Wall clock time and date at job start Tue Mar 9 2021 13:11:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 H 1.09007 * 109.46776 * 90.75293 * 3 2 1 5 5 C 1.52998 * 109.47086 * 210.75310 * 3 2 1 6 6 C 1.53006 * 109.47045 * 180.02562 * 5 3 2 7 7 C 1.52998 * 109.46938 * 300.00048 * 6 5 3 8 8 H 1.09002 * 109.47283 * 300.00171 * 7 6 5 9 9 N 1.46496 * 109.47246 * 180.02562 * 7 6 5 10 10 C 1.34777 * 120.00258 * 155.00083 * 9 7 6 11 11 O 1.21279 * 120.00166 * 359.97438 * 10 9 7 12 12 C 1.50706 * 119.99762 * 179.97438 * 10 9 7 13 13 N 1.46500 * 109.46949 * 179.97438 * 12 10 9 14 14 C 1.35034 * 125.93526 * 124.99550 * 13 12 10 15 15 C 1.35084 * 107.98554 * 179.97438 * 14 13 12 16 16 C 1.50698 * 126.07644 * 180.02562 * 15 14 13 17 17 O 1.42905 * 109.47060 * 254.97680 * 16 15 14 18 18 Si 1.86298 * 109.47360 * 14.97424 * 16 15 14 19 19 C 1.40843 * 107.84538 * 0.02562 * 15 14 13 20 20 C 1.48422 * 126.03551 * 180.02562 * 19 15 14 21 21 C 1.39322 * 120.12333 * 324.72482 * 20 19 15 22 22 C 1.38019 * 119.87951 * 179.76446 * 21 20 19 23 23 C 1.38314 * 120.11791 * 0.48769 * 22 21 20 24 24 C 1.38319 * 120.24761 * 359.78792 * 23 22 21 25 25 C 1.38025 * 120.11449 * 359.95631 * 24 23 22 26 26 N 1.31620 * 107.92746 * 359.71792 * 19 15 14 27 27 C 1.52998 * 109.47292 * 60.00103 * 7 6 5 28 28 C 1.52998 * 109.47293 * 330.75600 * 3 2 1 29 29 H 4.18740 * 15.04023 * 359.97438 * 4 2 1 30 30 H 1.08994 * 109.47090 * 60.00172 * 5 3 2 31 31 H 1.09001 * 109.47093 * 300.00140 * 5 3 2 32 32 H 1.08997 * 109.47258 * 180.02562 * 6 5 3 33 33 H 1.09000 * 109.47309 * 59.99450 * 6 5 3 34 34 H 0.96999 * 119.99694 * 334.99473 * 9 7 6 35 35 H 1.09000 * 109.47318 * 299.99141 * 12 10 9 36 36 H 1.09000 * 109.47161 * 59.99772 * 12 10 9 37 37 H 1.08007 * 126.00495 * 0.02562 * 14 13 12 38 38 H 1.08990 * 109.47340 * 134.98139 * 16 15 14 39 39 H 0.96701 * 114.00231 * 180.02562 * 17 16 15 40 40 H 1.48504 * 110.00183 * 178.68062 * 18 16 15 41 41 H 1.48500 * 110.00063 * 300.00412 * 18 16 15 42 42 H 1.08005 * 120.05536 * 359.97438 * 21 20 19 43 43 H 1.08001 * 119.93906 * 180.27723 * 22 21 20 44 44 H 1.08004 * 119.87808 * 179.76554 * 23 22 21 45 45 H 1.07995 * 119.94719 * 179.97438 * 24 23 22 46 46 H 1.08007 * 120.05950 * 180.02562 * 25 24 23 47 47 H 1.08994 * 109.47090 * 60.00118 * 27 7 6 48 48 H 1.09001 * 109.47093 * 180.02562 * 27 7 6 49 49 H 1.08994 * 109.46957 * 299.99873 * 28 3 2 50 50 H 1.09003 * 109.47467 * 60.00287 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0093 0.0143 -1.0277 5 6 3.1554 1.2405 0.7376 6 6 4.6855 1.2415 0.7370 7 6 5.1965 -0.0169 1.4414 8 1 4.8335 -0.0308 2.4691 9 7 6.6615 -0.0157 1.4415 10 6 7.3359 -0.6974 2.3885 11 8 6.7301 -1.3115 3.2409 12 6 8.8430 -0.6966 2.3881 13 7 9.3320 -1.5029 3.5091 14 6 10.1879 -2.5438 3.4227 15 6 10.3922 -3.0206 4.6700 16 6 11.2786 -4.1810 5.0423 17 8 10.4702 -5.3187 5.3494 18 14 12.4040 -4.5862 3.6140 19 6 9.6294 -2.2404 5.5606 20 6 9.5568 -2.4154 7.0326 21 6 9.6096 -3.6919 7.5884 22 6 9.5466 -3.8485 8.9583 23 6 9.4212 -2.7418 9.7783 24 6 9.3626 -1.4726 9.2316 25 6 9.4300 -1.3041 7.8634 26 7 8.9974 -1.3245 4.8576 27 6 4.6871 -1.2567 0.7038 28 6 3.1566 -1.2577 0.7047 29 1 -1.0500 -0.0005 0.0001 30 1 2.7921 1.2268 1.7651 31 1 2.7916 2.1370 0.2355 32 1 5.0484 2.1246 1.2629 33 1 5.0485 1.2553 -0.2907 34 1 7.1460 0.4757 0.7598 35 1 9.2063 -1.1184 1.4510 36 1 9.2058 0.3261 2.4910 37 1 10.6318 -2.9272 2.5157 38 1 11.8779 -3.9156 5.9132 39 1 10.9755 -6.1045 5.5987 40 1 13.3052 -5.7083 3.9799 41 1 11.5989 -4.9498 2.4204 42 1 9.7030 -4.5570 6.9486 43 1 9.5919 -4.8373 9.3904 44 1 9.3685 -2.8691 10.8495 45 1 9.2643 -0.6119 9.8765 46 1 9.3846 -0.3126 7.4375 47 1 5.0501 -1.2428 -0.3238 48 1 5.0508 -2.1532 1.2059 49 1 2.7933 -1.2714 1.7322 50 1 2.7937 -2.1411 0.1792 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_12622748.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:11 Heat of formation + Delta-G solvation = 93.797458 kcal Electronic energy + Delta-G solvation = -32089.335159 eV Core-core repulsion = 27858.152329 eV Total energy + Delta-G solvation = -4231.182830 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.173 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.37221 -41.07490 -39.67654 -39.29676 -37.82238 -35.88264 -34.74387 -33.53130 -32.27882 -31.94298 -31.72370 -31.34150 -30.24738 -28.45650 -25.87596 -24.51102 -23.88184 -23.54201 -23.26250 -21.68546 -21.44346 -21.21372 -20.59387 -19.07843 -18.49024 -18.43696 -18.28882 -17.60371 -16.98132 -16.64409 -16.28848 -16.07276 -15.79051 -15.75122 -15.54145 -15.33320 -15.12923 -15.03961 -14.75094 -14.46939 -14.21580 -14.13702 -14.03173 -13.90042 -13.58412 -13.51673 -13.34939 -13.24586 -12.79417 -12.74411 -12.37184 -12.29773 -12.26616 -11.97738 -11.94620 -11.72983 -11.69094 -11.33530 -11.12611 -10.97645 -10.91205 -10.49850 -10.29999 -10.13723 -9.64120 -9.58000 -9.11253 -4.96565 0.30135 0.71284 0.86192 1.28261 1.35525 1.50549 1.59031 1.87163 1.91928 1.94710 1.98185 2.03324 3.09253 3.28601 3.36332 3.48288 3.56371 3.59608 3.65456 3.69155 3.82515 3.88424 4.00779 4.05727 4.13948 4.14230 4.22731 4.28045 4.30992 4.33483 4.35682 4.41258 4.50327 4.59242 4.63123 4.68037 4.80296 4.89924 4.92504 4.95356 4.96860 5.01634 5.06274 5.16280 5.19793 5.20923 5.29489 5.37795 5.40174 5.49410 5.79805 5.82704 5.84859 5.91366 6.26232 6.34665 6.52989 6.73519 6.77321 7.11692 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.187 4.187 3 C 0.020 3.980 4 H 0.093 0.907 5 C -0.107 4.107 6 C -0.125 4.125 7 C 0.146 3.854 8 H 0.091 0.909 9 N -0.727 5.727 10 C 0.498 3.502 11 O -0.501 6.501 12 C 0.116 3.884 13 N -0.358 5.358 14 C 0.066 3.934 15 C -0.204 4.204 16 C -0.036 4.036 17 O -0.533 6.533 18 Si 0.683 3.317 19 C 0.133 3.867 20 C -0.018 4.018 21 C -0.102 4.102 22 C -0.126 4.126 23 C -0.113 4.113 24 C -0.126 4.126 25 C -0.091 4.091 26 N -0.250 5.250 27 C -0.128 4.128 28 C -0.108 4.108 29 H 0.217 0.783 30 H 0.071 0.929 31 H 0.074 0.926 32 H 0.075 0.925 33 H 0.073 0.927 34 H 0.401 0.599 35 H 0.128 0.872 36 H 0.119 0.881 37 H 0.178 0.822 38 H 0.075 0.925 39 H 0.377 0.623 40 H -0.259 1.259 41 H -0.255 1.255 42 H 0.152 0.848 43 H 0.124 0.876 44 H 0.122 0.878 45 H 0.124 0.876 46 H 0.124 0.876 47 H 0.068 0.932 48 H 0.071 0.929 49 H 0.070 0.930 50 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.530 2.978 -4.859 7.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C -0.187 4.187 3 C 0.002 3.998 4 H 0.111 0.889 5 C -0.145 4.145 6 C -0.163 4.163 7 C 0.041 3.959 8 H 0.109 0.891 9 N -0.380 5.380 10 C 0.281 3.719 11 O -0.373 6.373 12 C -0.009 4.009 13 N -0.140 5.140 14 C -0.079 4.079 15 C -0.216 4.216 16 C -0.147 4.147 17 O -0.340 6.340 18 Si 0.584 3.416 19 C -0.033 4.033 20 C -0.020 4.020 21 C -0.121 4.121 22 C -0.144 4.144 23 C -0.131 4.131 24 C -0.144 4.144 25 C -0.110 4.110 26 N -0.070 5.070 27 C -0.167 4.167 28 C -0.146 4.146 29 H 0.234 0.766 30 H 0.090 0.910 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.091 0.909 34 H 0.235 0.765 35 H 0.146 0.854 36 H 0.137 0.863 37 H 0.195 0.805 38 H 0.093 0.907 39 H 0.225 0.775 40 H -0.184 1.184 41 H -0.180 1.180 42 H 0.169 0.831 43 H 0.142 0.858 44 H 0.140 0.860 45 H 0.142 0.858 46 H 0.142 0.858 47 H 0.086 0.914 48 H 0.090 0.910 49 H 0.089 0.911 50 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 3.028 3.427 -5.081 6.835 hybrid contribution 0.084 -1.350 0.136 1.360 sum 3.112 2.077 -4.944 6.200 Atomic orbital electron populations 1.24988 0.96016 1.00224 1.00690 1.22987 0.94234 1.00828 1.00657 1.18362 0.84522 0.96048 1.00822 0.88923 1.21499 0.94243 0.97287 1.01495 1.21812 0.95958 0.97235 1.01297 1.21041 0.78559 0.94973 1.01289 0.89104 1.45977 1.07412 1.53183 1.31451 1.20548 0.89561 0.79897 0.81859 1.90848 1.69288 1.41134 1.36066 1.21512 0.93015 0.98299 0.88090 1.47774 1.35189 1.25437 1.05567 1.22189 0.95311 0.91075 0.99286 1.19228 1.08505 1.02021 0.91830 1.23965 0.97209 0.85480 1.08021 1.86583 1.36359 1.21930 1.89153 0.95224 0.80324 0.88016 0.78069 1.20615 0.95423 0.93982 0.93318 1.17783 1.02592 0.93880 0.87717 1.21887 0.97216 0.97493 0.95532 1.21118 1.01021 0.98870 0.93415 1.21281 0.99122 0.92764 0.99958 1.21083 1.01047 0.97496 0.94787 1.21227 0.98180 0.98309 0.93327 1.77775 1.20697 1.22661 0.85852 1.21931 0.95329 0.98513 1.00914 1.21524 0.94732 0.96881 1.01490 0.76597 0.91016 0.90712 0.90611 0.90881 0.76471 0.85415 0.86331 0.80511 0.90718 0.77503 1.18421 1.17958 0.83123 0.85840 0.86022 0.85815 0.85818 0.91362 0.91016 0.91116 0.91022 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.28 19.25 29.55 0.57 0.29 16 2 C -0.19 -0.34 12.56 -37.12 -0.47 -0.80 16 3 C 0.02 -0.01 2.56 -93.41 -0.24 -0.25 16 4 H 0.09 -0.12 8.14 -51.92 -0.42 -0.55 16 5 C -0.11 0.14 5.16 -26.73 -0.14 0.01 16 6 C -0.13 0.34 5.39 -26.73 -0.14 0.20 16 7 C 0.15 -0.13 2.45 -67.93 -0.17 -0.29 16 8 H 0.09 0.18 7.58 -51.93 -0.39 -0.22 16 9 N -0.73 1.57 5.08 -53.81 -0.27 1.30 16 10 C 0.50 0.50 7.82 -10.98 -0.09 0.42 16 11 O -0.50 -3.35 15.38 5.56 0.09 -3.26 16 12 C 0.12 -0.23 6.98 -5.19 -0.04 -0.27 16 13 N -0.36 -0.84 3.40 -62.58 -0.21 -1.05 16 14 C 0.07 0.08 9.96 -17.26 -0.17 -0.09 16 15 C -0.20 -0.61 5.37 -104.76 -0.56 -1.17 16 16 C -0.04 -0.02 2.00 36.00 0.07 0.05 16 17 O -0.53 -0.75 10.08 -35.23 -0.35 -1.10 16 18 Si 0.68 -0.86 30.78 -169.99 -5.23 -6.09 16 19 C 0.13 0.71 6.74 -82.78 -0.56 0.15 16 20 C -0.02 -0.09 5.80 -104.89 -0.61 -0.70 16 21 C -0.10 -0.40 8.94 -39.26 -0.35 -0.75 16 22 C -0.13 -0.33 10.03 -39.63 -0.40 -0.72 16 23 C -0.11 -0.26 10.04 -39.52 -0.40 -0.65 16 24 C -0.13 -0.35 10.03 -39.63 -0.40 -0.74 16 25 C -0.09 -0.38 9.75 -39.25 -0.38 -0.76 16 26 N -0.25 -1.47 11.65 33.43 0.39 -1.08 16 27 C -0.13 0.06 5.50 -26.71 -0.15 -0.08 16 28 C -0.11 0.00 5.16 -26.71 -0.14 -0.14 16 29 H 0.22 -0.33 7.80 -54.09 -0.42 -0.75 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 33 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 34 H 0.40 -2.28 8.60 -40.82 -0.35 -2.63 16 35 H 0.13 -0.78 8.07 -51.93 -0.42 -1.20 16 36 H 0.12 -0.52 8.14 -51.93 -0.42 -0.95 16 37 H 0.18 -0.40 6.36 -52.48 -0.33 -0.73 16 38 H 0.07 -0.01 7.84 -51.93 -0.41 -0.42 16 39 H 0.38 -1.05 8.74 45.56 0.40 -0.65 16 40 H -0.26 -0.22 7.11 56.52 0.40 0.19 16 41 H -0.25 -0.29 7.04 56.52 0.40 0.11 16 42 H 0.15 0.53 4.52 -52.48 -0.24 0.29 16 43 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 44 H 0.12 0.02 8.06 -52.48 -0.42 -0.40 16 45 H 0.12 0.09 8.06 -52.49 -0.42 -0.34 16 46 H 0.12 0.45 8.06 -52.48 -0.42 0.03 16 47 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 48 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 49 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 50 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 LS Contribution 415.18 15.07 6.26 6.26 Total: 0.00 -12.48 415.18 -11.37 -23.85 By element: Atomic # 1 Polarization: -5.22 SS G_CDS: -7.29 Total: -12.50 kcal Atomic # 6 Polarization: -1.58 SS G_CDS: -4.75 Total: -6.32 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -0.10 Total: -0.83 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -0.27 Total: -4.36 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.23 Total: -6.09 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -12.48 -11.37 -23.85 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_12622748.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.650 kcal (2) G-P(sol) polarization free energy of solvation -12.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 105.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.852 kcal (6) G-S(sol) free energy of system = (1) + (5) 93.797 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds