Wall clock time and date at job start Tue Mar 9 2021 13:05:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86302 * 109.47054 * 2 1 4 4 C 1.50706 * 109.46837 * 240.00008 * 2 1 3 5 5 C 1.34232 * 126.49663 * 104.97658 * 4 2 1 6 6 N 1.36839 * 109.93459 * 180.02562 * 5 4 2 7 7 C 1.46502 * 125.05881 * 179.97438 * 6 5 4 8 8 C 1.50705 * 109.46944 * 265.02314 * 7 6 5 9 9 O 1.21278 * 120.00011 * 0.02562 * 8 7 6 10 10 N 1.34776 * 120.00128 * 180.02562 * 8 7 6 11 11 C 1.46493 * 120.00108 * 179.97438 * 10 8 7 12 12 C 1.53004 * 109.47358 * 180.02562 * 11 10 8 13 13 H 1.09006 * 112.84644 * 314.67157 * 12 11 10 14 14 C 1.53778 * 113.61178 * 85.86083 * 12 11 10 15 15 C 1.53959 * 87.01559 * 139.95499 * 14 12 11 16 16 H 1.08996 * 113.66901 * 220.06469 * 15 14 12 17 17 O 1.42903 * 113.61291 * 89.20042 * 15 14 12 18 18 C 1.53773 * 113.61819 * 183.47378 * 12 11 10 19 19 C 1.37685 * 109.87604 * 359.76444 * 6 5 4 20 20 C 1.39083 * 133.51416 * 179.56457 * 19 6 5 21 21 C 1.37787 * 119.77868 * 180.38979 * 20 19 6 22 22 C 1.38793 * 120.66946 * 0.25323 * 21 20 19 23 23 C 1.36663 * 120.52656 * 0.02562 * 22 21 20 24 24 C 1.39595 * 119.75974 * 359.97438 * 23 22 21 25 25 H 0.96701 * 113.99828 * 59.99915 * 1 2 3 26 26 H 1.09002 * 109.47317 * 119.99817 * 2 1 3 27 27 H 1.48494 * 110.00217 * 60.00108 * 3 2 1 28 28 H 1.48499 * 109.99678 * 181.32363 * 3 2 1 29 29 H 1.08000 * 125.03614 * 0.05767 * 5 4 2 30 30 H 1.08994 * 109.47474 * 25.02200 * 7 6 5 31 31 H 1.08998 * 109.46903 * 145.02442 * 7 6 5 32 32 H 0.96999 * 119.99799 * 0.02562 * 10 8 7 33 33 H 1.08998 * 109.47541 * 300.00216 * 11 10 8 34 34 H 1.08998 * 109.47087 * 60.00149 * 11 10 8 35 35 H 1.08998 * 113.61617 * 254.53090 * 14 12 11 36 36 H 1.09001 * 113.61666 * 25.44291 * 14 12 11 37 37 H 0.96699 * 114.00077 * 82.46605 * 17 15 14 38 38 H 1.09007 * 113.61114 * 334.56622 * 18 12 11 39 39 H 1.08997 * 113.61807 * 105.38498 * 18 12 11 40 40 H 1.08002 * 120.11260 * 0.67091 * 20 19 6 41 41 H 1.08001 * 119.67092 * 180.23237 * 21 20 19 42 42 H 1.08001 * 119.73567 * 180.02562 * 22 21 20 43 43 H 1.07992 * 120.12186 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4603 -0.1376 -2.3231 6 7 2.8019 -1.0990 -3.2350 7 6 3.4056 -0.8402 -4.5445 8 6 2.3251 -0.7835 -5.5935 9 8 1.1649 -0.9430 -5.2782 10 7 2.6479 -0.5555 -6.8820 11 6 1.5976 -0.5010 -7.9017 12 6 2.2281 -0.2319 -9.2696 13 1 2.9750 0.5617 -9.2426 14 6 2.7070 -1.5043 -9.9881 15 6 2.1638 -0.8790 -11.2859 16 1 1.6628 -1.5931 -11.9394 17 8 3.1198 -0.0714 -11.9760 18 6 1.1995 -0.0714 -10.4013 19 6 2.4980 -2.3459 -2.7366 20 6 2.6279 -3.6361 -3.2397 21 6 2.2143 -4.7106 -2.4829 22 6 1.6637 -4.5193 -1.2233 23 6 1.5215 -3.2600 -0.7118 24 6 1.9338 -2.1570 -1.4616 25 1 -0.3933 0.4417 -0.7651 26 1 1.7924 -0.5138 0.8900 27 1 1.5616 2.4679 1.2084 28 1 3.5346 1.7702 -0.0322 29 1 2.5967 0.9248 -2.4618 30 1 3.9367 0.1113 -4.5182 31 1 4.1053 -1.6402 -4.7865 32 1 3.5759 -0.4283 -7.1342 33 1 1.0666 -1.4525 -7.9277 34 1 0.8978 0.2990 -7.6601 35 1 3.7899 -1.6280 -9.9819 36 1 2.1752 -2.4051 -9.6818 37 1 3.7292 -0.5737 -12.5340 38 1 0.2548 -0.5798 -10.2080 39 1 1.0660 0.9601 -10.7271 40 1 3.0556 -3.7954 -4.2186 41 1 2.3195 -5.7119 -2.8737 42 1 1.3449 -5.3724 -0.6428 43 1 1.0925 -3.1187 0.2691 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12857620_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:46 Heat of formation + Delta-G solvation = -17.396527 kcal Electronic energy + Delta-G solvation = -26049.223645 eV Core-core repulsion = 22255.716461 eV Total energy + Delta-G solvation = -3793.507185 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -42.46449 -41.02706 -40.13975 -37.97993 -37.51865 -36.58550 -35.03298 -34.00898 -31.48893 -30.11896 -29.77046 -28.13893 -26.91308 -25.64336 -23.87046 -23.45200 -22.53690 -21.76342 -20.76359 -20.52172 -18.82582 -18.40827 -18.04796 -17.70500 -17.27425 -16.90933 -16.60163 -16.32110 -16.27540 -15.90704 -15.74647 -15.31418 -15.21790 -14.84790 -14.61732 -14.46816 -14.36333 -14.01827 -13.91610 -13.60556 -13.57499 -13.35315 -13.01442 -12.59269 -12.43705 -12.32401 -12.09984 -12.04294 -11.99826 -11.66584 -11.37256 -11.13923 -10.82521 -10.40626 -10.23159 -10.19458 -9.01421 -8.51651 -4.99799 0.28754 0.80215 1.40173 1.41425 1.43906 1.69323 1.74588 2.04643 2.14167 2.91413 3.11985 3.32295 3.40806 3.49953 3.51639 3.59606 3.68313 3.76527 3.78041 3.83000 3.87031 4.09545 4.11843 4.29937 4.31907 4.38006 4.51249 4.54837 4.59067 4.65587 4.69168 4.72041 4.80439 4.85461 4.91273 4.98424 4.99514 5.12828 5.26074 5.29575 5.65275 5.81695 5.87245 5.90890 6.16665 6.32708 6.37979 6.52253 6.79689 7.02063 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.198 4.198 5 C 0.069 3.931 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.490 3.510 9 O -0.514 6.514 10 N -0.727 5.727 11 C 0.129 3.871 12 C -0.117 4.117 13 H 0.101 0.899 14 C -0.168 4.168 15 C 0.077 3.923 16 H 0.071 0.929 17 O -0.552 6.552 18 C -0.124 4.124 19 C 0.109 3.891 20 C -0.128 4.128 21 C -0.097 4.097 22 C -0.146 4.146 23 C -0.066 4.066 24 C -0.087 4.087 25 H 0.377 0.623 26 H 0.110 0.890 27 H -0.254 1.254 28 H -0.256 1.256 29 H 0.171 0.829 30 H 0.123 0.877 31 H 0.117 0.883 32 H 0.402 0.598 33 H 0.070 0.930 34 H 0.071 0.929 35 H 0.074 0.926 36 H 0.091 0.909 37 H 0.383 0.617 38 H 0.098 0.902 39 H 0.081 0.919 40 H 0.114 0.886 41 H 0.125 0.875 42 H 0.123 0.877 43 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.145 0.832 -6.303 7.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.584 3.416 4 C -0.206 4.206 5 C -0.056 4.056 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.273 3.727 9 O -0.388 6.388 10 N -0.380 5.380 11 C 0.005 3.995 12 C -0.136 4.136 13 H 0.119 0.881 14 C -0.206 4.206 15 C 0.018 3.982 16 H 0.088 0.912 17 O -0.358 6.358 18 C -0.162 4.162 19 C 0.004 3.996 20 C -0.148 4.148 21 C -0.116 4.116 22 C -0.165 4.165 23 C -0.084 4.084 24 C -0.091 4.091 25 H 0.225 0.775 26 H 0.127 0.873 27 H -0.179 1.179 28 H -0.180 1.180 29 H 0.188 0.812 30 H 0.141 0.859 31 H 0.135 0.865 32 H 0.236 0.764 33 H 0.089 0.911 34 H 0.090 0.910 35 H 0.093 0.907 36 H 0.109 0.891 37 H 0.231 0.769 38 H 0.117 0.883 39 H 0.100 0.900 40 H 0.132 0.868 41 H 0.143 0.857 42 H 0.141 0.859 43 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 3.676 1.573 -5.061 6.449 hybrid contribution 0.894 -1.034 -0.485 1.450 sum 4.570 0.539 -5.546 7.206 Atomic orbital electron populations 1.86489 1.17434 1.81832 1.48967 1.24331 0.84782 1.08745 0.96211 0.95233 0.80645 0.77884 0.87836 1.20645 1.09708 0.92399 0.97811 1.21510 1.01211 0.93786 0.89085 1.43200 1.53927 1.04604 1.13209 1.21586 0.94603 1.05952 0.81350 1.20993 0.90786 0.77367 0.83525 1.90816 1.19906 1.47271 1.80777 1.45945 1.11234 1.73854 1.07000 1.21434 0.89978 1.02387 0.85662 1.22748 0.99318 0.99037 0.92496 0.88106 1.23780 1.01995 0.97481 0.97314 1.22708 0.90664 0.92970 0.91884 0.91158 1.86462 1.48069 1.36992 1.64240 1.23018 0.96968 1.02165 0.94077 1.18164 1.01417 0.85851 0.94157 1.19949 1.05334 0.89308 1.00239 1.20820 0.98428 0.97929 0.94453 1.20670 1.02445 0.96938 0.96443 1.20309 0.97916 0.90954 0.99253 1.18949 1.03076 0.92831 0.94229 0.77545 0.87263 1.17884 1.18046 0.81208 0.85929 0.86532 0.76374 0.91141 0.91024 0.90711 0.89086 0.76887 0.88324 0.89982 0.86781 0.85747 0.85941 0.85974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.39 12.88 -35.23 -0.45 -1.85 16 2 C -0.03 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.20 30.75 -169.99 -5.23 -5.43 16 4 C -0.20 -0.53 5.57 -102.71 -0.57 -1.10 16 5 C 0.07 0.06 9.89 -16.73 -0.17 -0.10 16 6 N -0.47 -0.65 2.27 -115.71 -0.26 -0.92 16 7 C 0.09 -0.22 6.48 -5.19 -0.03 -0.25 16 8 C 0.49 0.00 7.90 -10.98 -0.09 -0.09 16 9 O -0.51 -2.62 16.43 5.56 0.09 -2.53 16 10 N -0.73 1.90 5.56 -60.30 -0.33 1.57 16 11 C 0.13 -0.22 5.50 -4.04 -0.02 -0.24 16 12 C -0.12 0.32 3.68 -89.81 -0.33 -0.01 16 13 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 14 C -0.17 0.52 7.48 -25.83 -0.19 0.33 16 15 C 0.08 -0.17 5.28 -25.83 -0.14 -0.30 16 16 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 17 O -0.55 0.56 13.59 -35.23 -0.48 0.09 16 18 C -0.12 0.26 7.47 -25.93 -0.19 0.07 16 19 C 0.11 0.40 6.81 -83.99 -0.57 -0.17 16 20 C -0.13 -0.36 10.00 -39.43 -0.39 -0.75 16 21 C -0.10 -0.24 10.01 -39.54 -0.40 -0.64 16 22 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 23 C -0.07 -0.27 10.05 -39.64 -0.40 -0.67 16 24 C -0.09 -0.40 6.35 -105.14 -0.67 -1.06 16 25 H 0.38 -0.34 8.70 45.56 0.40 0.06 16 26 H 0.11 0.24 7.96 -51.93 -0.41 -0.17 16 27 H -0.25 -0.75 7.11 56.52 0.40 -0.34 16 28 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 29 H 0.17 -0.46 6.35 -52.49 -0.33 -0.79 16 30 H 0.12 -0.69 8.12 -51.93 -0.42 -1.12 16 31 H 0.12 -0.51 8.14 -51.93 -0.42 -0.93 16 32 H 0.40 -2.19 8.47 -40.82 -0.35 -2.53 16 33 H 0.07 -0.04 7.87 -51.93 -0.41 -0.45 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 35 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.09 -0.28 7.92 -51.93 -0.41 -0.70 16 37 H 0.38 -1.88 9.12 45.56 0.42 -1.46 16 38 H 0.10 -0.29 8.10 -51.93 -0.42 -0.71 16 39 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.11 0.09 8.06 -52.49 -0.42 -0.33 16 41 H 0.12 0.03 8.06 -52.49 -0.42 -0.40 16 42 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 43 H 0.12 0.39 8.06 -52.49 -0.42 -0.03 16 LS Contribution 364.88 15.07 5.50 5.50 Total: 0.00 -11.51 364.88 -10.99 -22.49 By element: Atomic # 1 Polarization: -7.80 SS G_CDS: -5.37 Total: -13.17 kcal Atomic # 6 Polarization: -1.31 SS G_CDS: -4.45 Total: -5.76 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -0.60 Total: 0.65 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.84 Total: -4.29 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.23 Total: -5.43 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -11.51 -10.99 -22.49 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.097 kcal (2) G-P(sol) polarization free energy of solvation -11.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.410 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.494 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds