Wall clock time and date at job start Tue Mar 9 2021 13:05:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38237 * 119.94410 * 300.00207 * 4 2 1 6 6 C 1.38187 * 120.07712 * 179.97438 * 5 4 2 7 7 C 1.38678 * 119.95234 * 0.02562 * 6 5 4 8 8 O 1.35909 * 120.06205 * 180.02562 * 7 6 5 9 9 C 1.42901 * 116.99892 * 359.97438 * 8 7 6 10 10 C 1.50704 * 109.47256 * 180.02562 * 9 8 7 11 11 O 1.21268 * 119.99987 * 359.97438 * 10 9 8 12 12 N 1.34784 * 119.99689 * 180.02562 * 10 9 8 13 13 C 1.46494 * 119.99523 * 179.97438 * 12 10 9 14 14 C 1.53002 * 109.47015 * 179.97438 * 13 12 10 15 15 H 1.08996 * 112.84948 * 316.19444 * 14 13 12 16 16 C 1.53774 * 113.61505 * 87.50497 * 14 13 12 17 17 C 1.53773 * 87.08293 * 139.98292 * 16 14 13 18 18 H 1.09004 * 113.61245 * 220.01614 * 17 16 14 19 19 O 1.42904 * 113.69475 * 89.12726 * 17 16 14 20 20 C 1.53775 * 87.08260 * 334.56529 * 17 16 14 21 21 C 1.38834 * 119.87993 * 359.97438 * 7 6 5 22 22 Br 1.89107 * 120.03392 * 180.02562 * 21 7 6 23 23 C 1.38193 * 119.93116 * 359.73098 * 21 7 6 24 24 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 25 25 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 26 26 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 27 27 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 28 28 H 1.08008 * 119.96214 * 359.97438 * 5 4 2 29 29 H 1.08001 * 120.02603 * 179.97438 * 6 5 4 30 30 H 1.09002 * 109.47453 * 300.00489 * 9 8 7 31 31 H 1.09001 * 109.46935 * 60.00034 * 9 8 7 32 32 H 0.97001 * 120.00126 * 0.02562 * 12 10 9 33 33 H 1.08994 * 109.47257 * 300.00080 * 13 12 10 34 34 H 1.09001 * 109.47410 * 59.99998 * 13 12 10 35 35 H 1.09010 * 113.61329 * 254.53074 * 16 14 13 36 36 H 1.09003 * 113.61449 * 25.42828 * 16 14 13 37 37 H 0.96703 * 113.99999 * 82.46447 * 19 17 16 38 38 H 1.09006 * 113.61833 * 270.88674 * 20 17 16 39 39 H 1.08997 * 113.61707 * 139.98059 * 20 17 16 40 40 H 1.08000 * 119.97751 * 180.29662 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4483 6 6 2.0551 -2.6876 -2.5760 7 6 2.8525 -2.0153 -3.4899 8 8 3.3044 -2.6561 -4.6001 9 6 2.9196 -4.0227 -4.7621 10 6 3.5099 -4.5629 -6.0391 11 8 4.1925 -3.8478 -6.7416 12 7 3.2784 -5.8404 -6.4010 13 6 3.8518 -6.3652 -7.6428 14 6 3.4399 -7.8285 -7.8161 15 1 3.5240 -8.4039 -6.8942 16 6 2.0931 -8.0082 -8.5361 17 6 2.7348 -9.1955 -9.2731 18 1 2.4589 -9.2567 -10.3258 19 8 2.5913 -10.4418 -8.5886 20 6 4.0907 -8.5120 -9.0303 21 6 3.1876 -0.6862 -3.2694 22 35 4.2741 0.2350 -4.5132 23 6 2.7212 -0.0353 -2.1431 24 1 -0.3934 0.4418 -0.7650 25 1 1.7923 -0.5138 0.8899 26 1 1.5616 2.4678 1.2086 27 1 3.5346 1.7703 -0.0322 28 1 0.9758 -2.5574 -0.7361 29 1 1.7934 -3.7217 -2.7450 30 1 3.2864 -4.6061 -3.9175 31 1 1.8327 -4.0914 -4.8063 32 1 2.7316 -6.4120 -5.8397 33 1 3.4853 -5.7817 -8.4873 34 1 4.9388 -6.2969 -7.5984 35 1 1.2778 -8.2956 -7.8720 36 1 1.8337 -7.1764 -9.1910 37 1 1.7404 -10.8765 -8.7374 38 1 4.3775 -7.8179 -9.8203 39 1 4.8883 -9.2060 -8.7652 40 1 2.9774 1.0001 -1.9732 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12857620_6201210.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:24 Heat of formation + Delta-G solvation = -86.818670 kcal Electronic energy + Delta-G solvation = -24547.857156 eV Core-core repulsion = 20570.255218 eV Total energy + Delta-G solvation = -3977.601939 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.045 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -41.72403 -40.97985 -40.21569 -39.10101 -37.30086 -36.55629 -35.01642 -33.49375 -32.23393 -30.88074 -30.04511 -28.22500 -26.88869 -26.37995 -24.24703 -23.50778 -22.46781 -21.78996 -20.67766 -19.61992 -18.78024 -18.29804 -17.94494 -17.64015 -17.27551 -16.88645 -16.55525 -16.49698 -16.10687 -15.96331 -15.71001 -15.52804 -15.09231 -14.77406 -14.55750 -14.32561 -14.09927 -14.01662 -13.75975 -13.55293 -13.46070 -13.06568 -12.50961 -12.33192 -12.26316 -12.17920 -12.02264 -11.84012 -11.80378 -11.34817 -11.06199 -11.01368 -10.76547 -10.53100 -10.20932 -10.02156 -9.31942 -5.08533 -0.07478 0.03116 0.70272 1.22403 1.32273 1.46519 1.58465 1.92715 2.34043 2.41468 2.93198 3.29720 3.36823 3.42724 3.44487 3.47119 3.57810 3.65961 3.70803 3.78422 3.79587 3.84603 3.99578 4.13787 4.26158 4.32149 4.37733 4.52423 4.53578 4.57621 4.67764 4.71359 4.72841 4.87699 4.94838 5.00190 5.14386 5.22063 5.30692 5.37212 5.96485 6.29499 6.48889 6.53962 7.05990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.060 4.060 3 Si 0.679 3.321 4 C -0.152 4.152 5 C -0.035 4.035 6 C -0.205 4.205 7 C 0.161 3.839 8 O -0.274 6.274 9 C 0.038 3.962 10 C 0.514 3.486 11 O -0.507 6.507 12 N -0.726 5.726 13 C 0.130 3.870 14 C -0.118 4.118 15 H 0.101 0.899 16 C -0.168 4.168 17 C 0.077 3.923 18 H 0.071 0.929 19 O -0.552 6.552 20 C -0.125 4.125 21 C -0.119 4.119 22 Br -0.023 7.023 23 C -0.050 4.050 24 H 0.380 0.620 25 H 0.117 0.883 26 H -0.250 1.250 27 H -0.254 1.254 28 H 0.138 0.862 29 H 0.139 0.861 30 H 0.097 0.903 31 H 0.097 0.903 32 H 0.402 0.598 33 H 0.073 0.927 34 H 0.073 0.927 35 H 0.074 0.926 36 H 0.092 0.908 37 H 0.383 0.617 38 H 0.099 0.901 39 H 0.081 0.919 40 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.933 -3.843 -0.642 6.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.171 4.171 3 Si 0.581 3.419 4 C -0.154 4.154 5 C -0.053 4.053 6 C -0.224 4.224 7 C 0.113 3.887 8 O -0.185 6.185 9 C -0.041 4.041 10 C 0.298 3.702 11 O -0.381 6.381 12 N -0.380 5.380 13 C 0.007 3.993 14 C -0.137 4.137 15 H 0.119 0.881 16 C -0.206 4.206 17 C 0.017 3.983 18 H 0.089 0.911 19 O -0.358 6.358 20 C -0.162 4.162 21 C -0.200 4.200 22 Br 0.062 6.938 23 C -0.069 4.069 24 H 0.228 0.772 25 H 0.134 0.866 26 H -0.175 1.175 27 H -0.178 1.178 28 H 0.155 0.845 29 H 0.157 0.843 30 H 0.115 0.885 31 H 0.115 0.885 32 H 0.237 0.763 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.093 0.907 36 H 0.110 0.890 37 H 0.231 0.769 38 H 0.117 0.883 39 H 0.100 0.900 40 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.697 -2.444 -0.627 3.693 hybrid contribution -1.118 -1.483 0.628 1.960 sum -3.814 -3.927 0.001 5.474 Atomic orbital electron populations 1.86506 1.16964 1.81646 1.49373 1.24927 0.85279 1.09905 0.97004 0.94777 0.81471 0.78113 0.87567 1.20251 1.01574 0.95535 0.97998 1.20939 0.95522 0.93286 0.95602 1.21292 1.03183 1.01295 0.96626 1.18637 0.92852 0.90796 0.86442 1.86280 1.69561 1.23870 1.38799 1.22552 1.01162 0.82634 0.97772 1.19943 0.81405 0.82193 0.86645 1.90809 1.37008 1.57145 1.53117 1.45797 1.54517 1.11971 1.25755 1.21459 0.98960 0.93006 0.85916 1.22757 0.97073 0.94535 0.99293 0.88073 1.23760 0.97074 0.99532 1.00197 1.22671 0.97325 0.83461 0.94797 0.91143 1.86465 1.41405 1.34618 1.73280 1.23030 0.96692 0.98770 0.97748 1.20998 1.06702 0.93296 0.98958 1.96816 1.65602 1.74625 1.56749 1.20854 0.95299 0.99395 0.91356 0.77235 0.86602 1.17514 1.17843 0.84462 0.84305 0.88541 0.88480 0.76341 0.90899 0.90897 0.90706 0.88986 0.76899 0.88255 0.89989 0.84058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.39 12.77 -35.23 -0.45 -0.06 16 2 C -0.06 0.06 2.82 36.01 0.10 0.16 16 3 Si 0.68 -0.76 29.78 -169.99 -5.06 -5.82 16 4 C -0.15 0.07 5.39 -104.60 -0.56 -0.49 16 5 C -0.03 0.03 9.60 -39.60 -0.38 -0.35 16 6 C -0.20 0.19 9.04 -39.44 -0.36 -0.17 16 7 C 0.16 0.24 6.68 -39.20 -0.26 -0.02 16 8 O -0.27 -0.69 9.01 -39.36 -0.35 -1.04 16 9 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 10 C 0.51 0.60 7.91 -10.98 -0.09 0.51 16 11 O -0.51 -3.20 16.50 -14.34 -0.24 -3.43 16 12 N -0.73 1.35 5.56 -60.30 -0.34 1.01 16 13 C 0.13 -0.16 5.51 -4.04 -0.02 -0.18 16 14 C -0.12 0.28 3.69 -89.81 -0.33 -0.05 16 15 H 0.10 -0.21 8.14 -51.93 -0.42 -0.64 16 16 C -0.17 0.49 7.46 -25.93 -0.19 0.29 16 17 C 0.08 -0.15 5.27 -25.93 -0.14 -0.29 16 18 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 19 O -0.55 0.45 13.59 -35.23 -0.48 -0.02 16 20 C -0.12 0.23 7.47 -25.92 -0.19 0.04 16 21 C -0.12 -0.25 6.24 -39.38 -0.25 -0.50 16 22 Br -0.02 -0.08 33.16 -68.01 -2.26 -2.33 16 23 C -0.05 -0.02 8.40 -39.58 -0.33 -0.35 16 24 H 0.38 -1.67 8.70 45.56 0.40 -1.27 16 25 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 26 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 27 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 28 H 0.14 -0.29 8.06 -52.48 -0.42 -0.71 16 29 H 0.14 -0.52 6.30 -52.49 -0.33 -0.85 16 30 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 31 H 0.10 -0.40 7.66 -51.93 -0.40 -0.80 16 32 H 0.40 -1.95 8.47 -40.82 -0.35 -2.30 16 33 H 0.07 -0.03 7.84 -51.93 -0.41 -0.44 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.07 -0.23 8.14 -51.92 -0.42 -0.66 16 36 H 0.09 -0.28 7.90 -51.93 -0.41 -0.69 16 37 H 0.38 -1.81 9.12 45.56 0.42 -1.40 16 38 H 0.10 -0.27 8.10 -51.93 -0.42 -0.70 16 39 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.14 -0.14 4.87 -52.49 -0.26 -0.39 16 LS Contribution 358.64 15.07 5.40 5.40 Total: 0.00 -10.35 358.64 -10.89 -21.24 By element: Atomic # 1 Polarization: -9.38 SS G_CDS: -4.30 Total: -13.69 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -2.82 Total: -1.26 kcal Atomic # 7 Polarization: 1.35 SS G_CDS: -0.34 Total: 1.01 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: -1.52 Total: -4.56 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.06 Total: -5.82 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.26 Total: -2.33 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -10.35 -10.89 -21.24 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_6201210.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.579 kcal (2) G-P(sol) polarization free energy of solvation -10.355 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.240 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds