Wall clock time and date at job start Tue Mar 9 2021 13:11:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 H 1.09001 * 109.47036 * 218.45450 * 3 2 1 5 5 C 1.52997 * 109.47450 * 338.45703 * 3 2 1 6 6 C 1.52996 * 109.47279 * 180.02562 * 5 3 2 7 7 C 1.53001 * 109.47152 * 300.00014 * 6 5 3 8 8 H 1.09001 * 109.46870 * 299.99939 * 7 6 5 9 9 N 1.46499 * 109.47245 * 180.02562 * 7 6 5 10 10 C 1.34781 * 120.00040 * 84.99601 * 9 7 6 11 11 O 1.21628 * 119.99671 * 0.02562 * 10 9 7 12 12 C 1.47293 * 119.99895 * 180.02562 * 10 9 7 13 13 C 1.40365 * 120.04235 * 180.02562 * 12 10 9 14 14 O 1.35679 * 120.14174 * 0.02562 * 13 12 10 15 15 C 1.38327 * 119.72357 * 179.72549 * 13 12 10 16 16 C 1.39563 * 119.80855 * 0.52645 * 15 13 12 17 17 C 1.47569 * 119.95441 * 179.72634 * 16 15 13 18 18 C 1.36109 * 125.94733 * 179.72557 * 17 16 15 19 19 C 1.40795 * 106.73337 * 180.24168 * 18 17 16 20 20 C 1.34832 * 107.04964 * 359.60553 * 19 18 17 21 21 C 1.50703 * 125.65080 * 180.14040 * 20 19 18 22 22 O 1.42898 * 109.47270 * 65.27787 * 21 20 19 23 23 Si 1.86303 * 109.47105 * 185.27311 * 21 20 19 24 24 O 1.34226 * 108.69723 * 0.39803 * 20 19 18 25 25 C 1.39963 * 120.09136 * 359.45008 * 16 15 13 26 26 C 1.36384 * 120.27969 * 0.29363 * 25 16 15 27 27 C 1.52997 * 109.47041 * 59.99840 * 7 6 5 28 28 C 1.52996 * 109.47279 * 300.00083 * 27 7 6 29 29 H 4.18742 * 15.03773 * 359.97438 * 4 2 1 30 30 H 1.09002 * 109.46617 * 300.00411 * 5 3 2 31 31 H 1.09001 * 109.47208 * 59.99852 * 5 3 2 32 32 H 1.08996 * 109.47027 * 179.97438 * 6 5 3 33 33 H 1.09001 * 109.47183 * 59.99762 * 6 5 3 34 34 H 0.96996 * 119.99953 * 265.00099 * 9 7 6 35 35 H 0.96699 * 113.99887 * 90.00199 * 14 13 12 36 36 H 1.08001 * 120.09520 * 180.27322 * 15 13 12 37 37 H 1.08002 * 126.62860 * 359.97242 * 18 17 16 38 38 H 1.08005 * 126.47526 * 179.74314 * 19 18 17 39 39 H 1.08995 * 109.47549 * 305.27249 * 21 20 19 40 40 H 0.96702 * 114.00045 * 59.99417 * 22 21 20 41 41 H 1.48500 * 110.00258 * 179.97438 * 23 21 20 42 42 H 1.48500 * 110.00280 * 301.32368 * 23 21 20 43 43 H 1.08003 * 119.85708 * 180.27548 * 25 16 15 44 44 H 1.07994 * 119.90847 * 179.97438 * 26 25 16 45 45 H 1.09001 * 109.47208 * 60.00306 * 27 7 6 46 46 H 1.08999 * 109.46718 * 180.02562 * 27 7 6 47 47 H 1.09000 * 109.46958 * 180.02562 * 28 27 7 48 48 H 1.09001 * 109.47183 * 300.00238 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0090 0.8056 0.6391 5 6 3.1567 -1.3408 0.5297 6 6 4.6866 -1.3398 0.5302 7 6 5.1971 -1.1271 -0.8964 8 1 4.8345 -1.9320 -1.5357 9 7 6.6620 -1.1268 -0.8959 10 6 7.3362 -2.2918 -0.9664 11 8 6.7283 -3.3432 -1.0308 12 6 8.8092 -2.2915 -0.9653 13 6 9.5122 -3.5041 -1.0392 14 8 8.8379 -4.6792 -1.1122 15 6 10.8954 -3.4958 -1.0435 16 6 11.5822 -2.2834 -0.9634 17 6 13.0578 -2.2712 -0.9616 18 6 13.8476 -1.1648 -0.8936 19 6 15.1809 -1.6159 -0.9259 20 6 15.1413 -2.9615 -1.0023 21 6 16.3395 -3.8738 -1.0571 22 8 17.0631 -3.7843 0.1719 23 14 15.7721 -5.6292 -1.3171 24 8 13.8578 -3.3534 -1.0270 25 6 10.8733 -1.0788 -0.8904 26 6 9.5094 -1.0824 -0.8912 27 6 4.6864 0.2143 -1.4260 28 6 3.1564 0.2133 -1.4266 29 1 -1.0500 -0.0004 -0.0009 30 1 2.7933 -1.4921 1.5461 31 1 2.7937 -2.1457 -0.1094 32 1 5.0504 -2.2953 0.9080 33 1 5.0492 -0.5349 1.1696 34 1 7.1468 -0.2883 -0.8448 35 1 8.6434 -4.9656 -2.0152 36 1 11.4424 -4.4250 -1.1046 37 1 13.5156 -0.1389 -0.8317 38 1 16.0679 -1.0005 -0.8933 39 1 16.9862 -3.5752 -1.8821 40 1 16.5481 -4.0360 0.9507 41 1 16.9445 -6.5389 -1.3736 42 1 14.8640 -6.0380 -0.2154 43 1 11.4086 -0.1426 -0.8330 44 1 8.9685 -0.1495 -0.8343 45 1 5.0490 1.0192 -0.7867 46 1 5.0497 0.3656 -2.4425 47 1 2.7927 1.1689 -1.8044 48 1 2.7938 -0.5916 -2.0660 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_12807986.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:18 Heat of formation + Delta-G solvation = -15.188705 kcal Electronic energy + Delta-G solvation = -31674.705277 eV Core-core repulsion = 27243.359128 eV Total energy + Delta-G solvation = -4431.346149 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.150 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -43.76568 -41.63219 -40.35791 -38.99389 -38.21031 -37.84713 -35.77876 -34.32095 -33.87814 -33.04964 -31.91249 -31.36646 -30.73308 -29.74438 -27.06375 -24.87570 -24.13787 -23.85509 -23.69368 -22.41485 -21.81352 -21.34804 -21.18985 -19.73637 -19.06527 -18.79652 -18.56822 -17.70233 -17.55698 -17.46017 -16.65474 -16.50368 -16.26198 -16.07535 -15.86924 -15.77026 -15.46828 -15.35715 -15.17415 -14.81461 -14.41638 -14.29260 -14.05739 -14.01367 -13.94418 -13.79870 -13.62311 -13.51620 -13.31005 -12.97365 -12.78598 -12.74532 -12.33315 -12.22903 -12.07626 -11.91855 -11.83891 -11.65122 -11.16079 -10.97793 -10.90204 -10.86092 -10.72932 -10.64639 -10.07037 -9.97782 -9.04489 -5.02599 -0.80511 0.08778 0.63298 1.08009 1.41003 1.42799 1.68202 1.89525 1.93413 1.96019 1.97735 2.05477 2.62815 2.99463 3.11893 3.30774 3.35114 3.49811 3.54672 3.66040 3.70135 3.81899 3.87910 3.91531 4.03558 4.07818 4.14054 4.18299 4.28130 4.33289 4.35556 4.37426 4.39161 4.54511 4.62330 4.65203 4.65787 4.74393 4.80268 4.92638 4.97029 4.99142 5.04258 5.06497 5.10661 5.14888 5.18792 5.25673 5.33437 5.35328 5.43082 5.48860 5.92131 6.19434 6.45569 6.67647 6.74865 7.22975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.186 4.186 3 C 0.020 3.980 4 H 0.093 0.907 5 C -0.108 4.108 6 C -0.130 4.130 7 C 0.145 3.855 8 H 0.092 0.908 9 N -0.726 5.726 10 C 0.559 3.441 11 O -0.516 6.516 12 C -0.165 4.165 13 C 0.179 3.821 14 O -0.474 6.474 15 C -0.141 4.141 16 C 0.030 3.970 17 C 0.023 3.977 18 C -0.177 4.177 19 C -0.173 4.173 20 C -0.044 4.044 21 C -0.034 4.034 22 O -0.520 6.520 23 Si 0.697 3.303 24 O -0.162 6.162 25 C -0.116 4.116 26 C -0.064 4.064 27 C -0.126 4.126 28 C -0.107 4.107 29 H 0.217 0.783 30 H 0.071 0.929 31 H 0.070 0.930 32 H 0.074 0.926 33 H 0.067 0.933 34 H 0.398 0.602 35 H 0.399 0.601 36 H 0.144 0.856 37 H 0.156 0.844 38 H 0.156 0.844 39 H 0.138 0.862 40 H 0.381 0.619 41 H -0.247 1.247 42 H -0.255 1.255 43 H 0.139 0.861 44 H 0.136 0.864 45 H 0.072 0.928 46 H 0.075 0.925 47 H 0.074 0.926 48 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.699 4.782 -2.988 5.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.186 4.186 3 C 0.002 3.998 4 H 0.111 0.889 5 C -0.146 4.146 6 C -0.168 4.168 7 C 0.041 3.959 8 H 0.110 0.890 9 N -0.378 5.378 10 C 0.346 3.654 11 O -0.392 6.392 12 C -0.169 4.169 13 C 0.132 3.868 14 O -0.286 6.286 15 C -0.159 4.159 16 C 0.029 3.971 17 C -0.026 4.026 18 C -0.196 4.196 19 C -0.192 4.192 20 C -0.094 4.094 21 C -0.144 4.144 22 O -0.327 6.327 23 Si 0.596 3.404 24 O -0.059 6.059 25 C -0.134 4.134 26 C -0.083 4.083 27 C -0.164 4.164 28 C -0.145 4.145 29 H 0.234 0.766 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.092 0.908 33 H 0.086 0.914 34 H 0.233 0.767 35 H 0.258 0.742 36 H 0.161 0.839 37 H 0.174 0.826 38 H 0.173 0.827 39 H 0.156 0.844 40 H 0.229 0.771 41 H -0.172 1.172 42 H -0.179 1.179 43 H 0.156 0.844 44 H 0.154 0.846 45 H 0.091 0.909 46 H 0.094 0.906 47 H 0.092 0.908 48 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.639 3.085 -2.531 4.041 hybrid contribution 0.151 1.102 0.791 1.364 sum 0.790 4.187 -1.740 4.602 Atomic orbital electron populations 1.24981 0.96012 1.00603 1.00445 1.22996 0.94234 1.00647 1.00721 1.18370 0.84479 0.99145 0.97830 0.88942 1.21514 0.94788 0.96212 1.02057 1.21938 0.95205 1.03088 0.96580 1.21039 0.78677 0.98858 0.97331 0.89010 1.45994 1.07278 1.08668 1.75851 1.17972 0.86662 0.83996 0.76734 1.90851 1.69507 1.30719 1.48144 1.20506 0.93684 0.93913 1.08765 1.18292 0.89015 0.84929 0.94583 1.84777 1.76026 1.34709 1.33044 1.21599 0.93345 0.98518 1.02477 1.17755 0.86911 0.93709 0.98705 1.20332 0.89940 0.84558 1.07799 1.21911 0.92449 0.99293 1.05991 1.21584 0.98218 0.93793 1.05604 1.22939 0.83304 0.95475 1.07680 1.24355 0.90393 1.09026 0.90617 1.86665 1.40581 1.89595 1.15874 0.94484 0.81733 0.73494 0.90669 1.83950 1.15977 1.34698 1.71255 1.20702 0.93826 0.97164 1.01729 1.20814 0.93952 0.96835 0.96711 1.21820 0.95965 0.96512 1.02122 1.21492 0.94225 1.03153 0.95584 0.76623 0.91033 0.91087 0.90767 0.91423 0.76656 0.74233 0.83865 0.82616 0.82671 0.84415 0.77072 1.17164 1.17880 0.84364 0.84592 0.90943 0.90640 0.90767 0.91007 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.24 19.25 29.55 0.57 0.33 16 2 C -0.19 -0.29 12.56 -37.12 -0.47 -0.76 16 3 C 0.02 -0.01 2.56 -93.41 -0.24 -0.25 16 4 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 5 C -0.11 0.02 5.16 -26.73 -0.14 -0.12 16 6 C -0.13 0.04 5.49 -26.73 -0.15 -0.10 16 7 C 0.15 -0.12 2.45 -67.93 -0.17 -0.28 16 8 H 0.09 0.11 7.57 -51.93 -0.39 -0.28 16 9 N -0.73 0.80 5.03 -54.92 -0.28 0.52 16 10 C 0.56 1.09 7.72 -12.58 -0.10 1.00 16 11 O -0.52 -2.89 14.80 -16.71 -0.25 -3.14 16 12 C -0.16 -0.12 5.89 -104.79 -0.62 -0.74 16 13 C 0.18 0.29 6.71 -38.75 -0.26 0.03 16 14 O -0.47 -1.14 11.56 -40.70 -0.47 -1.61 16 15 C -0.14 -0.11 9.65 -39.05 -0.38 -0.49 16 16 C 0.03 0.01 5.87 -104.95 -0.62 -0.61 16 17 C 0.02 0.02 7.02 -36.54 -0.26 -0.24 16 18 C -0.18 0.03 10.26 -39.38 -0.40 -0.37 16 19 C -0.17 -0.04 10.78 -39.82 -0.43 -0.47 16 20 C -0.04 -0.02 6.21 -35.51 -0.22 -0.24 16 21 C -0.03 0.03 2.98 36.01 0.11 0.14 16 22 O -0.52 -0.20 12.88 -35.23 -0.45 -0.66 16 23 Si 0.70 -0.65 32.11 -169.99 -5.46 -6.11 16 24 O -0.16 -0.20 8.79 4.72 0.04 -0.16 16 25 C -0.12 0.20 9.48 -39.60 -0.38 -0.17 16 26 C -0.06 0.13 9.47 -39.62 -0.38 -0.25 16 27 C -0.13 0.34 5.39 -26.73 -0.14 0.20 16 28 C -0.11 0.17 5.16 -26.73 -0.14 0.03 16 29 H 0.22 -0.38 7.80 -54.09 -0.42 -0.80 16 30 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 34 H 0.40 -1.55 6.61 -40.82 -0.27 -1.82 16 35 H 0.40 -0.57 9.06 45.56 0.41 -0.16 16 36 H 0.14 0.03 7.90 -52.49 -0.41 -0.38 16 37 H 0.16 -0.40 7.24 -52.49 -0.38 -0.78 16 38 H 0.16 -0.15 8.06 -52.48 -0.42 -0.57 16 39 H 0.14 -0.33 7.96 -51.93 -0.41 -0.75 16 40 H 0.38 -0.83 8.70 45.56 0.40 -0.44 16 41 H -0.25 -0.39 7.11 56.52 0.40 0.02 16 42 H -0.25 -0.49 7.11 56.52 0.40 -0.08 16 43 H 0.14 -0.56 6.95 -52.48 -0.36 -0.92 16 44 H 0.14 -0.70 6.38 -52.49 -0.33 -1.03 16 45 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 46 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 47 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 48 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 LS Contribution 406.96 15.07 6.13 6.13 Total: 0.00 -9.78 406.96 -11.13 -20.91 By element: Atomic # 1 Polarization: -6.92 SS G_CDS: -5.61 Total: -12.53 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -4.79 Total: -3.36 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -0.28 Total: 0.52 kcal Atomic # 8 Polarization: -4.44 SS G_CDS: -1.13 Total: -5.57 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.46 Total: -6.11 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -9.78 -11.13 -20.91 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_12807986.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.724 kcal (2) G-P(sol) polarization free energy of solvation -9.782 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.131 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.913 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.189 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds