14 3.0120 -3.6052 0.8799 22 1 -0.3634 -0.0817 1.0244 23 1 -0.3633 0.9280 -0.4415 24 1 -0.3633 -0.8462 -0.5830 25 1 3.6434 3.3123 -0.2666 26 1 1.5342 5.1190 -0.7799 27 1 1.8124 5.0664 0.9773 28 1 3.1478 7.7779 -1.1753 29 1 2.1639 7.5526 0.3347 30 1 6.3247 7.9628 0.4296 31 1 3.5832 6.0153 2.0396 32 1 5.1613 5.5959 1.2426 33 1 4.4583 1.3150 0.0011 34 1 1.6545 -2.8731 -1.0264 35 1 0.5423 -2.3123 1.5962 36 1 3.2039 -3.1264 2.2725 37 1 2.5455 -5.0150 0.8879 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12857620_5000100.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:19 Heat of formation + Delta-G solvation = -43.893270 kcal Electronic energy + Delta-G solvation = -22278.260054 eV Core-core repulsion = 18684.001921 eV Total energy + Delta-G solvation = -3594.258132 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.041 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -42.92778 -40.84567 -39.94346 -37.99661 -36.56945 -35.18118 -34.50218 -32.52573 -31.28573 -29.20253 -27.40304 -26.74104 -26.57860 -23.79438 -23.03716 -21.59226 -20.90138 -20.36606 -19.09311 -18.46690 -17.85847 -17.32358 -17.23546 -16.55622 -16.41244 -16.10054 -15.67555 -15.58687 -15.40943 -15.06900 -14.62830 -14.56178 -14.34151 -14.12172 -13.87172 -13.71705 -13.34449 -13.18905 -12.95025 -12.81314 -12.54677 -12.18192 -12.10240 -11.83223 -11.64776 -11.27134 -11.15279 -10.90677 -10.62942 -10.26284 -9.90279 -9.36349 -4.70030 0.12380 0.33457 0.88671 1.18869 1.43082 1.55721 1.92373 2.10753 2.25756 3.06451 3.18421 3.27098 3.46387 3.62019 3.65944 3.74359 3.79377 3.98002 4.07004 4.21822 4.27694 4.33869 4.38829 4.50056 4.60532 4.62316 4.66279 4.78561 4.83275 4.89501 5.07167 5.15397 5.21420 5.29221 5.45576 5.55407 5.75116 6.22048 6.36609 6.89111 7.00733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.391 5.391 3 C -0.058 4.058 4 C 0.588 3.412 5 O -0.579 6.579 6 N -0.701 5.701 7 C 0.134 3.866 8 C -0.109 4.109 9 H 0.100 0.900 10 C -0.130 4.130 11 C 0.073 3.927 12 H 0.079 0.921 13 O -0.572 6.572 14 C -0.160 4.160 15 C -0.091 4.091 16 C -0.191 4.191 17 Br 0.091 6.909 18 C 0.058 3.942 19 C -0.040 4.040 20 O -0.542 6.542 21 Si 0.628 3.372 22 H 0.086 0.914 23 H 0.092 0.908 24 H 0.102 0.898 25 H 0.417 0.583 26 H 0.062 0.938 27 H 0.069 0.931 28 H 0.069 0.931 29 H 0.107 0.893 30 H 0.398 0.602 31 H 0.096 0.904 32 H 0.081 0.919 33 H 0.187 0.813 34 H 0.141 0.859 35 H 0.386 0.614 36 H -0.280 1.280 37 H -0.269 1.269 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.004 2.782 0.494 5.746 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 N -0.063 5.063 3 C -0.172 4.172 4 C 0.376 3.624 5 O -0.461 6.461 6 N -0.352 5.352 7 C 0.011 3.989 8 C -0.128 4.128 9 H 0.118 0.882 10 C -0.168 4.168 11 C 0.014 3.986 12 H 0.097 0.903 13 O -0.381 6.381 14 C -0.197 4.197 15 C -0.117 4.117 16 C -0.276 4.276 17 Br 0.175 6.825 18 C -0.065 4.065 19 C -0.151 4.151 20 O -0.349 6.349 21 Si 0.530 3.470 22 H 0.104 0.896 23 H 0.110 0.890 24 H 0.120 0.880 25 H 0.254 0.746 26 H 0.080 0.920 27 H 0.087 0.913 28 H 0.088 0.912 29 H 0.126 0.874 30 H 0.248 0.752 31 H 0.114 0.886 32 H 0.100 0.900 33 H 0.204 0.796 34 H 0.159 0.841 35 H 0.235 0.765 36 H -0.206 1.206 37 H -0.194 1.194 Dipole moment (debyes) X Y Z Total from point charges 3.848 1.794 0.192 4.250 hybrid contribution -0.723 0.578 1.144 1.472 sum 3.124 2.372 1.335 4.144 Atomic orbital electron populations 1.22430 0.74275 1.05503 1.04883 1.43930 1.07743 1.03867 1.50720 1.20165 0.90414 0.87710 1.18867 1.17012 0.85379 0.83869 0.76172 1.90806 1.17593 1.85178 1.52536 1.45543 1.11766 1.05539 1.72356 1.21448 0.96940 0.78598 1.01927 1.22668 0.96181 0.94349 0.99611 0.88158 1.23099 0.97522 0.94744 1.01447 1.22730 0.86158 0.95993 0.93685 0.90279 1.86422 1.19608 1.93943 1.38124 1.23712 1.01725 0.97246 0.97042 1.21503 0.95561 0.92591 1.02058 1.20687 0.90644 0.94931 1.21343 1.96309 1.32635 1.56192 1.97368 1.21049 0.89662 0.90232 1.05573 1.24713 0.93352 0.92539 1.04476 1.86552 1.29666 1.88801 1.29840 0.92735 0.92395 0.77981 0.83919 0.89564 0.88988 0.87968 0.74563 0.91989 0.91275 0.91210 0.87447 0.75173 0.88588 0.90044 0.79605 0.84129 0.76535 1.20563 1.19441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.13 9.27 127.77 1.18 1.32 16 2 N -0.39 -1.26 3.16 -519.61 -1.64 -2.91 16 3 C -0.06 -0.16 6.88 40.35 0.28 0.12 16 4 C 0.59 2.58 7.77 86.44 0.67 3.25 16 5 O -0.58 -6.59 14.65 -4.34 -0.06 -6.65 16 6 N -0.70 1.38 5.53 -467.08 -2.58 -1.20 16 7 C 0.13 -0.27 5.52 86.38 0.48 0.20 16 8 C -0.11 0.52 3.69 -10.27 -0.04 0.48 16 9 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16 10 C -0.13 0.47 7.47 31.12 0.23 0.71 16 11 C 0.07 -0.32 5.28 31.12 0.16 -0.16 16 12 H 0.08 -0.50 8.14 -2.38 -0.02 -0.52 16 13 O -0.57 1.09 13.59 -148.98 -2.02 -0.94 16 14 C -0.16 1.01 7.46 31.12 0.23 1.24 16 15 C -0.09 0.14 10.33 22.58 0.23 0.37 16 16 C -0.19 -0.02 6.16 22.04 0.14 0.11 16 17 Br 0.09 -0.24 28.22 -20.37 -0.57 -0.81 16 18 C 0.06 0.10 6.15 41.34 0.25 0.36 16 19 C -0.04 -0.03 2.90 71.24 0.21 0.17 16 20 O -0.54 -0.92 10.50 -148.98 -1.56 -2.48 16 21 Si 0.63 1.66 27.08 68.60 1.86 3.51 16 22 H 0.09 0.03 8.14 -2.39 -0.02 0.01 16 23 H 0.09 0.46 6.19 -2.39 -0.01 0.45 16 24 H 0.10 0.04 7.11 -2.39 -0.02 0.02 16 25 H 0.42 -3.05 7.42 -92.71 -0.69 -3.74 16 26 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 27 H 0.07 -0.07 7.84 -2.39 -0.02 -0.09 16 28 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 29 H 0.11 -0.61 8.10 -2.39 -0.02 -0.63 16 30 H 0.40 -3.90 9.12 -74.06 -0.68 -4.58 16 31 H 0.10 -0.66 7.90 -2.38 -0.02 -0.68 16 32 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 33 H 0.19 -1.55 7.49 -2.91 -0.02 -1.57 16 34 H 0.14 -0.21 7.96 -2.39 -0.02 -0.23 16 35 H 0.39 -0.92 8.70 -74.06 -0.64 -1.56 16 36 H -0.28 -2.17 7.11 99.48 0.71 -1.46 16 37 H -0.27 -2.34 7.11 99.48 0.71 -1.64 16 Total: 0.00 -17.20 322.49 -3.40 -20.60 By element: Atomic # 1 Polarization: -16.47 SS G_CDS: -0.84 Total: -17.31 kcal Atomic # 6 Polarization: 4.16 SS G_CDS: 4.03 Total: 8.19 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -4.23 Total: -4.11 kcal Atomic # 8 Polarization: -6.42 SS G_CDS: -3.65 Total: -10.08 kcal Atomic # 14 Polarization: 1.66 SS G_CDS: 1.86 Total: 3.51 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.57 Total: -0.81 kcal Total: -17.20 -3.40 -20.60 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_5000100.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.293 kcal (2) G-P(sol) polarization free energy of solvation -17.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.893 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds