Wall clock time and date at job start Tue Mar 9 2021 13:05:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46895 * 110.99938 * 2 1 4 4 C 1.50709 * 109.47388 * 293.95468 * 3 2 1 5 5 O 1.21281 * 119.99470 * 359.97438 * 4 3 2 6 6 N 1.34776 * 119.99830 * 179.97438 * 4 3 2 7 7 C 1.46504 * 119.99734 * 180.02562 * 6 4 3 8 8 C 1.52989 * 109.46955 * 180.02562 * 7 6 4 9 9 H 1.08996 * 112.85143 * 314.66470 * 8 7 6 10 10 C 1.53786 * 113.61789 * 85.86494 * 8 7 6 11 11 C 1.53950 * 87.02103 * 139.94801 * 10 8 7 12 12 H 1.08997 * 113.74427 * 220.05569 * 11 10 8 13 13 O 1.42906 * 113.53774 * 89.19011 * 11 10 8 14 14 C 1.53783 * 87.11592 * 334.63832 * 11 10 8 15 15 C 1.39668 * 110.99817 * 123.95556 * 2 1 3 16 16 C 1.38897 * 120.07449 * 116.04888 * 15 2 1 17 17 C 1.50705 * 120.03400 * 0.02562 * 16 15 2 18 18 O 1.42908 * 109.46603 * 74.72934 * 17 16 15 19 19 Si 1.86298 * 109.46780 * 194.72233 * 17 16 15 20 20 C 1.38119 * 119.92558 * 179.74753 * 16 15 2 21 21 C 1.38262 * 120.07752 * 0.26836 * 20 16 15 22 22 C 1.50702 * 119.93034 * 179.97438 * 21 20 16 23 23 F 1.39902 * 109.47172 * 89.99882 * 22 21 20 24 24 F 1.39898 * 109.46979 * 210.00481 * 22 21 20 25 25 F 1.39899 * 109.46707 * 330.00142 * 22 21 20 26 26 C 1.38315 * 120.14885 * 0.02562 * 21 20 16 27 27 C 1.38088 * 120.07115 * 359.97438 * 26 21 20 28 28 H 1.08997 * 109.47116 * 296.04231 * 1 2 3 29 29 H 1.09002 * 109.47129 * 56.04669 * 1 2 3 30 30 H 1.09003 * 109.47491 * 176.04325 * 1 2 3 31 31 H 1.08999 * 109.47209 * 53.95673 * 3 2 1 32 32 H 1.09006 * 109.47327 * 173.95520 * 3 2 1 33 33 H 0.96989 * 120.00304 * 0.02562 * 6 4 3 34 34 H 1.09002 * 109.46633 * 300.00229 * 7 6 4 35 35 H 1.08998 * 109.46675 * 59.99745 * 7 6 4 36 36 H 1.08996 * 113.61172 * 254.52654 * 10 8 7 37 37 H 1.09001 * 113.61007 * 25.42979 * 10 8 7 38 38 H 0.96698 * 113.99754 * 82.50021 * 13 11 10 39 39 H 1.09000 * 113.61216 * 270.81342 * 14 11 10 40 40 H 1.09001 * 113.61589 * 139.90718 * 14 11 10 41 41 H 1.08991 * 109.47403 * 314.72450 * 17 16 15 42 42 H 0.96700 * 113.99903 * 299.99099 * 18 17 16 43 43 H 1.48506 * 109.99834 * 60.00830 * 19 17 16 44 44 H 1.48502 * 110.00011 * 181.32094 * 19 17 16 45 45 H 1.08004 * 119.96265 * 180.25661 * 20 16 15 46 46 H 1.07998 * 119.96362 * 179.97438 * 26 21 20 47 47 H 1.08001 * 120.03529 * 180.02562 * 27 26 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6369 2.0472 -1.2985 5 8 1.0054 1.4453 -2.1411 6 7 2.0180 3.3202 -1.5232 7 6 1.6690 3.9774 -2.7853 8 6 2.2173 5.4056 -2.7853 9 1 2.0276 5.9318 -1.8498 10 6 3.6755 5.5057 -3.2636 11 6 3.2586 6.7865 -4.0092 12 1 3.7080 6.8850 -4.9973 13 8 3.3848 7.9721 -3.2214 14 6 1.8317 6.2135 -4.0357 15 6 1.9695 -0.7283 1.0816 16 6 2.7117 -1.8814 0.8605 17 6 2.9787 -2.3482 -0.5473 18 8 3.9707 -1.5119 -1.1463 19 14 3.5888 -4.1081 -0.5126 20 6 3.2096 -2.5964 1.9322 21 6 2.9652 -2.1686 3.2241 22 6 3.5096 -2.9516 4.3911 23 9 4.7815 -2.4720 4.7218 24 9 2.6558 -2.8055 5.4896 25 9 3.5968 -4.3043 4.0449 26 6 2.2214 -1.0242 3.4480 27 6 1.7207 -0.3047 2.3811 28 1 -0.3633 0.4512 0.9233 29 1 -0.3633 0.5740 -0.8525 30 1 -0.3634 -1.0252 -0.0709 31 1 1.5611 1.9273 0.8309 32 1 3.0798 1.3444 0.1082 33 1 2.5233 3.8014 -0.8495 34 1 2.1033 3.4217 -3.6164 35 1 0.5847 4.0040 -2.8932 36 1 4.3882 5.6809 -2.4578 37 1 3.9746 4.6929 -3.9255 38 1 4.2800 8.3372 -3.2009 39 1 1.6259 5.5947 -4.9091 40 1 1.0582 6.9593 -3.8523 41 1 2.0585 -2.2941 -1.1288 42 1 3.7201 -0.5794 -1.1977 43 1 2.5662 -4.9881 0.1081 44 1 3.8861 -4.5699 -1.8923 45 1 3.7903 -3.4907 1.7609 46 1 2.0320 -0.6931 4.4584 47 1 1.1403 0.5891 2.5566 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12857620_6406254.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:27 Heat of formation + Delta-G solvation = -192.489885 kcal Electronic energy + Delta-G solvation = -34889.867385 eV Core-core repulsion = 29625.782698 eV Total energy + Delta-G solvation = -5264.084686 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.149 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -51.18935 -48.71463 -48.64941 -41.81132 -40.86725 -40.09518 -37.75295 -37.61969 -36.42324 -34.89690 -33.02705 -32.16505 -30.31157 -28.20856 -27.50824 -26.98267 -26.69680 -25.07900 -23.69818 -23.14353 -22.07768 -21.54041 -20.48502 -19.54787 -19.49806 -19.44655 -18.53740 -18.23524 -18.08423 -17.58310 -17.07261 -16.90808 -16.71983 -16.27378 -16.13174 -15.84455 -15.64943 -15.57053 -15.53461 -15.23689 -15.13391 -15.06637 -14.83937 -14.83324 -14.80572 -14.64480 -14.32726 -14.23497 -14.07813 -13.80236 -13.59465 -13.36013 -13.20279 -13.07788 -12.90918 -12.83953 -12.59102 -12.22195 -12.13092 -11.83568 -11.46228 -11.21977 -11.17915 -10.97904 -10.62026 -10.23616 -10.12087 -10.08073 -9.69218 -4.97768 -0.37643 0.00753 1.29928 1.55437 1.59176 1.59934 1.91094 1.92030 2.17144 2.61948 2.72428 2.94257 3.16184 3.36727 3.48656 3.51461 3.62110 3.65512 3.72554 3.77361 3.83725 3.97645 4.01628 4.02672 4.06825 4.16775 4.27638 4.28792 4.32839 4.41387 4.48481 4.50989 4.61820 4.66164 4.76790 4.84435 4.86715 4.87030 4.95688 4.96918 5.05268 5.11585 5.18214 5.34454 5.37366 5.49349 5.53588 6.05603 6.53477 6.55401 6.86324 7.24303 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.507 5.507 3 C 0.038 3.962 4 C 0.512 3.488 5 O -0.564 6.564 6 N -0.716 5.716 7 C 0.134 3.866 8 C -0.107 4.107 9 H 0.099 0.901 10 C -0.158 4.158 11 C 0.072 3.928 12 H 0.078 0.922 13 O -0.573 6.573 14 C -0.132 4.132 15 C 0.129 3.871 16 C -0.100 4.100 17 C -0.066 4.066 18 O -0.540 6.540 19 Si 0.788 3.212 20 C -0.061 4.061 21 C -0.184 4.184 22 C 0.509 3.491 23 F -0.177 7.177 24 F -0.179 7.179 25 F -0.179 7.179 26 C -0.053 4.053 27 C -0.139 4.139 28 H 0.050 0.950 29 H 0.079 0.921 30 H 0.064 0.936 31 H 0.100 0.900 32 H 0.128 0.872 33 H 0.415 0.585 34 H 0.061 0.939 35 H 0.056 0.944 36 H 0.080 0.920 37 H 0.094 0.906 38 H 0.398 0.602 39 H 0.105 0.895 40 H 0.068 0.932 41 H 0.073 0.927 42 H 0.370 0.630 43 H -0.265 1.265 44 H -0.293 1.293 45 H 0.152 0.848 46 H 0.157 0.843 47 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.122 6.249 2.199 6.957 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 N -0.228 5.228 3 C -0.091 4.091 4 C 0.298 3.702 5 O -0.443 6.443 6 N -0.370 5.370 7 C 0.010 3.990 8 C -0.126 4.126 9 H 0.117 0.883 10 C -0.196 4.196 11 C 0.013 3.987 12 H 0.096 0.904 13 O -0.381 6.381 14 C -0.170 4.170 15 C 0.035 3.965 16 C -0.101 4.101 17 C -0.175 4.175 18 O -0.347 6.347 19 Si 0.690 3.310 20 C -0.079 4.079 21 C -0.186 4.186 22 C 0.455 3.545 23 F -0.159 7.159 24 F -0.160 7.160 25 F -0.161 7.161 26 C -0.071 4.071 27 C -0.158 4.158 28 H 0.068 0.932 29 H 0.097 0.903 30 H 0.082 0.918 31 H 0.118 0.882 32 H 0.146 0.854 33 H 0.252 0.748 34 H 0.080 0.920 35 H 0.074 0.926 36 H 0.099 0.901 37 H 0.112 0.888 38 H 0.248 0.752 39 H 0.123 0.877 40 H 0.087 0.913 41 H 0.091 0.909 42 H 0.219 0.781 43 H -0.190 1.190 44 H -0.221 1.221 45 H 0.169 0.831 46 H 0.175 0.825 47 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 1.368 4.126 0.954 4.451 hybrid contribution -0.748 1.596 0.469 1.824 sum 0.620 5.722 1.423 5.929 Atomic orbital electron populations 1.22562 0.84279 1.03027 1.02150 1.59154 1.09914 1.13325 1.40430 1.22190 1.03726 0.87917 0.95277 1.20756 0.78790 0.81666 0.88954 1.90722 1.40812 1.64947 1.47789 1.45858 1.57602 1.13216 1.20293 1.21295 0.99626 0.92030 0.86019 1.22635 0.96822 0.93646 0.99489 0.88282 1.23709 0.96207 0.98549 1.01126 1.22783 0.97487 0.84461 0.93935 0.90421 1.86417 1.36742 1.42209 1.72740 1.23100 0.96491 0.98800 0.98603 1.18859 0.94866 0.93443 0.89339 1.20178 0.98538 0.95572 0.95810 1.25311 0.95592 1.06694 0.89896 1.86690 1.42688 1.22857 1.82424 0.92634 0.86682 0.70281 0.81415 1.20813 0.97310 0.99312 0.90513 1.19982 1.06366 0.99900 0.92330 1.18326 0.75745 0.77701 0.82706 1.93243 1.41293 1.87947 1.93391 1.93199 1.70516 1.95484 1.56784 1.93205 1.96116 1.34770 1.91979 1.21107 0.93028 0.91624 1.01364 1.21864 1.00884 1.01659 0.91437 0.93184 0.90270 0.91760 0.88236 0.85385 0.74805 0.92044 0.92592 0.90089 0.88768 0.75176 0.87693 0.91273 0.90944 0.78090 1.19009 1.22057 0.83125 0.82535 0.82313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.02 127.69 1.15 1.13 16 2 N -0.51 0.95 3.17 -724.42 -2.30 -1.35 16 3 C 0.04 -0.26 4.89 85.56 0.42 0.16 16 4 C 0.51 -0.59 7.52 87.66 0.66 0.07 16 5 O -0.56 -4.76 14.33 -3.03 -0.04 -4.80 16 6 N -0.72 3.96 5.56 -463.06 -2.57 1.39 16 7 C 0.13 -0.40 5.50 86.37 0.47 0.07 16 8 C -0.11 0.56 3.68 -10.27 -0.04 0.52 16 9 H 0.10 -0.47 8.14 -2.39 -0.02 -0.48 16 10 C -0.16 1.01 7.47 31.18 0.23 1.24 16 11 C 0.07 -0.30 5.28 31.18 0.16 -0.13 16 12 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 13 O -0.57 1.07 13.59 -148.98 -2.02 -0.96 16 14 C -0.13 0.45 7.48 31.12 0.23 0.68 16 15 C 0.13 -0.29 4.61 38.22 0.18 -0.12 16 16 C -0.10 -0.04 5.28 -19.73 -0.10 -0.14 16 17 C -0.07 -0.19 2.30 71.24 0.16 -0.03 16 18 O -0.54 -2.22 12.65 -148.98 -1.89 -4.11 16 19 Si 0.79 1.87 30.17 68.60 2.07 3.94 16 20 C -0.06 0.02 8.01 22.25 0.18 0.20 16 21 C -0.18 0.16 5.46 -19.84 -0.11 0.05 16 22 C 0.51 0.59 3.36 71.24 0.24 0.83 16 23 F -0.18 -0.44 17.30 44.97 0.78 0.34 16 24 F -0.18 -0.34 16.45 44.97 0.74 0.40 16 25 F -0.18 -0.49 16.46 44.97 0.74 0.25 16 26 C -0.05 0.23 9.39 22.25 0.21 0.43 16 27 C -0.14 0.79 8.66 22.40 0.19 0.99 16 28 H 0.05 -0.23 7.33 -2.39 -0.02 -0.25 16 29 H 0.08 0.28 5.83 -2.39 -0.01 0.27 16 30 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 31 H 0.10 -1.16 7.49 -2.39 -0.02 -1.17 16 32 H 0.13 -1.30 8.06 -2.38 -0.02 -1.32 16 33 H 0.42 -4.64 8.47 -92.72 -0.79 -5.42 16 34 H 0.06 -0.04 7.87 -2.39 -0.02 -0.06 16 35 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 36 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 37 H 0.09 -0.62 7.92 -2.39 -0.02 -0.64 16 38 H 0.40 -3.88 9.12 -74.06 -0.68 -4.56 16 39 H 0.10 -0.53 8.10 -2.39 -0.02 -0.55 16 40 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 41 H 0.07 0.39 7.79 -2.39 -0.02 0.37 16 42 H 0.37 0.37 8.32 -74.06 -0.62 -0.25 16 43 H -0.26 -1.30 7.11 99.48 0.71 -0.59 16 44 H -0.29 -2.74 7.11 99.48 0.71 -2.03 16 45 H 0.15 -0.37 4.67 -2.91 -0.01 -0.38 16 46 H 0.16 -1.20 7.60 -2.91 -0.02 -1.22 16 47 H 0.16 -1.68 7.14 -2.91 -0.02 -1.70 16 Total: 0.00 -18.83 396.35 -1.23 -20.06 By element: Atomic # 1 Polarization: -20.14 SS G_CDS: -0.98 Total: -21.12 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: 4.24 Total: 5.96 kcal Atomic # 7 Polarization: 4.91 SS G_CDS: -4.87 Total: 0.04 kcal Atomic # 8 Polarization: -5.91 SS G_CDS: -3.95 Total: -9.86 kcal Atomic # 9 Polarization: -1.27 SS G_CDS: 2.26 Total: 0.99 kcal Atomic # 14 Polarization: 1.87 SS G_CDS: 2.07 Total: 3.94 kcal Total: -18.83 -1.23 -20.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_6406254.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -172.433 kcal (2) G-P(sol) polarization free energy of solvation -18.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -191.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.231 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds