Wall clock time and date at job start Tue Mar 9 2021 13:11:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 H 1.09002 * 109.47189 * 304.87436 * 3 2 1 5 5 C 1.52995 * 109.47166 * 64.88057 * 3 2 1 6 6 C 1.53000 * 109.47223 * 179.97438 * 5 3 2 7 7 C 1.53004 * 109.47253 * 299.99574 * 6 5 3 8 8 H 1.08994 * 109.47062 * 300.00266 * 7 6 5 9 9 N 1.46498 * 109.47431 * 179.97438 * 7 6 5 10 10 C 1.34778 * 119.99788 * 85.00114 * 9 7 6 11 11 O 1.21589 * 119.99834 * 0.02562 * 10 9 7 12 12 C 1.47538 * 120.00057 * 180.02562 * 10 9 7 13 13 C 1.40131 * 120.19052 * 180.02562 * 12 10 9 14 14 O 1.35650 * 120.15314 * 359.95577 * 13 12 10 15 15 C 1.42903 * 117.00294 * 180.02562 * 14 13 12 16 16 C 1.38715 * 119.69725 * 179.97438 * 13 12 10 17 17 C 1.38052 * 120.08458 * 359.97438 * 16 13 12 18 18 C 1.38553 * 120.39122 * 0.02562 * 17 16 13 19 19 C 1.50696 * 119.85229 * 179.97438 * 18 17 16 20 20 O 1.42898 * 109.46760 * 120.02287 * 19 18 17 21 21 Si 1.86299 * 109.46978 * 0.02895 * 19 18 17 22 22 C 1.37783 * 120.29898 * 0.02562 * 18 17 16 23 23 C 1.53002 * 109.46807 * 59.99619 * 7 6 5 24 24 C 1.53000 * 109.47370 * 300.00576 * 23 7 6 25 25 H 4.18736 * 15.04040 * 359.97438 * 4 2 1 26 26 H 1.09004 * 109.47105 * 299.99295 * 5 3 2 27 27 H 1.09002 * 109.47574 * 59.99615 * 5 3 2 28 28 H 1.09003 * 109.47442 * 179.97438 * 6 5 3 29 29 H 1.09002 * 109.47150 * 59.99368 * 6 5 3 30 30 H 0.96994 * 120.00244 * 265.00438 * 9 7 6 31 31 H 1.08997 * 109.47017 * 59.99578 * 15 14 13 32 32 H 1.08997 * 109.47296 * 179.97438 * 15 14 13 33 33 H 1.09001 * 109.46893 * 300.00255 * 15 14 13 34 34 H 1.08005 * 119.95347 * 179.72633 * 16 13 12 35 35 H 1.08000 * 119.80547 * 179.97438 * 17 16 13 36 36 H 1.08995 * 109.47558 * 240.02765 * 19 18 17 37 37 H 0.96702 * 114.00063 * 180.02562 * 20 19 18 38 38 H 1.48498 * 110.00416 * 59.99269 * 21 19 18 39 39 H 1.48497 * 110.00286 * 181.31687 * 21 19 18 40 40 H 1.07999 * 120.04733 * 179.97438 * 22 18 17 41 41 H 1.09007 * 109.46805 * 60.00173 * 23 7 6 42 42 H 1.08998 * 109.46974 * 179.97438 * 23 7 6 43 43 H 1.09000 * 109.46788 * 180.02562 * 24 23 7 44 44 H 1.09000 * 109.46981 * 299.99259 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0096 -0.5868 0.8431 5 6 3.1563 -0.6114 -1.3060 6 6 4.6862 -0.6102 -1.3063 7 6 5.1951 0.8276 -1.1840 8 1 4.8311 1.4147 -2.0270 9 7 6.6601 0.8288 -1.1837 10 6 7.3342 0.8265 -2.3507 11 8 6.7265 0.8239 -3.4038 12 6 8.8096 0.8271 -2.3505 13 6 9.5145 0.8253 -3.5616 14 8 8.8436 0.8220 -4.7405 15 6 9.6292 0.8197 -5.9342 16 6 10.9016 0.8264 -3.5494 17 6 11.5831 0.8299 -2.3488 18 6 10.8898 0.8317 -1.1492 19 6 11.6460 0.8350 0.1543 20 8 11.3009 2.0027 0.9022 21 14 13.4769 0.8367 -0.1900 22 6 9.5119 0.8296 -1.1427 23 6 4.6848 1.4398 0.1220 24 6 3.1548 1.4384 0.1223 25 1 -1.0500 0.0000 0.0008 26 1 2.7935 -1.6356 -1.3934 27 1 2.7926 -0.0240 -2.1491 28 1 5.0498 -1.0467 -2.2366 29 1 5.0502 -1.1974 -0.4632 30 1 7.1449 0.8312 -0.3436 31 1 10.2588 -0.0698 -5.9530 32 1 8.9706 0.8167 -6.8027 33 1 10.2576 1.7101 -5.9572 34 1 11.4491 0.8206 -4.4803 35 1 12.6631 0.8304 -2.3445 36 1 11.3850 -0.0543 0.7280 37 1 11.7518 2.0711 1.7549 38 1 13.8456 2.0441 -0.9718 39 1 14.2339 0.8078 1.0872 40 1 8.9756 0.8306 -0.2053 41 1 5.0488 0.8525 0.9652 42 1 5.0476 2.4638 0.2094 43 1 2.7913 1.8750 1.0526 44 1 2.7908 2.0257 -0.7207 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_12496546.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:05 Heat of formation + Delta-G solvation = -26.631130 kcal Electronic energy + Delta-G solvation = -26241.543728 eV Core-core repulsion = 22513.062012 eV Total energy + Delta-G solvation = -3728.481716 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.151 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.71205 -40.53489 -39.14267 -39.00490 -37.33745 -35.68300 -33.63660 -32.52516 -31.92368 -31.83725 -29.86658 -28.53017 -26.15881 -25.41457 -23.82941 -23.74825 -22.31190 -21.33321 -20.93733 -19.39775 -19.00645 -18.64195 -18.04937 -17.71893 -16.89510 -16.75830 -16.27806 -15.99253 -15.80803 -15.78003 -15.66841 -15.27480 -15.12555 -14.77153 -14.45095 -14.09976 -13.97169 -13.88364 -13.82896 -13.45416 -13.23507 -13.02702 -12.67211 -12.53113 -12.37088 -12.24698 -12.15418 -12.01639 -11.83774 -11.78521 -11.57200 -10.92949 -10.84324 -10.72159 -10.49229 -10.16761 -9.89160 -9.21774 -5.04910 -0.19119 0.24355 1.19528 1.51656 1.87927 1.93036 1.97637 2.00465 2.20219 2.26852 2.75641 3.22681 3.39697 3.57495 3.60072 3.67406 3.75551 3.78410 4.02945 4.09423 4.11873 4.18045 4.20797 4.23923 4.25246 4.27620 4.41742 4.44871 4.46433 4.47857 4.61023 4.69760 4.71085 4.73656 4.91817 5.01016 5.06230 5.11375 5.12649 5.16341 5.24566 5.30725 5.32744 5.41077 5.53329 5.62255 6.32411 6.35947 6.63443 6.78901 7.42258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.185 4.185 3 C 0.020 3.980 4 H 0.093 0.907 5 C -0.107 4.107 6 C -0.129 4.129 7 C 0.146 3.854 8 H 0.091 0.909 9 N -0.728 5.728 10 C 0.563 3.437 11 O -0.515 6.515 12 C -0.175 4.175 13 C 0.192 3.808 14 O -0.279 6.279 15 C 0.019 3.981 16 C -0.213 4.213 17 C -0.045 4.045 18 C -0.122 4.122 19 C -0.070 4.070 20 O -0.537 6.537 21 Si 0.678 3.322 22 C -0.018 4.018 23 C -0.127 4.127 24 C -0.106 4.106 25 H 0.217 0.783 26 H 0.071 0.929 27 H 0.070 0.930 28 H 0.074 0.926 29 H 0.067 0.933 30 H 0.397 0.603 31 H 0.059 0.941 32 H 0.105 0.895 33 H 0.058 0.942 34 H 0.142 0.858 35 H 0.134 0.866 36 H 0.078 0.922 37 H 0.381 0.619 38 H -0.254 1.254 39 H -0.260 1.260 40 H 0.134 0.866 41 H 0.071 0.929 42 H 0.075 0.925 43 H 0.073 0.927 44 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.901 -2.400 2.240 5.098 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.185 4.185 3 C 0.002 3.998 4 H 0.111 0.889 5 C -0.145 4.145 6 C -0.167 4.167 7 C 0.042 3.958 8 H 0.109 0.891 9 N -0.381 5.381 10 C 0.350 3.650 11 O -0.391 6.391 12 C -0.179 4.179 13 C 0.143 3.857 14 O -0.189 6.189 15 C -0.076 4.076 16 C -0.232 4.232 17 C -0.063 4.063 18 C -0.123 4.123 19 C -0.179 4.179 20 O -0.344 6.344 21 Si 0.579 3.421 22 C -0.037 4.037 23 C -0.165 4.165 24 C -0.144 4.144 25 H 0.234 0.766 26 H 0.089 0.911 27 H 0.089 0.911 28 H 0.092 0.908 29 H 0.085 0.915 30 H 0.233 0.767 31 H 0.077 0.923 32 H 0.123 0.877 33 H 0.076 0.924 34 H 0.159 0.841 35 H 0.151 0.849 36 H 0.096 0.904 37 H 0.229 0.771 38 H -0.179 1.179 39 H -0.185 1.185 40 H 0.152 0.848 41 H 0.090 0.910 42 H 0.093 0.907 43 H 0.092 0.908 44 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 3.632 -1.865 0.983 4.199 hybrid contribution 0.024 0.593 1.403 1.523 sum 3.656 -1.271 2.386 4.547 Atomic orbital electron populations 1.24969 0.95998 1.00510 1.00716 1.23017 0.94249 1.00651 1.00563 1.18377 0.84436 0.97575 0.99451 0.88940 1.21514 0.94892 1.01576 0.96567 1.21936 0.95091 0.96629 1.03069 1.21005 0.78877 0.96824 0.99116 0.89090 1.45971 1.07111 1.76539 1.08435 1.17937 0.86571 0.76545 0.83938 1.90843 1.69349 1.48173 1.30688 1.19329 0.93291 1.13748 0.91500 1.19080 0.90097 0.90612 0.85888 1.86380 1.34473 1.86219 1.11851 1.23232 0.97253 1.01448 0.85707 1.21202 0.92542 1.09823 0.99636 1.20918 0.99552 0.94481 0.91342 1.19013 0.93530 1.06499 0.93227 1.24691 1.10324 0.90204 0.92715 1.86585 1.69328 1.43336 1.35171 0.95148 0.74186 0.88901 0.83828 1.20933 0.93454 0.93102 0.96224 1.21822 0.95857 1.01825 0.96945 1.21491 0.94312 0.95394 1.03236 0.76642 0.91074 0.91118 0.90774 0.91464 0.76740 0.92251 0.87706 0.92365 0.84057 0.84853 0.90445 0.77139 1.17884 1.18510 0.84816 0.90998 0.90676 0.90836 0.91029 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.33 19.25 29.55 0.57 0.23 16 2 C -0.18 -0.39 12.56 -37.12 -0.47 -0.86 16 3 C 0.02 0.00 2.57 -93.41 -0.24 -0.24 16 4 H 0.09 -0.06 8.14 -51.93 -0.42 -0.49 16 5 C -0.11 -0.05 5.16 -26.73 -0.14 -0.19 16 6 C -0.13 -0.06 5.49 -26.73 -0.15 -0.20 16 7 C 0.15 0.08 2.45 -67.93 -0.17 -0.08 16 8 H 0.09 0.25 7.58 -51.93 -0.39 -0.15 16 9 N -0.73 -0.55 5.03 -54.85 -0.28 -0.83 16 10 C 0.56 2.25 7.73 -12.47 -0.10 2.16 16 11 O -0.51 -3.95 14.82 -16.59 -0.25 -4.20 16 12 C -0.17 -0.49 5.89 -104.84 -0.62 -1.11 16 13 C 0.19 0.56 6.70 -38.70 -0.26 0.30 16 14 O -0.28 -1.09 8.57 -40.53 -0.35 -1.44 16 15 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 16 C -0.21 -0.07 9.03 -39.47 -0.36 -0.43 16 17 C -0.05 0.01 8.66 -39.53 -0.34 -0.33 16 18 C -0.12 -0.03 5.42 -104.67 -0.57 -0.60 16 19 C -0.07 0.09 2.81 36.00 0.10 0.19 16 20 O -0.54 0.12 12.74 -35.23 -0.45 -0.33 16 21 Si 0.68 -1.27 29.77 -169.99 -5.06 -6.33 16 22 C -0.02 -0.01 9.09 -39.20 -0.36 -0.37 16 23 C -0.13 0.17 5.39 -26.73 -0.14 0.03 16 24 C -0.11 0.06 5.16 -26.73 -0.14 -0.07 16 25 H 0.22 -0.29 7.80 -54.09 -0.42 -0.71 16 26 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 27 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 28 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.40 -0.68 6.63 -40.82 -0.27 -0.95 16 31 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 32 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.06 -0.10 7.67 -51.93 -0.40 -0.50 16 34 H 0.14 -0.29 6.30 -52.48 -0.33 -0.62 16 35 H 0.13 -0.33 4.85 -52.49 -0.25 -0.59 16 36 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 37 H 0.38 -1.53 8.74 45.56 0.40 -1.13 16 38 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 39 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 40 H 0.13 -0.20 6.40 -52.49 -0.34 -0.53 16 41 H 0.07 -0.18 8.14 -51.92 -0.42 -0.60 16 42 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 44 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 361.30 15.07 5.44 5.44 Total: 0.00 -9.20 361.30 -9.55 -18.75 By element: Atomic # 1 Polarization: -4.24 SS G_CDS: -6.24 Total: -10.49 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -2.37 Total: -0.58 kcal Atomic # 7 Polarization: -0.55 SS G_CDS: -0.28 Total: -0.83 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -1.04 Total: -5.97 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.06 Total: -6.33 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -9.20 -9.55 -18.75 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_12496546.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.883 kcal (2) G-P(sol) polarization free energy of solvation -9.199 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.082 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.549 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.748 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.631 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds