Wall clock time and date at job start Tue Mar 9 2021 13:05:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.33818 * 122.44781 * 2 1 4 4 C 1.50703 * 124.52021 * 0.02562 * 3 2 1 5 5 O 1.42897 * 109.46943 * 113.44820 * 4 3 2 6 6 Si 1.86301 * 109.47010 * 233.44235 * 4 3 2 7 7 S 1.70617 * 110.95358 * 179.74864 * 3 2 1 8 8 C 1.75829 * 91.56309 * 0.22358 * 7 3 2 9 9 C 1.46579 * 125.45828 * 179.97438 * 8 7 3 10 10 O 1.21702 * 119.99983 * 180.02562 * 9 8 7 11 11 N 1.34770 * 120.00010 * 0.02683 * 9 8 7 12 12 C 1.46506 * 120.00172 * 180.02562 * 11 9 8 13 13 C 1.52995 * 109.47129 * 180.02562 * 12 11 9 14 14 H 1.09001 * 112.84959 * 43.80536 * 13 12 11 15 15 C 1.53786 * 113.61397 * 174.99786 * 13 12 11 16 16 C 1.53775 * 87.08180 * 139.98179 * 15 13 12 17 17 H 1.09002 * 113.61923 * 219.93755 * 16 15 13 18 18 O 1.42900 * 113.61834 * 89.11645 * 16 15 13 19 19 C 1.53778 * 113.61730 * 272.49560 * 13 12 11 20 20 C 1.36651 * 109.08650 * 0.02562 * 8 7 3 21 21 H 1.08996 * 109.46518 * 85.00658 * 1 2 3 22 22 H 1.08994 * 109.47200 * 205.00444 * 1 2 3 23 23 H 1.09001 * 109.47321 * 325.00675 * 1 2 3 24 24 H 1.08988 * 109.47370 * 353.44570 * 4 3 2 25 25 H 0.96695 * 114.00510 * 179.97438 * 5 4 3 26 26 H 1.48495 * 110.00219 * 178.68172 * 6 4 3 27 27 H 1.48499 * 110.00314 * 300.00663 * 6 4 3 28 28 H 0.97004 * 120.00227 * 0.02562 * 11 9 8 29 29 H 1.09003 * 109.46955 * 299.99875 * 12 11 9 30 30 H 1.09001 * 109.47075 * 59.99621 * 12 11 9 31 31 H 1.09003 * 113.61226 * 254.53262 * 15 13 12 32 32 H 1.08999 * 113.61531 * 25.34864 * 15 13 12 33 33 H 0.96692 * 114.00447 * 180.02562 * 18 16 15 34 34 H 1.09006 * 113.60974 * 334.57015 * 19 13 12 35 35 H 1.08997 * 113.61402 * 105.46847 * 19 13 12 36 36 H 1.07992 * 123.35617 * 180.02562 * 20 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2251 1.1293 0.0000 4 6 1.6354 2.5162 0.0006 5 8 1.9429 3.1639 1.2366 6 14 2.3548 3.4973 -1.4104 7 16 3.8970 0.7893 0.0070 8 6 3.5938 -0.9427 0.0031 9 6 4.6232 -1.9861 0.0056 10 8 4.3002 -3.1595 0.0020 11 7 5.9273 -1.6462 0.0120 12 6 6.9562 -2.6891 0.0139 13 6 8.3412 -2.0391 0.0220 14 1 8.4132 -1.2049 0.7198 15 6 9.4947 -3.0485 0.1475 16 6 10.2534 -2.1896 -0.8779 17 1 10.8115 -2.7741 -1.6094 18 8 11.0341 -1.1488 -0.2870 19 6 8.8793 -1.7182 -1.3824 20 6 2.2447 -1.1601 -0.0039 21 1 -0.3632 0.0894 -1.0238 22 1 -0.3633 -0.9313 0.4344 23 1 -0.3634 0.8419 0.5893 24 1 0.5538 2.4512 -0.1163 25 1 1.5942 4.0630 1.3069 26 1 1.7578 4.8567 -1.4401 27 1 3.8293 3.5932 -1.2627 28 1 6.1847 -0.7109 0.0152 29 1 6.8418 -3.3107 0.9021 30 1 6.8493 -3.3066 -0.8779 31 1 9.9579 -3.0616 1.1341 32 1 9.2442 -4.0451 -0.2158 33 1 11.5134 -0.6049 -0.9270 34 1 8.4610 -2.3508 -2.1653 35 1 8.8457 -0.6574 -1.6309 36 1 1.8020 -2.1451 -0.0070 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12857620_6739946.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:35 Heat of formation + Delta-G solvation = -61.212035 kcal Electronic energy + Delta-G solvation = -19747.403517 eV Core-core repulsion = 16518.564407 eV Total energy + Delta-G solvation = -3228.839110 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.091 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -41.04315 -40.29132 -39.49075 -37.69917 -36.48559 -34.90922 -32.56054 -29.98321 -29.30413 -26.83812 -26.34787 -24.33843 -23.29505 -21.77257 -20.71109 -19.94722 -19.10564 -18.66180 -18.13259 -17.48303 -16.94449 -16.61893 -16.08728 -16.00783 -15.85981 -15.42644 -15.06449 -14.75728 -14.40252 -14.32702 -14.03287 -13.88814 -13.49434 -13.37229 -13.18567 -13.07293 -12.90112 -12.69458 -12.28391 -12.15867 -11.95155 -11.82455 -11.28073 -11.07857 -10.80547 -10.73746 -10.13737 -9.63801 -9.39467 -5.12490 -0.57945 0.38439 0.82693 1.05266 1.29223 1.43321 1.79985 2.08650 2.24579 2.99250 3.07200 3.44600 3.50463 3.63242 3.66277 3.81663 3.84824 4.11006 4.15036 4.22526 4.37462 4.38615 4.47641 4.60286 4.64853 4.67910 4.74724 4.76719 4.87399 4.94901 4.98594 5.07354 5.22786 5.28388 5.40314 5.41265 6.24886 6.40591 6.59876 7.15713 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C -0.097 4.097 3 C -0.188 4.188 4 C -0.043 4.043 5 O -0.533 6.533 6 Si 0.669 3.331 7 S 0.210 5.790 8 C -0.265 4.265 9 C 0.592 3.408 10 O -0.526 6.526 11 N -0.726 5.726 12 C 0.129 3.871 13 C -0.120 4.120 14 H 0.101 0.899 15 C -0.124 4.124 16 C 0.078 3.922 17 H 0.071 0.929 18 O -0.552 6.552 19 C -0.168 4.168 20 C -0.046 4.046 21 H 0.077 0.923 22 H 0.072 0.928 23 H 0.069 0.931 24 H 0.089 0.911 25 H 0.384 0.616 26 H -0.245 1.245 27 H -0.240 1.240 28 H 0.398 0.602 29 H 0.073 0.927 30 H 0.074 0.926 31 H 0.081 0.919 32 H 0.099 0.901 33 H 0.383 0.617 34 H 0.092 0.908 35 H 0.074 0.926 36 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.271 3.192 -3.864 5.019 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.111 4.111 3 C -0.307 4.307 4 C -0.154 4.154 5 O -0.341 6.341 6 Si 0.567 3.433 7 S 0.480 5.520 8 C -0.385 4.385 9 C 0.378 3.622 10 O -0.404 6.404 11 N -0.378 5.378 12 C 0.006 3.994 13 C -0.138 4.138 14 H 0.119 0.881 15 C -0.161 4.161 16 C 0.018 3.982 17 H 0.089 0.911 18 O -0.358 6.358 19 C -0.206 4.206 20 C -0.080 4.080 21 H 0.095 0.905 22 H 0.091 0.909 23 H 0.088 0.912 24 H 0.107 0.893 25 H 0.232 0.768 26 H -0.169 1.169 27 H -0.163 1.163 28 H 0.233 0.767 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.100 0.900 32 H 0.118 0.882 33 H 0.231 0.769 34 H 0.111 0.889 35 H 0.093 0.907 36 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 1.383 3.138 -3.429 4.850 hybrid contribution -1.327 0.533 0.511 1.519 sum 0.056 3.671 -2.918 4.690 Atomic orbital electron populations 1.20601 0.88977 1.03365 1.02834 1.18660 0.98128 0.90671 1.03599 1.23186 0.98423 0.98075 1.11039 1.24169 1.03099 0.92817 0.95359 1.86616 1.80231 1.32537 1.34752 0.94752 0.81812 0.81334 0.85409 1.83022 1.03544 0.97644 1.67742 1.24575 0.98115 0.97152 1.18687 1.16924 0.81580 0.87401 0.76289 1.90855 1.81639 1.18155 1.49769 1.45860 1.05442 1.10449 1.76013 1.21470 0.85116 0.89929 1.02905 1.22769 0.92756 0.99807 0.98505 0.88127 1.23021 0.94780 0.97636 1.00708 1.22670 0.90491 0.89526 0.95499 0.91131 1.86463 1.64910 1.46759 1.37626 1.23766 0.97487 1.02588 0.96761 1.20646 0.90855 0.99945 0.96506 0.90467 0.90899 0.91204 0.89295 0.76759 1.16863 1.16324 0.76724 0.90828 0.90787 0.90017 0.88240 0.76936 0.88939 0.90698 0.82559 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.13 9.48 36.01 0.34 0.48 16 2 C -0.10 -0.09 5.78 -106.45 -0.62 -0.71 16 3 C -0.19 -0.19 4.85 -35.86 -0.17 -0.37 16 4 C -0.04 0.03 2.76 36.01 0.10 0.13 16 5 O -0.53 -0.19 12.86 -35.23 -0.45 -0.64 16 6 Si 0.67 -1.00 32.15 -169.99 -5.46 -6.47 16 7 S 0.21 0.24 20.85 -107.50 -2.24 -2.00 16 8 C -0.26 -0.69 6.45 -36.79 -0.24 -0.93 16 9 C 0.59 2.28 7.78 -12.90 -0.10 2.18 16 10 O -0.53 -3.80 16.84 5.19 0.09 -3.71 16 11 N -0.73 -0.86 5.55 -61.65 -0.34 -1.20 16 12 C 0.13 0.05 5.51 -4.04 -0.02 0.03 16 13 C -0.12 0.11 3.69 -89.81 -0.33 -0.22 16 14 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 15 C -0.12 0.12 7.47 -25.92 -0.19 -0.08 16 16 C 0.08 -0.09 5.28 -25.92 -0.14 -0.22 16 17 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 18 O -0.55 -0.02 13.59 -35.23 -0.48 -0.50 16 19 C -0.17 0.28 7.46 -25.92 -0.19 0.09 16 20 C -0.05 -0.10 9.78 -40.43 -0.40 -0.49 16 21 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 22 H 0.07 -0.12 8.10 -51.93 -0.42 -0.54 16 23 H 0.07 -0.11 6.98 -51.93 -0.36 -0.48 16 24 H 0.09 -0.22 6.24 -51.94 -0.32 -0.55 16 25 H 0.38 -1.45 8.74 45.56 0.40 -1.06 16 26 H -0.24 0.02 7.11 56.52 0.40 0.42 16 27 H -0.24 -0.26 7.11 56.52 0.40 0.15 16 28 H 0.40 -0.22 7.59 -40.82 -0.31 -0.53 16 29 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 30 H 0.07 0.05 7.84 -51.93 -0.41 -0.36 16 31 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 32 H 0.10 -0.21 8.10 -51.93 -0.42 -0.63 16 33 H 0.38 -1.50 9.12 45.56 0.42 -1.09 16 34 H 0.09 -0.19 7.90 -51.93 -0.41 -0.60 16 35 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.16 0.26 8.06 -52.49 -0.42 -0.16 16 LS Contribution 319.87 15.07 4.82 4.82 Total: 0.00 -8.20 319.87 -10.03 -18.23 By element: Atomic # 1 Polarization: -4.40 SS G_CDS: -4.00 Total: -8.40 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -1.96 Total: -0.12 kcal Atomic # 7 Polarization: -0.86 SS G_CDS: -0.34 Total: -1.20 kcal Atomic # 8 Polarization: -4.02 SS G_CDS: -0.84 Total: -4.86 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.46 Total: -6.47 kcal Atomic # 16 Polarization: 0.24 SS G_CDS: -2.24 Total: -2.00 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -8.20 -10.03 -18.23 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_6739946.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.982 kcal (2) G-P(sol) polarization free energy of solvation -8.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.230 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds