Wall clock time and date at job start Tue Mar 9 2021 13:10:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17393 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 H 1.08994 * 109.47104 * 342.44220 * 3 2 1 5 5 C 1.53001 * 109.47339 * 102.44347 * 3 2 1 6 6 C 1.52998 * 109.47229 * 179.97438 * 5 3 2 7 7 C 1.52995 * 109.47152 * 299.99860 * 6 5 3 8 8 H 1.09002 * 109.47452 * 300.00219 * 7 6 5 9 9 N 1.46500 * 109.47327 * 180.02562 * 7 6 5 10 10 C 1.34773 * 120.00431 * 155.00306 * 9 7 6 11 11 O 1.21623 * 119.99874 * 359.97438 * 10 9 7 12 12 C 1.47301 * 120.00070 * 179.72645 * 10 9 7 13 13 C 1.39819 * 120.13595 * 359.97438 * 12 10 9 14 14 C 1.37579 * 119.96462 * 179.67354 * 13 12 10 15 15 C 1.50695 * 119.88480 * 180.32263 * 14 13 12 16 16 O 1.42908 * 109.47324 * 105.30184 * 15 14 13 17 17 Si 1.86304 * 109.47078 * 345.30531 * 15 14 13 18 18 C 1.39153 * 120.23879 * 0.62933 * 14 13 12 19 19 O 1.35710 * 119.86223 * 179.69214 * 18 14 13 20 20 C 1.42899 * 116.99992 * 179.97438 * 19 18 14 21 21 C 1.38729 * 120.27244 * 359.67170 * 18 14 13 22 22 C 1.38402 * 120.03155 * 0.02562 * 21 18 14 23 23 O 1.35654 * 120.12060 * 180.02562 * 22 21 18 24 24 C 1.42906 * 117.00011 * 359.97438 * 23 22 21 25 25 C 1.52999 * 109.47259 * 60.00145 * 7 6 5 26 26 C 1.52999 * 109.46876 * 222.44497 * 3 2 1 27 27 H 4.18732 * 15.03874 * 0.02562 * 4 2 1 28 28 H 1.09001 * 109.46721 * 59.99364 * 5 3 2 29 29 H 1.08997 * 109.47038 * 300.00453 * 5 3 2 30 30 H 1.08999 * 109.46636 * 179.97438 * 6 5 3 31 31 H 1.08994 * 109.46992 * 60.00009 * 6 5 3 32 32 H 0.97000 * 119.99456 * 334.99869 * 9 7 6 33 33 H 1.08004 * 120.01363 * 0.02562 * 13 12 10 34 34 H 1.08996 * 109.47770 * 225.30570 * 15 14 13 35 35 H 0.96698 * 113.99951 * 300.01024 * 16 15 14 36 36 H 1.48508 * 109.99690 * 58.67874 * 17 15 14 37 37 H 1.48496 * 110.00306 * 179.97438 * 17 15 14 38 38 H 1.09004 * 109.46641 * 60.00262 * 20 19 18 39 39 H 1.09000 * 109.47604 * 180.02562 * 20 19 18 40 40 H 1.09001 * 109.46977 * 300.00569 * 20 19 18 41 41 H 1.07993 * 119.98601 * 180.02562 * 21 18 14 42 42 H 1.08992 * 109.46818 * 180.02562 * 24 23 22 43 43 H 1.08992 * 109.46993 * 300.00244 * 24 23 22 44 44 H 1.08997 * 109.46567 * 60.00145 * 24 23 22 45 45 H 1.09008 * 109.47252 * 59.99831 * 25 7 6 46 46 H 1.08995 * 109.47658 * 180.02562 * 25 7 6 47 47 H 1.09008 * 109.46860 * 299.99705 * 26 3 2 48 48 H 1.08999 * 109.47724 * 60.00241 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0097 -0.9789 0.3100 5 6 3.1559 0.3117 -1.4086 6 6 4.6859 0.3130 -1.4084 7 6 5.1949 1.3781 -0.4351 8 1 4.8307 2.3575 -0.7452 9 7 6.6599 1.3798 -0.4354 10 6 7.3326 2.4940 -0.0856 11 8 6.7234 3.4983 0.2298 12 6 8.8056 2.4938 -0.0801 13 6 9.5087 1.3391 -0.4367 14 6 10.8845 1.3448 -0.4368 15 6 11.6405 0.1015 -0.8285 16 8 12.1854 0.2682 -2.1391 17 14 10.4829 -1.3582 -0.8184 18 6 11.5805 2.4927 -0.0704 19 8 12.9376 2.4880 -0.0672 20 6 13.5897 3.6996 0.3187 21 6 10.8929 3.6420 0.2912 22 6 9.5089 3.6507 0.2893 23 8 8.8346 4.7737 0.6421 24 6 9.6170 5.9130 1.0055 25 6 4.6850 1.0671 0.9735 26 6 3.1554 1.0654 0.9735 27 1 -1.0500 -0.0011 -0.0002 28 1 2.7920 1.2913 -1.7186 29 1 2.7929 -0.4467 -2.1021 30 1 5.0490 0.5342 -2.4121 31 1 5.0500 -0.6664 -1.0983 32 1 7.1457 0.5789 -0.6873 33 1 8.9721 0.4448 -0.7174 34 1 12.4490 -0.0712 -0.1182 35 1 11.5213 0.4261 -2.8239 36 1 9.3588 -1.1214 -1.7596 37 1 11.2162 -2.5907 -1.2036 38 1 13.2953 3.9629 1.3346 39 1 14.6699 3.5599 0.2777 40 1 13.3011 4.5003 -0.3623 41 1 11.4377 4.5304 0.5744 42 1 8.9560 6.7397 1.2651 43 1 10.2427 5.6654 1.8630 44 1 10.2491 6.2023 0.1660 45 1 5.0492 0.0876 1.2837 46 1 5.0472 1.8260 1.6669 47 1 2.7916 2.0450 0.6635 48 1 2.7923 0.8438 1.9771 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_12297780.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:28 Heat of formation + Delta-G solvation = -60.001042 kcal Electronic energy + Delta-G solvation = -30937.441114 eV Core-core repulsion = 26733.292559 eV Total energy + Delta-G solvation = -4204.148555 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.166 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.06017 -40.81892 -40.02889 -39.12039 -38.45813 -37.00317 -35.68887 -33.50414 -32.22738 -31.85211 -31.81325 -29.81634 -29.07794 -28.16862 -26.12712 -24.97730 -23.77219 -23.72793 -22.57165 -21.36356 -21.07143 -20.03260 -19.02073 -18.77124 -18.19388 -17.96965 -17.21840 -17.09577 -16.63362 -16.54309 -16.32270 -16.07843 -15.81217 -15.74064 -15.69337 -15.44945 -15.22568 -15.13586 -14.56513 -14.26366 -14.15286 -13.95724 -13.81798 -13.53742 -13.24886 -13.22245 -12.76526 -12.70485 -12.60947 -12.54756 -12.28125 -12.19862 -12.15636 -11.85196 -11.80698 -11.67469 -11.57483 -10.93165 -10.84578 -10.62576 -10.55161 -9.96086 -9.88825 -9.12458 -5.03385 -0.18532 0.12479 1.22756 1.45750 1.86140 1.92170 1.97285 2.00160 2.05851 2.15005 2.19697 2.72497 3.39338 3.40952 3.44061 3.58469 3.66687 3.73371 3.75207 3.82583 3.99009 4.05436 4.07496 4.12098 4.13622 4.14873 4.17181 4.23794 4.25616 4.40496 4.42894 4.44497 4.45871 4.52037 4.58331 4.70227 4.72519 4.79469 4.91671 5.00735 5.03812 5.09091 5.10629 5.16294 5.23986 5.31195 5.32325 5.40675 5.60583 6.01426 6.30013 6.45418 6.61166 6.78566 7.41853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.185 4.185 3 C 0.019 3.981 4 H 0.093 0.907 5 C -0.106 4.106 6 C -0.128 4.128 7 C 0.146 3.854 8 H 0.091 0.909 9 N -0.730 5.730 10 C 0.567 3.433 11 O -0.517 6.517 12 C -0.209 4.209 13 C -0.013 4.013 14 C -0.195 4.195 15 C -0.058 4.058 16 O -0.524 6.524 17 Si 0.681 3.319 18 C 0.223 3.777 19 O -0.296 6.296 20 C 0.021 3.979 21 C -0.314 4.314 22 C 0.234 3.766 23 O -0.274 6.274 24 C 0.018 3.982 25 C -0.129 4.129 26 C -0.108 4.108 27 H 0.217 0.783 28 H 0.071 0.929 29 H 0.073 0.927 30 H 0.074 0.926 31 H 0.072 0.928 32 H 0.395 0.605 33 H 0.140 0.860 34 H 0.118 0.882 35 H 0.372 0.628 36 H -0.257 1.257 37 H -0.253 1.253 38 H 0.059 0.941 39 H 0.107 0.893 40 H 0.059 0.941 41 H 0.144 0.856 42 H 0.107 0.893 43 H 0.058 0.942 44 H 0.057 0.943 45 H 0.068 0.932 46 H 0.074 0.926 47 H 0.070 0.930 48 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.913 -0.714 1.459 2.510 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.185 4.185 3 C 0.002 3.998 4 H 0.111 0.889 5 C -0.144 4.144 6 C -0.166 4.166 7 C 0.042 3.958 8 H 0.109 0.891 9 N -0.383 5.383 10 C 0.354 3.646 11 O -0.393 6.393 12 C -0.213 4.213 13 C -0.031 4.031 14 C -0.197 4.197 15 C -0.167 4.167 16 O -0.330 6.330 17 Si 0.582 3.418 18 C 0.175 3.825 19 O -0.207 6.207 20 C -0.073 4.073 21 C -0.334 4.334 22 C 0.185 3.815 23 O -0.184 6.184 24 C -0.077 4.077 25 C -0.168 4.168 26 C -0.146 4.146 27 H 0.233 0.767 28 H 0.090 0.910 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.230 0.770 33 H 0.157 0.843 34 H 0.136 0.864 35 H 0.219 0.781 36 H -0.182 1.182 37 H -0.178 1.178 38 H 0.078 0.922 39 H 0.125 0.875 40 H 0.077 0.923 41 H 0.162 0.838 42 H 0.125 0.875 43 H 0.076 0.924 44 H 0.076 0.924 45 H 0.087 0.913 46 H 0.093 0.907 47 H 0.088 0.912 48 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 1.613 -0.796 1.510 2.348 hybrid contribution 0.456 0.669 -1.004 1.290 sum 2.068 -0.126 0.506 2.133 Atomic orbital electron populations 1.24967 0.96004 1.00827 1.00415 1.23018 0.94253 1.00519 1.00677 1.18380 0.84421 1.00558 0.96490 0.88888 1.21489 0.94279 1.03040 0.95622 1.21830 0.95916 0.99084 0.99725 1.21005 0.78827 1.00595 0.95384 0.89057 1.45972 1.07153 1.14445 1.70711 1.17798 0.86439 0.83172 0.77146 1.90850 1.69290 1.32393 1.46760 1.19060 0.93293 0.93369 1.15552 1.20890 0.92593 0.96385 0.93281 1.19361 0.92769 0.96080 1.11441 1.24793 1.04751 1.00551 0.86650 1.86656 1.36593 1.93380 1.16349 0.95250 0.78583 0.77278 0.90694 1.18714 0.82689 0.92119 0.88968 1.86159 1.15755 1.37148 1.81598 1.23214 0.98545 0.85612 0.99963 1.21304 0.93819 1.00672 1.17600 1.18733 0.89138 0.86079 0.87568 1.86403 1.34353 1.18578 1.79036 1.23239 0.97374 0.87163 0.99876 1.21932 0.95053 1.02668 0.97102 1.21509 0.94941 0.98862 0.99250 0.76664 0.91044 0.90850 0.90752 0.90932 0.77004 0.84274 0.86390 0.78060 1.18207 1.17782 0.92196 0.87508 0.92287 0.83798 0.87479 0.92358 0.92442 0.91319 0.90703 0.91159 0.91055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.28 19.25 29.55 0.57 0.28 16 2 C -0.18 -0.34 12.56 -37.12 -0.47 -0.80 16 3 C 0.02 0.00 2.57 -93.40 -0.24 -0.24 16 4 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 5 C -0.11 0.11 5.16 -26.73 -0.14 -0.03 16 6 C -0.13 0.24 5.39 -26.73 -0.14 0.10 16 7 C 0.15 0.00 2.45 -67.93 -0.17 -0.17 16 8 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 9 N -0.73 -0.07 5.03 -54.92 -0.28 -0.34 16 10 C 0.57 1.84 7.72 -12.58 -0.10 1.74 16 11 O -0.52 -3.60 14.81 -16.67 -0.25 -3.85 16 12 C -0.21 -0.43 5.89 -104.83 -0.62 -1.05 16 13 C -0.01 0.00 8.14 -39.23 -0.32 -0.32 16 14 C -0.20 -0.07 5.27 -104.53 -0.55 -0.62 16 15 C -0.06 0.01 2.37 36.00 0.09 0.09 16 16 O -0.52 -0.75 12.88 -35.23 -0.45 -1.20 16 17 Si 0.68 -1.25 30.23 -169.99 -5.14 -6.38 16 18 C 0.22 0.25 6.67 -39.06 -0.26 -0.01 16 19 O -0.30 -0.32 9.80 -18.84 -0.18 -0.50 16 20 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 21 C -0.31 -0.22 8.01 -39.34 -0.31 -0.53 16 22 C 0.23 0.59 6.70 -38.73 -0.26 0.33 16 23 O -0.27 -0.94 8.56 -40.58 -0.35 -1.29 16 24 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 25 C -0.13 0.02 5.49 -26.75 -0.15 -0.13 16 26 C -0.11 0.00 5.16 -26.75 -0.14 -0.14 16 27 H 0.22 -0.33 7.80 -54.09 -0.42 -0.75 16 28 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 32 H 0.40 -0.96 6.62 -40.82 -0.27 -1.23 16 33 H 0.14 -0.37 3.16 -52.48 -0.17 -0.53 16 34 H 0.12 0.00 7.82 -51.93 -0.41 -0.41 16 35 H 0.37 -0.61 8.70 45.56 0.40 -0.22 16 36 H -0.26 0.35 6.69 56.52 0.38 0.73 16 37 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 38 H 0.06 -0.20 7.65 -51.93 -0.40 -0.60 16 39 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 40 H 0.06 -0.18 7.65 -51.93 -0.40 -0.57 16 41 H 0.14 -0.21 4.50 -52.49 -0.24 -0.45 16 42 H 0.11 -0.20 8.14 -51.93 -0.42 -0.63 16 43 H 0.06 -0.14 7.66 -51.93 -0.40 -0.53 16 44 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 45 H 0.07 -0.09 8.14 -51.92 -0.42 -0.51 16 46 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 47 H 0.07 0.06 8.14 -51.92 -0.42 -0.36 16 48 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 389.84 15.07 5.87 5.87 Total: 0.00 -9.30 389.84 -8.95 -18.26 By element: Atomic # 1 Polarization: -4.03 SS G_CDS: -6.96 Total: -10.99 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -1.22 Total: 0.42 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -0.28 Total: -0.34 kcal Atomic # 8 Polarization: -5.61 SS G_CDS: -1.23 Total: -6.84 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.14 Total: -6.38 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -9.30 -8.95 -18.26 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_12297780.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.744 kcal (2) G-P(sol) polarization free energy of solvation -9.305 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.952 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.257 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.001 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds