Wall clock time and date at job start Tue Mar 9 2021 13:11:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17398 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 H 1.09001 * 109.47194 * 180.44099 * 3 2 1 5 5 C 1.52997 * 109.47240 * 300.44680 * 3 2 1 6 6 C 1.53002 * 109.46817 * 180.02562 * 5 3 2 7 7 C 1.52996 * 109.46972 * 299.99733 * 6 5 3 8 8 H 1.09000 * 109.47380 * 299.99696 * 7 6 5 9 9 N 1.46510 * 109.46858 * 180.02562 * 7 6 5 10 10 C 1.34773 * 119.99925 * 155.00046 * 9 7 6 11 11 O 1.21579 * 119.99903 * 359.97438 * 10 9 7 12 12 C 1.47697 * 120.00298 * 179.97438 * 10 9 7 13 13 C 1.39806 * 120.15659 * 180.02562 * 12 10 9 14 14 F 1.35099 * 120.08230 * 359.97438 * 13 12 10 15 15 C 1.38314 * 119.82699 * 180.02562 * 13 12 10 16 16 C 1.38176 * 120.14789 * 359.97438 * 15 13 12 17 17 C 1.50703 * 119.84353 * 179.97438 * 16 15 13 18 18 O 1.42903 * 109.46865 * 15.00383 * 17 16 15 19 19 Si 1.86301 * 109.47221 * 134.99885 * 17 16 15 20 20 C 1.38657 * 120.31644 * 359.97438 * 16 15 13 21 21 F 1.35101 * 119.91488 * 180.02562 * 20 16 15 22 22 C 1.38062 * 120.16398 * 359.72663 * 20 16 15 23 23 C 1.52997 * 109.47131 * 60.00459 * 7 6 5 24 24 C 1.52999 * 109.46991 * 299.99311 * 23 7 6 25 25 H 4.18748 * 15.03845 * 0.02562 * 4 2 1 26 26 H 1.09002 * 109.47153 * 299.99895 * 5 3 2 27 27 H 1.08996 * 109.46952 * 60.00066 * 5 3 2 28 28 H 1.08996 * 109.47407 * 60.00219 * 6 5 3 29 29 H 1.09000 * 109.46986 * 179.97438 * 6 5 3 30 30 H 0.96994 * 119.99768 * 334.99990 * 9 7 6 31 31 H 1.08008 * 119.92236 * 180.02562 * 15 13 12 32 32 H 1.08997 * 109.47203 * 254.99937 * 17 16 15 33 33 H 0.96696 * 114.00262 * 59.99367 * 18 17 16 34 34 H 1.48502 * 109.99773 * 58.68280 * 19 17 16 35 35 H 1.48502 * 109.99963 * 180.02562 * 19 17 16 36 36 H 1.08006 * 120.07845 * 180.27595 * 22 20 16 37 37 H 1.09002 * 109.47153 * 179.97438 * 23 7 6 38 38 H 1.08993 * 109.47194 * 60.00154 * 23 7 6 39 39 H 1.08993 * 109.47839 * 300.00447 * 24 23 7 40 40 H 1.09000 * 109.47160 * 180.02562 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0089 1.0285 0.0079 5 6 3.1564 -0.7301 1.2435 6 6 4.6864 -0.7288 1.2438 7 6 5.1971 -1.4397 -0.0110 8 1 4.8347 -2.4676 -0.0192 9 7 6.6622 -1.4390 -0.0105 10 6 7.3368 -2.3893 -0.6874 11 8 6.7295 -3.2474 -1.2981 12 6 8.8137 -2.3883 -0.6873 13 6 9.5168 -3.3723 -1.3889 14 9 8.8468 -4.3281 -2.0691 15 6 10.8999 -3.3652 -1.3838 16 6 11.5863 -2.3885 -0.6880 17 6 13.0933 -2.3876 -0.6867 18 8 13.5710 -3.2452 -1.7251 19 14 13.7136 -0.6552 -0.9776 20 6 10.8952 -1.4091 0.0089 21 9 11.5745 -0.4576 0.6860 22 6 9.5146 -1.4002 0.0075 23 6 4.6868 -0.7090 -1.2546 24 6 3.1568 -0.7103 -1.2549 25 1 -1.0501 -0.0010 0.0005 26 1 2.7928 -0.2233 2.1375 27 1 2.7935 -1.7578 1.2355 28 1 5.0489 0.2991 1.2520 29 1 5.0500 -1.2490 2.1299 30 1 7.1466 -0.7545 0.4770 31 1 11.4445 -4.1244 -1.9256 32 1 13.4560 -2.7464 0.2765 33 1 13.2863 -2.9854 -2.6120 34 1 13.1976 0.2530 0.0780 35 1 15.1986 -0.6409 -0.9791 36 1 8.9776 -0.6340 0.5472 37 1 5.0510 -1.2152 -2.1486 38 1 5.0493 0.3189 -1.2464 39 1 2.7942 -1.7381 -1.2631 40 1 2.7932 -0.1901 -2.1411 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_12360598.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:02 Heat of formation + Delta-G solvation = -71.416533 kcal Electronic energy + Delta-G solvation = -26680.833074 eV Core-core repulsion = 22485.721176 eV Total energy + Delta-G solvation = -4195.111897 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.117 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -50.48595 -49.95972 -41.49290 -40.32517 -39.29599 -37.75511 -35.94461 -33.87609 -32.87689 -31.95279 -31.48366 -30.13057 -27.89983 -24.71506 -24.28961 -23.87563 -23.26003 -21.70702 -21.34712 -19.61997 -19.14315 -19.06508 -18.56938 -17.93796 -17.52464 -17.27359 -17.05629 -16.66712 -16.17908 -16.07335 -15.88345 -15.78425 -15.77766 -15.47790 -15.26577 -15.11572 -14.51734 -14.16255 -14.11393 -13.97992 -13.74403 -13.35380 -13.29137 -12.99895 -12.82849 -12.56731 -12.38652 -12.26953 -11.96467 -11.69938 -11.53588 -11.08181 -11.05024 -10.96412 -10.90236 -10.33003 -10.17731 -9.74546 -5.13154 -0.80283 -0.34987 1.04323 1.48220 1.56200 1.83580 1.91482 1.91764 1.95262 2.30146 2.73673 2.78222 3.02452 3.08916 3.31268 3.36224 3.45571 3.57051 3.64073 3.73369 3.98681 4.04126 4.07853 4.13449 4.24274 4.29141 4.32216 4.33079 4.35222 4.55667 4.59711 4.62312 4.67831 4.69728 4.89131 4.95323 5.00975 5.06324 5.15316 5.20646 5.27918 5.35210 5.39209 6.26488 6.28219 6.73230 7.03228 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.187 4.187 3 C 0.020 3.980 4 H 0.093 0.907 5 C -0.107 4.107 6 C -0.127 4.127 7 C 0.144 3.856 8 H 0.094 0.906 9 N -0.721 5.721 10 C 0.561 3.439 11 O -0.513 6.513 12 C -0.151 4.151 13 C 0.162 3.838 14 F -0.105 7.105 15 C -0.125 4.125 16 C -0.091 4.091 17 C -0.072 4.072 18 O -0.535 6.535 19 Si 0.688 3.312 20 C 0.074 3.926 21 F -0.118 7.118 22 C -0.085 4.085 23 C -0.129 4.129 24 C -0.108 4.108 25 H 0.217 0.783 26 H 0.074 0.926 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.075 0.925 30 H 0.399 0.601 31 H 0.163 0.837 32 H 0.130 0.870 33 H 0.383 0.617 34 H -0.226 1.226 35 H -0.256 1.256 36 H 0.151 0.849 37 H 0.074 0.926 38 H 0.068 0.932 39 H 0.071 0.929 40 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.516 4.371 0.402 4.420 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C -0.187 4.187 3 C 0.002 3.998 4 H 0.111 0.889 5 C -0.145 4.145 6 C -0.165 4.165 7 C 0.040 3.960 8 H 0.112 0.888 9 N -0.373 5.373 10 C 0.347 3.653 11 O -0.389 6.389 12 C -0.155 4.155 13 C 0.141 3.859 14 F -0.083 7.083 15 C -0.144 4.144 16 C -0.093 4.093 17 C -0.181 4.181 18 O -0.340 6.340 19 Si 0.586 3.414 20 C 0.055 3.945 21 F -0.097 7.097 22 C -0.104 4.104 23 C -0.168 4.168 24 C -0.146 4.146 25 H 0.234 0.766 26 H 0.093 0.907 27 H 0.090 0.910 28 H 0.091 0.909 29 H 0.094 0.906 30 H 0.235 0.765 31 H 0.181 0.819 32 H 0.147 0.853 33 H 0.231 0.769 34 H -0.149 1.149 35 H -0.181 1.181 36 H 0.169 0.831 37 H 0.093 0.907 38 H 0.087 0.913 39 H 0.090 0.910 40 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 0.806 4.096 0.790 4.249 hybrid contribution -0.205 -0.166 0.698 0.747 sum 0.601 3.930 1.488 4.245 Atomic orbital electron populations 1.24987 0.96017 1.00700 1.00229 1.22981 0.94223 1.00649 1.00822 1.18370 0.84515 1.00873 0.96058 0.88904 1.21494 0.94112 1.01565 0.97300 1.21826 0.96068 1.01328 0.97244 1.21104 0.78201 1.01512 0.95177 0.88815 1.45951 1.07548 1.30840 1.52950 1.17840 0.86090 0.81816 0.79586 1.90896 1.69218 1.36670 1.42094 1.19872 0.94227 0.97944 1.03453 1.17631 0.89556 0.86632 0.92083 1.91654 1.80197 1.60325 1.76134 1.20853 0.91496 1.00126 1.01928 1.20445 0.97842 0.93990 0.96992 1.25156 0.90023 1.07989 0.94942 1.86532 1.75478 1.54158 1.17825 0.95143 0.81347 0.75595 0.89295 1.17215 0.89783 0.89568 0.97956 1.91602 1.78520 1.61570 1.77965 1.21107 0.92281 0.98425 0.98615 1.21936 0.95335 1.01071 0.98442 1.21515 0.94669 1.01487 0.96916 0.76613 0.90710 0.90958 0.90857 0.90593 0.76510 0.81928 0.85298 0.76927 1.14933 1.18124 0.83145 0.90716 0.91289 0.91050 0.90932 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.20 19.25 29.55 0.57 0.37 16 2 C -0.19 -0.25 12.56 -37.12 -0.47 -0.71 16 3 C 0.02 -0.02 2.56 -93.40 -0.24 -0.26 16 4 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 5 C -0.11 0.19 5.16 -26.73 -0.14 0.05 16 6 C -0.13 0.37 5.39 -26.73 -0.14 0.23 16 7 C 0.14 -0.17 2.45 -67.93 -0.17 -0.34 16 8 H 0.09 0.09 7.57 -51.93 -0.39 -0.31 16 9 N -0.72 1.10 5.03 -54.79 -0.28 0.82 16 10 C 0.56 0.90 7.73 -12.40 -0.10 0.80 16 11 O -0.51 -2.92 15.00 5.30 0.08 -2.84 16 12 C -0.15 -0.02 5.88 -104.92 -0.62 -0.63 16 13 C 0.16 0.16 7.28 -38.97 -0.28 -0.13 16 14 F -0.11 -0.39 15.55 2.25 0.04 -0.35 16 15 C -0.13 0.15 9.20 -39.58 -0.36 -0.22 16 16 C -0.09 0.14 5.14 -104.49 -0.54 -0.39 16 17 C -0.07 0.13 2.96 36.01 0.11 0.24 16 18 O -0.53 0.94 11.63 -35.23 -0.41 0.53 16 19 Si 0.69 -1.40 30.81 -169.99 -5.24 -6.64 16 20 C 0.07 -0.10 6.65 -39.49 -0.26 -0.36 16 21 F -0.12 0.04 12.80 2.25 0.03 0.07 16 22 C -0.08 0.18 9.51 -39.12 -0.37 -0.19 16 23 C -0.13 0.13 5.50 -26.73 -0.15 -0.01 16 24 C -0.11 0.07 5.16 -26.73 -0.14 -0.06 16 25 H 0.22 -0.41 7.80 -54.09 -0.42 -0.83 16 26 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 27 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 28 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 29 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.40 -1.75 6.63 -40.82 -0.27 -2.02 16 31 H 0.16 -0.39 7.06 -52.48 -0.37 -0.76 16 32 H 0.13 -0.19 7.96 -51.93 -0.41 -0.61 16 33 H 0.38 -2.22 8.42 45.56 0.38 -1.84 16 34 H -0.23 -0.03 5.26 56.52 0.30 0.27 16 35 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 36 H 0.15 -0.75 6.41 -52.48 -0.34 -1.09 16 37 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 39 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 340.71 15.07 5.13 5.13 Total: 0.00 -7.95 340.71 -8.87 -16.82 By element: Atomic # 1 Polarization: -7.01 SS G_CDS: -4.93 Total: -11.94 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -3.30 Total: -1.62 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -0.28 Total: 0.82 kcal Atomic # 8 Polarization: -1.97 SS G_CDS: -0.33 Total: -2.30 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.06 Total: -0.28 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.24 Total: -6.64 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -7.95 -8.87 -16.82 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_12360598.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.594 kcal (2) G-P(sol) polarization free energy of solvation -7.953 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.548 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.869 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.822 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds